RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 PIBF1Q8WXW3 757 aa16.77■□□□□ 0.28
CACNB3-209ENST00000548860 DNAJC25Q9H1X3 360 aa16.77■□□□□ 0.28
CACNB3-209ENST00000548860 NEXMIFQ5QGS0 1516 aa16.77■□□□□ 0.28
CACNB3-209ENST00000548860 A0A0D9SFI3 127 aa16.77■□□□□ 0.28
CACNB3-209ENST00000548860 SMC2O95347 1197 aa16.77■□□□□ 0.28
CACNB3-209ENST00000548860 DBNDD2Q9BQY9 259 aa16.77■□□□□ 0.28
CACNB3-209ENST00000548860 RXRAP19793 462 aa16.77■□□□□ 0.27
CACNB3-209ENST00000548860 RALYLQ86SE5 291 aaKnown RBP16.77■□□□□ 0.27
CACNB3-209ENST00000548860 USP16Q9Y5T5 823 aa16.77■□□□□ 0.27
CACNB3-209ENST00000548860 PTPRMP28827 1452 aa16.77■□□□□ 0.27
CACNB3-209ENST00000548860 PPLO60437 1756 aa16.77■□□□□ 0.27
CACNB3-209ENST00000548860 KINO60870 393 aaKnown RBP16.76■□□□□ 0.27
CACNB3-209ENST00000548860 HSPA4P34932 840 aa16.76■□□□□ 0.27
CACNB3-209ENST00000548860 TTC21AQ8NDW8 1320 aa16.76■□□□□ 0.27
CACNB3-209ENST00000548860 PTCH1Q13635 1447 aa16.76■□□□□ 0.27
CACNB3-209ENST00000548860 CPS1P31327 1500 aa16.76■□□□□ 0.27
CACNB3-209ENST00000548860 TMEM2Q9UHN6 1383 aa16.76■□□□□ 0.27
CACNB3-209ENST00000548860 PDCP20941 246 aa16.76■□□□□ 0.27
CACNB3-209ENST00000548860 Q6ZUG5 572 aa16.76■□□□□ 0.27
CACNB3-209ENST00000548860 TMX1Q9H3N1 280 aa16.76■□□□□ 0.27
CACNB3-209ENST00000548860 PRDM11Q9NQV5 511 aa16.76■□□□□ 0.27
CACNB3-209ENST00000548860 RNMTO43148 476 aaKnown RBP16.76■□□□□ 0.27
CACNB3-209ENST00000548860 ANO6Q4KMQ2 910 aa16.76■□□□□ 0.27
CACNB3-209ENST00000548860 IDH1O75874 414 aaKnown RBP16.75■□□□□ 0.27
CACNB3-209ENST00000548860 NCBP3Q53F19 620 aaKnown RBP16.75■□□□□ 0.27
CACNB3-209ENST00000548860 CCDC186Q7Z3E2 898 aa16.75■□□□□ 0.27
CACNB3-209ENST00000548860 SSH3Q8TE77 659 aa16.75■□□□□ 0.27
CACNB3-209ENST00000548860 MYO5BQ9ULV0 1848 aa16.75■□□□□ 0.27
CACNB3-209ENST00000548860 SBNO1A3KN83 1393 aa16.75■□□□□ 0.27
CACNB3-209ENST00000548860 OFD1O75665 1012 aa16.75■□□□□ 0.27
CACNB3-209ENST00000548860 PTGS1P23219 599 aa16.75■□□□□ 0.27
CACNB3-209ENST00000548860 APOBRQ0VD83 1088 aa16.75■□□□□ 0.27
CACNB3-209ENST00000548860 STK38Q15208 465 aa16.74■□□□□ 0.27
CACNB3-209ENST00000548860 BEND3Q5T5X7 828 aa16.74■□□□□ 0.27
CACNB3-209ENST00000548860 KIAA1210Q9ULL0 1709 aa16.74■□□□□ 0.27
CACNB3-209ENST00000548860 LIG1P18858 919 aa16.74■□□□□ 0.27
CACNB3-209ENST00000548860 HOMER1Q86YM7 354 aa16.74■□□□□ 0.27
CACNB3-209ENST00000548860 KCNH5Q8NCM2 988 aa16.74■□□□□ 0.27
CACNB3-209ENST00000548860 ZHX1Q9UKY1 873 aaPredicted RBP16.74■□□□□ 0.27
CACNB3-209ENST00000548860 TPCN1Q9ULQ1 816 aa16.74■□□□□ 0.27
CACNB3-209ENST00000548860 LMTK2Q8IWU2 1503 aa16.74■□□□□ 0.27
CACNB3-209ENST00000548860 DIP2CQ9Y2E4 1556 aa16.74■□□□□ 0.27
CACNB3-209ENST00000548860 SHPRHQ149N8 1683 aa16.74■□□□□ 0.27
CACNB3-209ENST00000548860 ANAPC15P60006 121 aa16.74■□□□□ 0.27
CACNB3-209ENST00000548860 NOLC1Q14978 699 aaKnown RBP eCLIP16.74■□□□□ 0.27
CACNB3-209ENST00000548860 SYNE3Q6ZMZ3 975 aa16.74■□□□□ 0.27
CACNB3-209ENST00000548860 ZNF496Q96IT1 587 aaPredicted RBP16.74■□□□□ 0.27
CACNB3-209ENST00000548860 RAD50Q92878 1312 aa16.74■□□□□ 0.27
CACNB3-209ENST00000548860 IBTKQ9P2D0 1353 aaPredicted RBP16.74■□□□□ 0.27
CACNB3-209ENST00000548860 NEK1Q96PY6 1258 aa16.74■□□□□ 0.27
CACNB3-209ENST00000548860 PIK3C2BO00750 1634 aa16.73■□□□□ 0.27
CACNB3-209ENST00000548860 IFIT1P09914 478 aaKnown RBP16.73■□□□□ 0.27
CACNB3-209ENST00000548860 ZNF165P49910 485 aa16.73■□□□□ 0.27
CACNB3-209ENST00000548860 AKAP4Q5JQC9 854 aa16.73■□□□□ 0.27
CACNB3-209ENST00000548860 IP6K1Q92551 441 aa16.73■□□□□ 0.27
CACNB3-209ENST00000548860 ZSCAN31Q96LW9 406 aaPredicted RBP16.73■□□□□ 0.27
CACNB3-209ENST00000548860 HYPKQ9NX55 129 aa16.73■□□□□ 0.27
CACNB3-209ENST00000548860 CCDC171Q6TFL3 1326 aa16.73■□□□□ 0.27
CACNB3-209ENST00000548860 ALKQ9UM73 1620 aa16.73■□□□□ 0.27
CACNB3-209ENST00000548860 TTC39AQ5SRH9 613 aa16.73■□□□□ 0.27
CACNB3-209ENST00000548860 FTOQ9C0B1 505 aaKnown RBP eCLIP16.73■□□□□ 0.27
CACNB3-209ENST00000548860 PPP6R1Q9UPN7 881 aa16.73■□□□□ 0.27
CACNB3-209ENST00000548860 KIAA0232Q92628 1395 aa16.72■□□□□ 0.27
CACNB3-209ENST00000548860 PES1O00541 588 aaKnown RBP16.72■□□□□ 0.27
CACNB3-209ENST00000548860 LINS1Q8NG48 757 aa16.72■□□□□ 0.27
CACNB3-209ENST00000548860 CEP126Q9P2H0 1117 aa16.72■□□□□ 0.27
CACNB3-209ENST00000548860 NOL7Q9UMY1 257 aaKnown RBP16.72■□□□□ 0.27
CACNB3-209ENST00000548860 TAF6LQ9Y6J9 622 aa16.72■□□□□ 0.27
CACNB3-209ENST00000548860 SLC27A2O14975 620 aa16.72■□□□□ 0.27
CACNB3-209ENST00000548860 TRDNQ13061 729 aa16.72■□□□□ 0.27
CACNB3-209ENST00000548860 CCDC57Q2TAC2 916 aa16.72■□□□□ 0.27
CACNB3-209ENST00000548860 TTLL5Q6EMB2 1281 aa16.72■□□□□ 0.27
CACNB3-209ENST00000548860 ZNF589Q86UQ0 364 aaPredicted RBP16.72■□□□□ 0.27
CACNB3-209ENST00000548860 CNNM1Q9NRU3 951 aa16.72■□□□□ 0.27
CACNB3-209ENST00000548860 IQSEC3Q9UPP2 1182 aaPredicted RBP16.72■□□□□ 0.27
CACNB3-209ENST00000548860 CD163L1Q9NR16 1453 aa16.71■□□□□ 0.27
CACNB3-209ENST00000548860 A1BGP04217 495 aa16.71■□□□□ 0.27
CACNB3-209ENST00000548860 SLC4A8Q2Y0W8 1093 aa16.71■□□□□ 0.27
CACNB3-209ENST00000548860 HELBQ8NG08 1087 aaPredicted RBP16.71■□□□□ 0.27
CACNB3-209ENST00000548860 SETBP1Q9Y6X0 1596 aa16.71■□□□□ 0.27
CACNB3-209ENST00000548860 ARHGEF40Q8TER5 1519 aa16.71■□□□□ 0.27
CACNB3-209ENST00000548860 PDILTQ8N807 584 aa16.71■□□□□ 0.26
CACNB3-209ENST00000548860 LSG1Q9H089 658 aaKnown RBP16.71■□□□□ 0.26
CACNB3-209ENST00000548860 A2ML1A8K2U0 1454 aa16.71■□□□□ 0.26
CACNB3-209ENST00000548860 HIP1O00291 1037 aa16.7■□□□□ 0.26
CACNB3-209ENST00000548860 DDIT3P35638 169 aa16.7■□□□□ 0.26
CACNB3-209ENST00000548860 LRMPQ12912 555 aa16.7■□□□□ 0.26
CACNB3-209ENST00000548860 AMOTQ4VCS5 1084 aa16.7■□□□□ 0.26
CACNB3-209ENST00000548860 GIGYF1O75420 1035 aaPredicted RBP16.7■□□□□ 0.26
CACNB3-209ENST00000548860 GTF2E1P29083 439 aaPredicted RBP16.7■□□□□ 0.26
CACNB3-209ENST00000548860 PI4K2BQ8TCG2 481 aa16.7■□□□□ 0.26
CACNB3-209ENST00000548860 KIF3AQ9Y496 699 aa16.7■□□□□ 0.26
CACNB3-209ENST00000548860 AATKQ6ZMQ8 1374 aa16.7■□□□□ 0.26
CACNB3-209ENST00000548860 IGSF1Q8N6C5 1336 aa16.7■□□□□ 0.26
CACNB3-209ENST00000548860 NEO1Q92859 1461 aa16.7■□□□□ 0.26
CACNB3-209ENST00000548860 INTS4Q96HW7 963 aaKnown RBP16.7■□□□□ 0.26
CACNB3-209ENST00000548860 USP6P35125 1406 aa16.7■□□□□ 0.26
CACNB3-209ENST00000548860 IFT172Q9UG01 1749 aa16.7■□□□□ 0.26
CACNB3-209ENST00000548860 PPP1R9BQ96SB3 815 aa16.69■□□□□ 0.26
CACNB3-209ENST00000548860 SH2B1Q9NRF2 756 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms