RNA–Protein interactions for RNA: ENST00000550543.1

TPCN1-213, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-213ENST00000550543 COL13A1Q5TAT6 717 aaPredicted RBP18.67■□□□□ 0.58
TPCN1-213ENST00000550543 CLEC11AQ9Y240 323 aa18.67■□□□□ 0.58
TPCN1-213ENST00000550543 TMEM88BA6NKF7 163 aa18.66■□□□□ 0.58
TPCN1-213ENST00000550543 NUTM1Q86Y26 1132 aa18.66■□□□□ 0.58
TPCN1-213ENST00000550543 ZNF34Q8IZ26 560 aa18.66■□□□□ 0.58
TPCN1-213ENST00000550543 NLRP3Q96P20 1036 aa18.66■□□□□ 0.58
TPCN1-213ENST00000550543 ZBTB3Q9H5J0 574 aa18.66■□□□□ 0.58
TPCN1-213ENST00000550543 PASKQ96RG2 1323 aa18.66■□□□□ 0.58
TPCN1-213ENST00000550543 KDM3BQ7LBC6 1761 aa18.65■□□□□ 0.58
TPCN1-213ENST00000550543 GPTP24298 496 aa18.65■□□□□ 0.58
TPCN1-213ENST00000550543 TTLL7Q6ZT98 887 aa18.65■□□□□ 0.58
TPCN1-213ENST00000550543 SUPT20HQ8NEM7 779 aa18.65■□□□□ 0.58
TPCN1-213ENST00000550543 AIDAQ96BJ3 306 aa18.65■□□□□ 0.58
TPCN1-213ENST00000550543 ZNF541Q9H0D2 1346 aa18.65■□□□□ 0.58
TPCN1-213ENST00000550543 CNTNAP1P78357 1384 aa18.65■□□□□ 0.58
TPCN1-213ENST00000550543 ABCC12Q96J65 1359 aa18.65■□□□□ 0.58
TPCN1-213ENST00000550543 PPEF1O14829 653 aaPredicted RBP18.64■□□□□ 0.57
TPCN1-213ENST00000550543 RIPK4P57078 832 aa18.64■□□□□ 0.57
TPCN1-213ENST00000550543 LARGE2Q8N3Y3 721 aa18.64■□□□□ 0.57
TPCN1-213ENST00000550543 UTP14AQ9BVJ6 771 aaKnown RBP18.64■□□□□ 0.57
TPCN1-213ENST00000550543 CACNA1SQ13698 1873 aa18.63■□□□□ 0.57
TPCN1-213ENST00000550543 SUSD4Q5VX71 490 aa18.63■□□□□ 0.57
TPCN1-213ENST00000550543 NIM1KQ8IY84 436 aa18.63■□□□□ 0.57
TPCN1-213ENST00000550543 MKRN1Q9UHC7 482 aaKnown RBP18.63■□□□□ 0.57
TPCN1-213ENST00000550543 NTSR2O95665 410 aa18.62■□□□□ 0.57
TPCN1-213ENST00000550543 POTEIP0CG38 1075 aa18.62■□□□□ 0.57
TPCN1-213ENST00000550543 POTEJP0CG39 1038 aa18.62■□□□□ 0.57
TPCN1-213ENST00000550543 SLC10A5Q5PT55 438 aa18.62■□□□□ 0.57
TPCN1-213ENST00000550543 THUMPD2Q9BTF0 503 aaKnown RBP18.62■□□□□ 0.57
TPCN1-213ENST00000550543 UBN2Q6ZU65 1347 aa18.62■□□□□ 0.57
TPCN1-213ENST00000550543 BBOX1O75936 387 aa18.61■□□□□ 0.57
TPCN1-213ENST00000550543 ITGBL1O95965 494 aaPredicted RBP18.61■□□□□ 0.57
TPCN1-213ENST00000550543 TMC4Q7Z404 712 aa18.61■□□□□ 0.57
TPCN1-213ENST00000550543 CNTROBQ8N137 903 aa18.61■□□□□ 0.57
TPCN1-213ENST00000550543 EIF2S2P20042 333 aaKnown RBP18.6■□□□□ 0.57
TPCN1-213ENST00000550543 OLFM4Q6UX06 510 aa18.6■□□□□ 0.57
TPCN1-213ENST00000550543 ATP6V0A2Q9Y487 856 aa18.6■□□□□ 0.57
TPCN1-213ENST00000550543 SNED1Q8TER0 1413 aa18.59■□□□□ 0.57
TPCN1-213ENST00000550543 DLG5Q8TDM6 1919 aa18.59■□□□□ 0.57
TPCN1-213ENST00000550543 TMPOP42166 694 aaKnown RBP18.59■□□□□ 0.57
TPCN1-213ENST00000550543 USP50Q70EL3 339 aaPredicted RBP18.59■□□□□ 0.57
TPCN1-213ENST00000550543 PRDM10Q9NQV6 1147 aa18.59■□□□□ 0.57
TPCN1-213ENST00000550543 GJA3Q9Y6H8 435 aa18.59■□□□□ 0.57
TPCN1-213ENST00000550543 NUP98P52948 1817 aa18.58■□□□□ 0.57
TPCN1-213ENST00000550543 PPIP5K2O43314 1243 aa18.58■□□□□ 0.56
TPCN1-213ENST00000550543 HOXB7P09629 217 aa18.58■□□□□ 0.56
TPCN1-213ENST00000550543 CTCFP49711 727 aaPredicted RBP18.58■□□□□ 0.56
TPCN1-213ENST00000550543 MYBBP1AQ9BQG0 1328 aaKnown RBP18.57■□□□□ 0.56
TPCN1-213ENST00000550543 CDHR2Q9BYE9 1310 aa18.57■□□□□ 0.56
TPCN1-213ENST00000550543 RASSF10A6NK89 507 aa18.57■□□□□ 0.56
TPCN1-213ENST00000550543 WDR43Q15061 677 aaKnown RBP eCLIP18.57■□□□□ 0.56
TPCN1-213ENST00000550543 DDX46Q7L014 1031 aaKnown RBP18.57■□□□□ 0.56
TPCN1-213ENST00000550543 DDX21Q9NR30 783 aaKnown RBP eCLIP18.57■□□□□ 0.56
TPCN1-213ENST00000550543 MAP2K1Q02750 393 aaPredicted RBP18.56■□□□□ 0.56
TPCN1-213ENST00000550543 PDIA6Q15084 440 aa18.56■□□□□ 0.56
TPCN1-213ENST00000550543 DEFB115Q30KQ5 88 aa18.56■□□□□ 0.56
TPCN1-213ENST00000550543 CHMP4AQ9BY43 222 aa18.56■□□□□ 0.56
TPCN1-213ENST00000550543 SH3TC1Q8TE82 1336 aa18.55■□□□□ 0.56
TPCN1-213ENST00000550543 HSP90B1P14625 803 aaKnown RBP18.55■□□□□ 0.56
TPCN1-213ENST00000550543 ECE1P42892 770 aa18.55■□□□□ 0.56
TPCN1-213ENST00000550543 MAP1SQ66K74 1059 aaPredicted RBP18.55■□□□□ 0.56
TPCN1-213ENST00000550543 DPP8Q6V1X1 898 aaPredicted RBP18.55■□□□□ 0.56
TPCN1-213ENST00000550543 COPS6Q7L5N1 327 aa18.55■□□□□ 0.56
TPCN1-213ENST00000550543 LRP10Q7Z4F1 713 aa18.55■□□□□ 0.56
TPCN1-213ENST00000550543 SP8Q8IXZ3 490 aa18.55■□□□□ 0.56
TPCN1-213ENST00000550543 RTFDC1Q9BY42 306 aaPredicted RBP18.55■□□□□ 0.56
TPCN1-213ENST00000550543 ZNRF3Q9ULT6 936 aa18.55■□□□□ 0.56
TPCN1-213ENST00000550543 ABT1Q9ULW3 272 aaKnown RBP18.55■□□□□ 0.56
TPCN1-213ENST00000550543 VEGFBP49765 207 aa18.54■□□□□ 0.56
TPCN1-213ENST00000550543 TCIRG1Q13488 830 aa18.54■□□□□ 0.56
TPCN1-213ENST00000550543 TNIP1Q15025 636 aa18.54■□□□□ 0.56
TPCN1-213ENST00000550543 NLRP10Q86W26 655 aa18.54■□□□□ 0.56
TPCN1-213ENST00000550543 RUNDC1Q96C34 613 aa18.54■□□□□ 0.56
TPCN1-213ENST00000550543 ADARB2Q9NS39 739 aaKnown RBP18.54■□□□□ 0.56
TPCN1-213ENST00000550543 TRMT112Q9UI30 125 aaKnown RBP18.54■□□□□ 0.56
TPCN1-213ENST00000550543 ABCC4O15439 1325 aa18.53■□□□□ 0.56
TPCN1-213ENST00000550543 CHL1O00533 1208 aa18.53■□□□□ 0.56
TPCN1-213ENST00000550543 MPNDQ8N594 471 aa18.53■□□□□ 0.56
TPCN1-213ENST00000550543 XAGE3Q8WTP9 111 aa18.53■□□□□ 0.56
TPCN1-213ENST00000550543 ADAMTSL1Q8N6G6 1762 aa18.53■□□□□ 0.56
TPCN1-213ENST00000550543 TCERG1O14776 1098 aaKnown RBP18.52■□□□□ 0.56
TPCN1-213ENST00000550543 CAPN15O75808 1086 aa18.52■□□□□ 0.56
TPCN1-213ENST00000550543 SCNN1DP51172 638 aa18.52■□□□□ 0.56
TPCN1-213ENST00000550543 CALD1Q05682 793 aaKnown RBP18.52■□□□□ 0.56
TPCN1-213ENST00000550543 AIMP1Q12904 312 aaKnown RBP18.52■□□□□ 0.56
TPCN1-213ENST00000550543 GRAPQ13588 217 aa18.52■□□□□ 0.56
TPCN1-213ENST00000550543 GRAPLQ8TC17 118 aaPredicted RBP18.52■□□□□ 0.56
TPCN1-213ENST00000550543 BEGAINQ9BUH8 593 aa18.52■□□□□ 0.56
TPCN1-213ENST00000550543 DBF4Q9UBU7 674 aaPredicted RBP18.52■□□□□ 0.56
TPCN1-213ENST00000550543 KIAA2012Q0VF49 1180 aa18.51■□□□□ 0.55
TPCN1-213ENST00000550543 AOC3Q16853 763 aa18.51■□□□□ 0.55
TPCN1-213ENST00000550543 HDGFL1Q5TGJ6 251 aa18.51■□□□□ 0.55
TPCN1-213ENST00000550543 PLBD2Q8NHP8 589 aa18.51■□□□□ 0.55
TPCN1-213ENST00000550543 HYPKQ9NX55 129 aa18.51■□□□□ 0.55
TPCN1-213ENST00000550543 WBP1LQ9NX94 342 aa18.51■□□□□ 0.55
TPCN1-213ENST00000550543 GPRC5DQ9NZD1 345 aa18.51■□□□□ 0.55
TPCN1-213ENST00000550543 FOXN1O15353 648 aa18.5■□□□□ 0.55
TPCN1-213ENST00000550543 EPS15P42566 896 aa18.5■□□□□ 0.55
TPCN1-213ENST00000550543 PROSER3Q2NL68 480 aa18.5■□□□□ 0.55
TPCN1-213ENST00000550543 CIAPIN1Q6FI81 312 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms