RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 NEUROD2Q15784 382 aa24.52■■□□□ 1.52
CHERP-204ENST00000546538 CHL1O00533 1208 aa24.51■■□□□ 1.51
CHERP-204ENST00000546538 NECTIN2Q92692 538 aa24.51■■□□□ 1.51
CHERP-204ENST00000546538 L3MBTL3Q96JM7 780 aaPredicted RBP24.51■■□□□ 1.51
CHERP-204ENST00000546538 ADAMTS8Q9UP79 889 aa24.51■■□□□ 1.51
CHERP-204ENST00000546538 RTKN2Q8IZC4 609 aa24.5■■□□□ 1.51
CHERP-204ENST00000546538 SYNE4Q8N205 404 aa24.5■■□□□ 1.51
CHERP-204ENST00000546538 ANKRD36CQ5JPF3 1778 aa24.49■■□□□ 1.51
CHERP-204ENST00000546538 LMOD3Q0VAK6 560 aa24.49■■□□□ 1.51
CHERP-204ENST00000546538 SCN4AP35499 1836 aa24.48■■□□□ 1.51
CHERP-204ENST00000546538 IARSP41252 1262 aaKnown RBP24.48■■□□□ 1.51
CHERP-204ENST00000546538 RUNDC1Q96C34 613 aa24.48■■□□□ 1.51
CHERP-204ENST00000546538 FZD9O00144 591 aa24.46■■□□□ 1.51
CHERP-204ENST00000546538 COPS6Q7L5N1 327 aa24.46■■□□□ 1.51
CHERP-204ENST00000546538 XAGE3Q8WTP9 111 aa24.46■■□□□ 1.51
CHERP-204ENST00000546538 PSMD1Q99460 953 aa24.46■■□□□ 1.51
CHERP-204ENST00000546538 TAF1DQ9H5J8 278 aaPredicted RBP24.46■■□□□ 1.51
CHERP-204ENST00000546538 LAMB2P55268 1798 aa24.46■■□□□ 1.51
CHERP-204ENST00000546538 ADAMTSL1Q8N6G6 1762 aa24.46■■□□□ 1.51
CHERP-204ENST00000546538 CHADLQ6NUI6 762 aa24.45■■□□□ 1.51
CHERP-204ENST00000546538 RPGRQ92834 1020 aaKnown RBP24.45■■□□□ 1.51
CHERP-204ENST00000546538 PRKRIP1Q9H875 184 aaPredicted RBP24.45■■□□□ 1.51
CHERP-204ENST00000546538 PARP10Q53GL7 1025 aa24.44■■□□□ 1.5
CHERP-204ENST00000546538 SLC10A5Q5PT55 438 aa24.44■■□□□ 1.5
CHERP-204ENST00000546538 CRAMP1Q96RY5 1269 aa24.44■■□□□ 1.5
CHERP-204ENST00000546538 AIMP1Q12904 312 aaKnown RBP24.44■■□□□ 1.5
CHERP-204ENST00000546538 LTBP1Q14766 1721 aa24.43■■□□□ 1.5
CHERP-204ENST00000546538 WDR43Q15061 677 aaKnown RBP eCLIP24.43■■□□□ 1.5
CHERP-204ENST00000546538 PPP1R42Q7Z4L9 355 aa24.43■■□□□ 1.5
CHERP-204ENST00000546538 NLRP10Q86W26 655 aa24.43■■□□□ 1.5
CHERP-204ENST00000546538 UTP14AQ9BVJ6 771 aaKnown RBP24.43■■□□□ 1.5
CHERP-204ENST00000546538 DDX21Q9NR30 783 aaKnown RBP eCLIP24.43■■□□□ 1.5
CHERP-204ENST00000546538 CHPF2Q9P2E5 772 aa24.43■■□□□ 1.5
CHERP-204ENST00000546538 TCERG1O14776 1098 aaKnown RBP24.42■■□□□ 1.5
CHERP-204ENST00000546538 PPEF1O14829 653 aaPredicted RBP24.42■■□□□ 1.5
CHERP-204ENST00000546538 RBM17Q96I25 401 aaKnown RBP24.42■■□□□ 1.5
CHERP-204ENST00000546538 LAS1LQ9Y4W2 734 aaKnown RBP24.42■■□□□ 1.5
CHERP-204ENST00000546538 RNF123Q5XPI4 1314 aa24.41■■□□□ 1.5
CHERP-204ENST00000546538 PASKQ96RG2 1323 aa24.41■■□□□ 1.5
CHERP-204ENST00000546538 IQCA1LA6NCM1 817 aa24.41■■□□□ 1.5
CHERP-204ENST00000546538 CC2D2BQ6DHV5 1058 aa24.41■■□□□ 1.5
CHERP-204ENST00000546538 ZNF428Q96B54 188 aa24.41■■□□□ 1.5
CHERP-204ENST00000546538 ABCC4O15439 1325 aa24.4■■□□□ 1.5
CHERP-204ENST00000546538 LDHDQ86WU2 507 aa24.4■■□□□ 1.5
CHERP-204ENST00000546538 HCLS1P14317 486 aaPredicted RBP24.39■■□□□ 1.5
CHERP-204ENST00000546538 TCIRG1Q13488 830 aa24.39■■□□□ 1.5
CHERP-204ENST00000546538 NLRP3Q96P20 1036 aa24.39■■□□□ 1.5
CHERP-204ENST00000546538 TAF1P21675 1872 aa24.39■■□□□ 1.49
CHERP-204ENST00000546538 ITGBL1O95965 494 aaPredicted RBP24.38■■□□□ 1.49
CHERP-204ENST00000546538 HACL1Q9UJ83 578 aa24.38■■□□□ 1.49
CHERP-204ENST00000546538 EPHX2P34913 555 aa24.37■■□□□ 1.49
CHERP-204ENST00000546538 GPC2Q8N158 579 aa24.37■■□□□ 1.49
CHERP-204ENST00000546538 CFAP44Q96MT7 982 aa24.37■■□□□ 1.49
CHERP-204ENST00000546538 MBIPQ9NS73 344 aa24.37■■□□□ 1.49
CHERP-204ENST00000546538 DDX60Q8IY21 1712 aaKnown RBP24.37■■□□□ 1.49
CHERP-204ENST00000546538 COL4A1P02462 1669 aa24.37■■□□□ 1.49
CHERP-204ENST00000546538 ZNF853P0CG23 659 aa24.36■■□□□ 1.49
CHERP-204ENST00000546538 COL13A1Q5TAT6 717 aaPredicted RBP24.36■■□□□ 1.49
CHERP-204ENST00000546538 HDGFL1Q5TGJ6 251 aa24.36■■□□□ 1.49
CHERP-204ENST00000546538 CREBZFQ9NS37 354 aa24.36■■□□□ 1.49
CHERP-204ENST00000546538 ATP6V0A2Q9Y487 856 aa24.36■■□□□ 1.49
CHERP-204ENST00000546538 EAPPQ56P03 285 aaPredicted RBP24.35■■□□□ 1.49
CHERP-204ENST00000546538 HSP90AB3PQ58FF7 597 aa24.35■■□□□ 1.49
CHERP-204ENST00000546538 HOXB7P09629 217 aa24.35■■□□□ 1.49
CHERP-204ENST00000546538 JDP2Q8WYK2 163 aa24.35■■□□□ 1.49
CHERP-204ENST00000546538 APAF1O14727 1248 aa24.34■■□□□ 1.49
CHERP-204ENST00000546538 SCNN1DP51172 638 aa24.34■■□□□ 1.49
CHERP-204ENST00000546538 DUSP27Q5VZP5 1158 aa24.34■■□□□ 1.49
CHERP-204ENST00000546538 LARGE2Q8N3Y3 721 aa24.34■■□□□ 1.49
CHERP-204ENST00000546538 ISCA1Q9BUE6 129 aa24.34■■□□□ 1.49
CHERP-204ENST00000546538 TRMT112Q9UI30 125 aaKnown RBP24.34■■□□□ 1.49
CHERP-204ENST00000546538 DUOX1Q9NRD9 1551 aa24.33■■□□□ 1.49
CHERP-204ENST00000546538 GRIPAP1Q4V328 841 aa24.33■■□□□ 1.49
CHERP-204ENST00000546538 PLBD2Q8NHP8 589 aa24.33■■□□□ 1.49
CHERP-204ENST00000546538 MKRN1Q9UHC7 482 aaKnown RBP24.33■■□□□ 1.49
CHERP-204ENST00000546538 GJA3Q9Y6H8 435 aa24.33■■□□□ 1.49
CHERP-204ENST00000546538 SH3TC1Q8TE82 1336 aa24.32■■□□□ 1.48
CHERP-204ENST00000546538 AOC3Q16853 763 aa24.32■■□□□ 1.48
CHERP-204ENST00000546538 CCDC184Q52MB2 194 aa24.32■■□□□ 1.48
CHERP-204ENST00000546538 RTFDC1Q9BY42 306 aaPredicted RBP24.32■■□□□ 1.48
CHERP-204ENST00000546538 MAP1SQ66K74 1059 aaPredicted RBP24.31■■□□□ 1.48
CHERP-204ENST00000546538 ANKRD13DQ6ZTN6 518 aa24.31■■□□□ 1.48
CHERP-204ENST00000546538 DBF4Q9UBU7 674 aaPredicted RBP24.31■■□□□ 1.48
CHERP-204ENST00000546538 LRRC37AA6NMS7 1700 aa24.3■■□□□ 1.48
CHERP-204ENST00000546538 ATP5J2-PTCD1G3V325 749 aa24.3■■□□□ 1.48
CHERP-204ENST00000546538 HSPA1AP0DMV8 641 aaKnown RBP24.3■■□□□ 1.48
CHERP-204ENST00000546538 HSPA1BP0DMV9 641 aaKnown RBP24.3■■□□□ 1.48
CHERP-204ENST00000546538 EPS15P42566 896 aa24.3■■□□□ 1.48
CHERP-204ENST00000546538 EIF6P56537 245 aaKnown RBP24.3■■□□□ 1.48
CHERP-204ENST00000546538 PPIP5K2O43314 1243 aa24.29■■□□□ 1.48
CHERP-204ENST00000546538 SP8Q8IXZ3 490 aa24.29■■□□□ 1.48
CHERP-204ENST00000546538 CNTNAP1P78357 1384 aa24.28■■□□□ 1.48
CHERP-204ENST00000546538 BBOX1O75936 387 aa24.28■■□□□ 1.48
CHERP-204ENST00000546538 PNMA8AQ86V59 439 aaPredicted RBP24.28■■□□□ 1.48
CHERP-204ENST00000546538 FAM89AQ96GI7 184 aa24.28■■□□□ 1.48
CHERP-204ENST00000546538 CLEC11AQ9Y240 323 aa24.28■■□□□ 1.48
CHERP-204ENST00000546538 GRAPQ13588 217 aa24.27■■□□□ 1.48
CHERP-204ENST00000546538 CNTROBQ8N137 903 aa24.27■■□□□ 1.48
CHERP-204ENST00000546538 GRAPLQ8TC17 118 aaPredicted RBP24.27■■□□□ 1.48
CHERP-204ENST00000546538 IFT57Q9NWB7 429 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms