RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 AEBP2Q6ZN18 517 aaPredicted RBP25.64■■□□□ 1.7
COX6A1-202ENST00000549525 CHIC1Q5VXU3 224 aa24.91■■□□□ 1.58
COX6A1-202ENST00000549525 PHF23Q9BUL5 403 aaPredicted RBP21.97■■□□□ 1.11
COX6A1-202ENST00000549525 SENP3Q9H4L4 574 aaPredicted RBP21.67■■□□□ 1.06
COX6A1-202ENST00000549525 FOXD1Q16676 465 aa20.18■□□□□ 0.82
COX6A1-202ENST00000549525 PLPPR3Q6T4P5 718 aa20.16■□□□□ 0.82
COX6A1-202ENST00000549525 PPP6R1Q9UPN7 881 aa19.4■□□□□ 0.7
COX6A1-202ENST00000549525 ADRA2BP18089 450 aa19.36■□□□□ 0.69
COX6A1-202ENST00000549525 PIAS4Q8N2W9 510 aaPredicted RBP18.98■□□□□ 0.63
COX6A1-202ENST00000549525 MSH5O43196 834 aa18.55■□□□□ 0.56
COX6A1-202ENST00000549525 POTEDQ86YR6 584 aa17.84■□□□□ 0.45
COX6A1-202ENST00000549525 PPP4R3CPQ6ZMV5 832 aa17.78■□□□□ 0.44
COX6A1-202ENST00000549525 MAPK8IP2Q13387 824 aaPredicted RBP17.6■□□□□ 0.41
COX6A1-202ENST00000549525 SCAF1Q9H7N4 1312 aaKnown RBP17.59■□□□□ 0.41
COX6A1-202ENST00000549525 KCNA4P22459 653 aa17.34■□□□□ 0.37
COX6A1-202ENST00000549525 DMRT2Q9Y5R5 561 aa17.32■□□□□ 0.36
COX6A1-202ENST00000549525 CNKSR2Q8WXI2 1034 aa17.28■□□□□ 0.36
COX6A1-202ENST00000549525 NCBP3Q53F19 620 aaKnown RBP17.23■□□□□ 0.35
COX6A1-202ENST00000549525 NPM3O75607 178 aaKnown RBP17.07■□□□□ 0.32
COX6A1-202ENST00000549525 RNF216Q9NWF9 866 aaPredicted RBP16.96■□□□□ 0.31
COX6A1-202ENST00000549525 HOXD11P31277 338 aaPredicted RBP16.93■□□□□ 0.3
COX6A1-202ENST00000549525 DNAJC5BQ9UF47 199 aa16.57■□□□□ 0.24
COX6A1-202ENST00000549525 DCAF8L1A6NGE4 600 aa16.52■□□□□ 0.24
COX6A1-202ENST00000549525 SLC4A1APQ9BWU0 796 aaKnown RBP16.45■□□□□ 0.22
COX6A1-202ENST00000549525 SLC4A2P04920 1241 aa16.17■□□□□ 0.18
COX6A1-202ENST00000549525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.09■□□□□ 0.178e-8■□□□□ 8.4
COX6A1-202ENST00000549525 ZBTB22O15209 634 aa16.01■□□□□ 0.15
COX6A1-202ENST00000549525 RNF39Q9H2S5 420 aa15.96■□□□□ 0.15
COX6A1-202ENST00000549525 EHMT2Q96KQ7 1210 aa15.93■□□□□ 0.14
COX6A1-202ENST00000549525 FOXD4L1Q9NU39 408 aa15.92■□□□□ 0.14
COX6A1-202ENST00000549525 U3KPZ7 1027 aaPredicted RBP15.9■□□□□ 0.14
COX6A1-202ENST00000549525 CSRNP3Q8WYN3 585 aa15.81■□□□□ 0.12
COX6A1-202ENST00000549525 MYCNP04198 464 aaPredicted RBP15.73■□□□□ 0.11
COX6A1-202ENST00000549525 C1QBPQ07021 282 aaKnown RBP15.7■□□□□ 0.1
COX6A1-202ENST00000549525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.55■□□□□ 0.08
COX6A1-202ENST00000549525 HNRNPUL2Q1KMD3 747 aaKnown RBP15.55■□□□□ 0.08
COX6A1-202ENST00000549525 CACNB1Q02641 598 aaPredicted RBP15.53■□□□□ 0.08
COX6A1-202ENST00000549525 SAMD1Q6SPF0 538 aaPredicted RBP15.53■□□□□ 0.08
COX6A1-202ENST00000549525 SPINK5Q9NQ38 1064 aaPredicted RBP15.48■□□□□ 0.07
COX6A1-202ENST00000549525 ATF5Q9Y2D1 282 aaPredicted RBP15.41■□□□□ 0.06
COX6A1-202ENST00000549525 APLP2Q06481 763 aa15.38■□□□□ 0.05
COX6A1-202ENST00000549525 ATXN8OSP0DMR3 200 aa15.36■□□□□ 0.05
COX6A1-202ENST00000549525 CAPN15O75808 1086 aa15.35■□□□□ 0.05
COX6A1-202ENST00000549525 TRHP20396 242 aaPredicted RBP15.27■□□□□ 0.04
COX6A1-202ENST00000549525 ZNF219Q9P2Y4 722 aaPredicted RBP15.24■□□□□ 0.03
COX6A1-202ENST00000549525 DSG3P32926 999 aa15.15■□□□□ 0.02
COX6A1-202ENST00000549525 ABCB7O75027 752 aa15.1■□□□□ 0.01
COX6A1-202ENST00000549525 NISCHQ9Y2I1 1504 aa15.05■□□□□ -0
COX6A1-202ENST00000549525 POLA2Q14181 598 aa15.02■□□□□ -0
COX6A1-202ENST00000549525 MKRN4PQ13434 485 aaPredicted RBP14.73□□□□□ -0.05
COX6A1-202ENST00000549525 ZBTB12Q9Y330 459 aaPredicted RBP14.71□□□□□ -0.05
COX6A1-202ENST00000549525 FBLN2P98095 1184 aa14.63□□□□□ -0.07
COX6A1-202ENST00000549525 OSCARQ8IYS5 282 aa14.54□□□□□ -0.08
COX6A1-202ENST00000549525 RBM42Q9BTD8 480 aaKnown RBP14.36□□□□□ -0.11
COX6A1-202ENST00000549525 SPDYE2BA6NHP3 402 aa14.34□□□□□ -0.11
COX6A1-202ENST00000549525 SPDYE6P0CI01 402 aa14.34□□□□□ -0.11
COX6A1-202ENST00000549525 SPDYE2Q495Y8 402 aa14.34□□□□□ -0.11
COX6A1-202ENST00000549525 SPDYE4A6NLX3 237 aa14.29□□□□□ -0.12
COX6A1-202ENST00000549525 ZNF692Q9BU19 519 aaPredicted RBP14.27□□□□□ -0.13
COX6A1-202ENST00000549525 SSUH2Q9Y2M2 353 aa14.27□□□□□ -0.13
COX6A1-202ENST00000549525 FKBP8Q14318 412 aa14.25□□□□□ -0.13
COX6A1-202ENST00000549525 AKT1S1Q96B36 256 aa14.2□□□□□ -0.14
COX6A1-202ENST00000549525 PABPN1Q86U42 306 aaKnown RBP eCLIP14.11□□□□□ -0.15
COX6A1-202ENST00000549525 REM2Q8IYK8 340 aaPredicted RBP14.1□□□□□ -0.15
COX6A1-202ENST00000549525 PROM2Q8N271 834 aa14.1□□□□□ -0.15
COX6A1-202ENST00000549525 PITPNM1O00562 1244 aa13.96□□□□□ -0.17
COX6A1-202ENST00000549525 POTEHQ6S545 545 aa13.93□□□□□ -0.18
COX6A1-202ENST00000549525 SPDYE1Q8NFV5 336 aaPredicted RBP13.92□□□□□ -0.18
COX6A1-202ENST00000549525 CLEC11AQ9Y240 323 aa13.87□□□□□ -0.19
COX6A1-202ENST00000549525 CHRDL2Q6WN34 429 aa13.85□□□□□ -0.19
COX6A1-202ENST00000549525 STAG3Q9UJ98 1225 aa13.79□□□□□ -0.2
COX6A1-202ENST00000549525 PRR29P0C7W0 189 aa13.72□□□□□ -0.21
COX6A1-202ENST00000549525 FXR2P51116 673 aaKnown RBP eCLIP13.7□□□□□ -0.22
COX6A1-202ENST00000549525 FBXO3Q9UK99 471 aa13.7□□□□□ -0.22
COX6A1-202ENST00000549525 PIP4P2Q8N4L2 257 aa13.69□□□□□ -0.22
COX6A1-202ENST00000549525 CREBZFQ9NS37 354 aa13.61□□□□□ -0.23
COX6A1-202ENST00000549525 VASPP50552 380 aaPredicted RBP13.59□□□□□ -0.23
COX6A1-202ENST00000549525 CHADLQ6NUI6 762 aa13.59□□□□□ -0.23
COX6A1-202ENST00000549525 PRKAR2AP13861 404 aaKnown RBP13.58□□□□□ -0.24
COX6A1-202ENST00000549525 MIER1Q8N108 512 aa13.53□□□□□ -0.24
COX6A1-202ENST00000549525 MNX1P50219 401 aaPredicted RBP13.49□□□□□ -0.25
COX6A1-202ENST00000549525 PLCD3Q8N3E9 789 aa13.49□□□□□ -0.25
COX6A1-202ENST00000549525 FARP1Q9Y4F1 1045 aaPredicted RBP13.44□□□□□ -0.26
COX6A1-202ENST00000549525 IFNLR1Q8IU57 520 aaPredicted RBP13.42□□□□□ -0.26
COX6A1-202ENST00000549525 PLEKHG5O94827 1062 aa13.39□□□□□ -0.27
COX6A1-202ENST00000549525 KLHL34Q8N239 644 aa13.31□□□□□ -0.28
COX6A1-202ENST00000549525 ZBTB47Q9UFB7 747 aaPredicted RBP13.31□□□□□ -0.28
COX6A1-202ENST00000549525 NPM1P06748 294 aaKnown RBP eCLIP13.29□□□□□ -0.28
COX6A1-202ENST00000549525 CCDC180Q9P1Z9 1646 aa13.28□□□□□ -0.28
COX6A1-202ENST00000549525 NUBP1P53384 320 aa13.25□□□□□ -0.29
COX6A1-202ENST00000549525 C19orf67A6NJJ6 358 aa13.24□□□□□ -0.29
COX6A1-202ENST00000549525 RASEFQ8IZ41 740 aa13.23□□□□□ -0.29
COX6A1-202ENST00000549525 SPOCK2Q92563 424 aa13.22□□□□□ -0.29
COX6A1-202ENST00000549525 HAX1O00165 279 aa13.2□□□□□ -0.3
COX6A1-202ENST00000549525 EVX2Q03828 476 aa13.19□□□□□ -0.3
COX6A1-202ENST00000549525 CD44P16070 742 aaKnown RBP13.18□□□□□ -0.3
COX6A1-202ENST00000549525 TSPYL2Q9H2G4 693 aaPredicted RBP13.12□□□□□ -0.31
COX6A1-202ENST00000549525 ZRANB1Q9UGI0 708 aa13.09□□□□□ -0.31
COX6A1-202ENST00000549525 FAM212AQ96EL1 285 aa13.08□□□□□ -0.32
COX6A1-202ENST00000549525 PAK3O75914 559 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms