RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 USP17L3A6NCW0 530 aa9.2□□□□□ -0.94
COX6A1-202ENST00000549525 USP17L4A6NCW7 530 aa9.2□□□□□ -0.94
COX6A1-202ENST00000549525 USP17L2Q6R6M4 530 aa9.2□□□□□ -0.94
COX6A1-202ENST00000549525 USP17L1Q7RTZ2 530 aa9.2□□□□□ -0.94
COX6A1-202ENST00000549525 PLEKHM2Q8IWE5 1019 aa9.2□□□□□ -0.94
COX6A1-202ENST00000549525 RNF217Q8TC41 542 aa9.2□□□□□ -0.94
COX6A1-202ENST00000549525 TFIP11Q9UBB9 837 aaKnown RBP9.2□□□□□ -0.94
COX6A1-202ENST00000549525 PLEKHG1Q9ULL1 1385 aa9.2□□□□□ -0.94
COX6A1-202ENST00000549525 LMTK3Q96Q04 1460 aa9.2□□□□□ -0.94
COX6A1-202ENST00000549525 PALM3A6NDB9 673 aaPredicted RBP9.19□□□□□ -0.94
COX6A1-202ENST00000549525 FIGNL2A6NMB9 653 aa9.19□□□□□ -0.94
COX6A1-202ENST00000549525 MEN1O00255 615 aa9.19□□□□□ -0.94
COX6A1-202ENST00000549525 MAN1A2O60476 641 aa9.19□□□□□ -0.94
COX6A1-202ENST00000549525 GNRH1P01148 92 aa9.19□□□□□ -0.94
COX6A1-202ENST00000549525 IL2RAP01589 272 aa9.19□□□□□ -0.94
COX6A1-202ENST00000549525 LTKP29376 864 aa9.19□□□□□ -0.94
COX6A1-202ENST00000549525 CLN3Q13286 438 aa9.19□□□□□ -0.94
COX6A1-202ENST00000549525 EML3Q32P44 896 aa9.19□□□□□ -0.94
COX6A1-202ENST00000549525 PPP1R12CQ9BZL4 782 aa9.19□□□□□ -0.94
COX6A1-202ENST00000549525 TBX22Q9Y458 520 aa9.19□□□□□ -0.94
COX6A1-202ENST00000549525 PCDHGA11Q9Y5H2 935 aa9.19□□□□□ -0.94
COX6A1-202ENST00000549525 MAFBQ9Y5Q3 323 aaPredicted RBP9.19□□□□□ -0.94
COX6A1-202ENST00000549525 MYOM2P54296 1465 aa9.19□□□□□ -0.94
COX6A1-202ENST00000549525 SCNN1DP51172 638 aa9.18□□□□□ -0.94
COX6A1-202ENST00000549525 HSPA2P54652 639 aa9.18□□□□□ -0.94
COX6A1-202ENST00000549525 ZNF775Q96BV0 537 aaPredicted RBP9.18□□□□□ -0.94
COX6A1-202ENST00000549525 SIRT1Q96EB6 747 aa9.18□□□□□ -0.94
COX6A1-202ENST00000549525 ETNK1Q9HBU6 452 aa9.18□□□□□ -0.94
COX6A1-202ENST00000549525 HRH3Q9Y5N1 445 aa9.18□□□□□ -0.94
COX6A1-202ENST00000549525 MED14O60244 1454 aa9.17□□□□□ -0.94
COX6A1-202ENST00000549525 PIK3R4Q99570 1358 aa9.17□□□□□ -0.94
COX6A1-202ENST00000549525 LZTS3O60299 673 aaPredicted RBP9.17□□□□□ -0.94
COX6A1-202ENST00000549525 RNF144AP50876 292 aaPredicted RBP9.17□□□□□ -0.94
COX6A1-202ENST00000549525 C14orf93Q9H972 538 aaKnown RBP9.17□□□□□ -0.94
COX6A1-202ENST00000549525 NEXMIFQ5QGS0 1516 aa9.16□□□□□ -0.94
COX6A1-202ENST00000549525 NPHP4O75161 1426 aaPredicted RBP9.16□□□□□ -0.94
COX6A1-202ENST00000549525 ADGRF5Q8IZF2 1346 aa9.16□□□□□ -0.94
COX6A1-202ENST00000549525 NOD1Q9Y239 953 aa9.16□□□□□ -0.94
COX6A1-202ENST00000549525 GTF2IP78347 998 aa9.15□□□□□ -0.94
COX6A1-202ENST00000549525 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.15□□□□□ -0.94
COX6A1-202ENST00000549525 CFAP70Q5T0N1 1121 aa9.15□□□□□ -0.94
COX6A1-202ENST00000549525 CNKSR1Q969H4 720 aa9.15□□□□□ -0.94
COX6A1-202ENST00000549525 XAGE2Q96GT9 111 aa9.15□□□□□ -0.94
COX6A1-202ENST00000549525 ESYT1Q9BSJ8 1104 aa9.15□□□□□ -0.94
COX6A1-202ENST00000549525 NRXN1Q9ULB1 1477 aa9.15□□□□□ -0.95
COX6A1-202ENST00000549525 PIK3C2GO75747 1445 aa9.14□□□□□ -0.95
COX6A1-202ENST00000549525 PRAG1Q86YV5 1406 aa9.14□□□□□ -0.95
COX6A1-202ENST00000549525 PPLO60437 1756 aa9.14□□□□□ -0.95
COX6A1-202ENST00000549525 ROCK2O75116 1388 aaKnown RBP9.14□□□□□ -0.95
COX6A1-202ENST00000549525 TMEM229AB2RXF0 380 aa9.14□□□□□ -0.95
COX6A1-202ENST00000549525 GPC1P35052 558 aa9.14□□□□□ -0.95
COX6A1-202ENST00000549525 CLDN10P78369 228 aa9.14□□□□□ -0.95
COX6A1-202ENST00000549525 NLRP3Q96P20 1036 aa9.14□□□□□ -0.95
COX6A1-202ENST00000549525 SLC26A8Q96RN1 970 aa9.14□□□□□ -0.95
COX6A1-202ENST00000549525 GRIP2Q9C0E4 1043 aa9.14□□□□□ -0.95
COX6A1-202ENST00000549525 KIAA1024Q9UPX6 916 aa9.14□□□□□ -0.95
COX6A1-202ENST00000549525 DIP2AQ14689 1571 aa9.14□□□□□ -0.95
COX6A1-202ENST00000549525 SETBP1Q9Y6X0 1596 aa9.13□□□□□ -0.95
COX6A1-202ENST00000549525 MYO5BQ9ULV0 1848 aa9.13□□□□□ -0.95
COX6A1-202ENST00000549525 GDF10P55107 478 aa9.13□□□□□ -0.95
COX6A1-202ENST00000549525 CENPCQ03188 943 aa9.13□□□□□ -0.95
COX6A1-202ENST00000549525 CARD11Q9BXL7 1154 aa9.13□□□□□ -0.95
COX6A1-202ENST00000549525 FHDC1Q9C0D6 1143 aaPredicted RBP9.13□□□□□ -0.95
COX6A1-202ENST00000549525 C1orf115Q9H7X2 142 aa9.13□□□□□ -0.95
COX6A1-202ENST00000549525 MKRN1Q9UHC7 482 aaKnown RBP9.13□□□□□ -0.95
COX6A1-202ENST00000549525 LAMC1P11047 1609 aa9.13□□□□□ -0.95
COX6A1-202ENST00000549525 EIF3AQ14152 1382 aaKnown RBP9.12□□□□□ -0.95
COX6A1-202ENST00000549525 WASLO00401 505 aaPredicted RBP9.12□□□□□ -0.95
COX6A1-202ENST00000549525 ZBTB7BO15156 539 aaPredicted RBP9.12□□□□□ -0.95
COX6A1-202ENST00000549525 INHAP05111 366 aa9.12□□□□□ -0.95
COX6A1-202ENST00000549525 KCNA6P17658 529 aa9.12□□□□□ -0.95
COX6A1-202ENST00000549525 VEGFBP49765 207 aa9.12□□□□□ -0.95
COX6A1-202ENST00000549525 PTSQ03393 145 aa9.12□□□□□ -0.95
COX6A1-202ENST00000549525 ESCO1Q5FWF5 840 aa9.12□□□□□ -0.95
COX6A1-202ENST00000549525 PRICKLE2Q7Z3G6 844 aa9.12□□□□□ -0.95
COX6A1-202ENST00000549525 POLR1AO95602 1720 aaPredicted RBP9.11□□□□□ -0.95
COX6A1-202ENST00000549525 SENP3-EIF4A1A0A087X0R7 540 aa9.11□□□□□ -0.95
COX6A1-202ENST00000549525 LMOD1P29536 600 aaPredicted RBP9.11□□□□□ -0.95
COX6A1-202ENST00000549525 LCE2CQ5TA81 110 aa9.11□□□□□ -0.95
COX6A1-202ENST00000549525 LYSMD3Q7Z3D4 306 aa9.11□□□□□ -0.95
COX6A1-202ENST00000549525 NXF1Q9UBU9 619 aaKnown RBP9.11□□□□□ -0.95
COX6A1-202ENST00000549525 IFT172Q9UG01 1749 aa9.11□□□□□ -0.95
COX6A1-202ENST00000549525 KIAA1210Q9ULL0 1709 aa9.11□□□□□ -0.95
COX6A1-202ENST00000549525 IQGAP1P46940 1657 aa9.1□□□□□ -0.95
COX6A1-202ENST00000549525 ALKQ9UM73 1620 aa9.1□□□□□ -0.95
COX6A1-202ENST00000549525 TERTO14746 1132 aaKnown RBP9.1□□□□□ -0.95
COX6A1-202ENST00000549525 DKK1O94907 266 aa9.1□□□□□ -0.95
COX6A1-202ENST00000549525 RHOQP17081 205 aa9.1□□□□□ -0.95
COX6A1-202ENST00000549525 NFX1Q12986 1120 aaKnown RBP9.1□□□□□ -0.95
COX6A1-202ENST00000549525 NBPF8Q3BBV2 869 aa9.1□□□□□ -0.95
COX6A1-202ENST00000549525 SLC27A3Q5K4L6 730 aa9.1□□□□□ -0.95
COX6A1-202ENST00000549525 TRIM50Q86XT4 487 aa9.1□□□□□ -0.95
COX6A1-202ENST00000549525 OGFOD1Q8N543 542 aa9.1□□□□□ -0.95
COX6A1-202ENST00000549525 POGKQ9P215 609 aa9.1□□□□□ -0.95
COX6A1-202ENST00000549525 AMOTL2Q9Y2J4 779 aa9.1□□□□□ -0.95
COX6A1-202ENST00000549525 ABCC11Q96J66 1382 aa9.1□□□□□ -0.95
COX6A1-202ENST00000549525 RALGAPBQ86X10 1494 aa9.09□□□□□ -0.95
COX6A1-202ENST00000549525 ADAMTS13Q76LX8 1427 aa9.09□□□□□ -0.95
COX6A1-202ENST00000549525 PSME1Q06323 249 aa9.09□□□□□ -0.95
COX6A1-202ENST00000549525 POU4F2Q12837 409 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms