RNA–Protein interactions for RNA: ENST00000546312.5

SLC3A2-223, Transcript of solute carrier family 3 member 2, human

TSL 2

Gene SLC3A2, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC3A2-223	ENST00000546312	CCT4	P50991	539 aa	Known RBP	11.44	□□□□□ -0.58
SLC3A2-223	ENST00000546312	ZNF827	Q17R98	1081 aa		11.44	□□□□□ -0.58
SLC3A2-223	ENST00000546312	BMP2KL	Q5H9B9	411 aa		11.44	□□□□□ -0.58
SLC3A2-223	ENST00000546312	TBC1D32	Q96NH3	1257 aa		11.44	□□□□□ -0.58
SLC3A2-223	ENST00000546312	PHF12	Q96QT6	1004 aa		11.44	□□□□□ -0.58
SLC3A2-223	ENST00000546312	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.44	□□□□□ -0.58
SLC3A2-223	ENST00000546312	USP16	Q9Y5T5	823 aa		11.44	□□□□□ -0.58
SLC3A2-223	ENST00000546312	TUBGCP6	Q96RT7	1819 aa		11.44	□□□□□ -0.58
SLC3A2-223	ENST00000546312	CACNA1F	O60840	1977 aa		11.43	□□□□□ -0.58
SLC3A2-223	ENST00000546312		A0A087WZG4	1122 aa		11.43	□□□□□ -0.58
SLC3A2-223	ENST00000546312	HOXB7	P09629	217 aa		11.43	□□□□□ -0.58
SLC3A2-223	ENST00000546312	INTS5	Q6P9B9	1019 aa	Known RBP	11.43	□□□□□ -0.58
SLC3A2-223	ENST00000546312	KIF12	Q96FN5	646 aa		11.43	□□□□□ -0.58
SLC3A2-223	ENST00000546312	SGIP1	Q9BQI5	828 aa		11.43	□□□□□ -0.58
SLC3A2-223	ENST00000546312	STK31	Q9BXU1	1019 aa		11.43	□□□□□ -0.58
SLC3A2-223	ENST00000546312	HDAC5	Q9UQL6	1122 aa		11.43	□□□□□ -0.58
SLC3A2-223	ENST00000546312	LAMB4	A4D0S4	1761 aa		11.42	□□□□□ -0.58
SLC3A2-223	ENST00000546312	RFC4	P35249	363 aa		11.42	□□□□□ -0.58
SLC3A2-223	ENST00000546312	NBR1	Q14596	966 aa		11.42	□□□□□ -0.58
SLC3A2-223	ENST00000546312	CASC1	Q6TDU7	716 aa		11.42	□□□□□ -0.58
SLC3A2-223	ENST00000546312	COL23A1	Q86Y22	540 aa	Predicted RBP	11.42	□□□□□ -0.58
SLC3A2-223	ENST00000546312	IFNL1	Q8IU54	200 aa		11.42	□□□□□ -0.58
SLC3A2-223	ENST00000546312	ERBB4	Q15303	1308 aa		11.41	□□□□□ -0.58
SLC3A2-223	ENST00000546312	PNPLA7	Q6ZV29	1317 aa		11.41	□□□□□ -0.58
SLC3A2-223	ENST00000546312	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.41	□□□□□ -0.58
SLC3A2-223	ENST00000546312	A1BG	P04217	495 aa		11.41	□□□□□ -0.58
SLC3A2-223	ENST00000546312	IL6ST	P40189	918 aa	Predicted RBP	11.41	□□□□□ -0.58
SLC3A2-223	ENST00000546312	PSEN1	P49768	467 aa		11.41	□□□□□ -0.58
SLC3A2-223	ENST00000546312	CCDC30	Q5VVM6	783 aa		11.41	□□□□□ -0.58
SLC3A2-223	ENST00000546312	ARHGEF1	Q92888	912 aa	Known RBP	11.41	□□□□□ -0.58
SLC3A2-223	ENST00000546312	ZPR1	O75312	459 aa		11.4	□□□□□ -0.58
SLC3A2-223	ENST00000546312	PHF14	O94880	888 aa		11.4	□□□□□ -0.58
SLC3A2-223	ENST00000546312	EIF2S2	P20042	333 aa	Known RBP	11.4	□□□□□ -0.58
SLC3A2-223	ENST00000546312	PTMS	P20962	102 aa		11.4	□□□□□ -0.58
SLC3A2-223	ENST00000546312	EIF5	P55010	431 aa	Known RBP	11.4	□□□□□ -0.58
SLC3A2-223	ENST00000546312	C8orf58	Q8NAV2	365 aa		11.4	□□□□□ -0.58
SLC3A2-223	ENST00000546312	C22orf23	Q9BZE7	217 aa		11.4	□□□□□ -0.58
SLC3A2-223	ENST00000546312	SPON1	Q9HCB6	807 aa		11.4	□□□□□ -0.58
SLC3A2-223	ENST00000546312	CASZ1	Q86V15	1759 aa		11.39	□□□□□ -0.59
SLC3A2-223	ENST00000546312	PRAMEF22	A3QJZ6	481 aa		11.39	□□□□□ -0.59
SLC3A2-223	ENST00000546312	C19orf67	A6NJJ6	358 aa		11.39	□□□□□ -0.59
SLC3A2-223	ENST00000546312	GNAI3	P08754	354 aa		11.39	□□□□□ -0.59
SLC3A2-223	ENST00000546312	DEK	P35659	375 aa	Known RBP	11.39	□□□□□ -0.59
SLC3A2-223	ENST00000546312	ANKRD45	Q5TZF3	282 aa		11.39	□□□□□ -0.59
SLC3A2-223	ENST00000546312	NLGN1	Q8N2Q7	840 aa		11.39	□□□□□ -0.59
SLC3A2-223	ENST00000546312	MTFR1L	Q9H019	292 aa		11.39	□□□□□ -0.59
SLC3A2-223	ENST00000546312	DCTPP1	Q9H773	170 aa		11.39	□□□□□ -0.59
SLC3A2-223	ENST00000546312	ZBTB1	Q9Y2K1	713 aa		11.39	□□□□□ -0.59
SLC3A2-223	ENST00000546312	HAX1	O00165	279 aa		11.38	□□□□□ -0.59
SLC3A2-223	ENST00000546312	RBM25	P49756	843 aa	Known RBP	11.38	□□□□□ -0.59
SLC3A2-223	ENST00000546312	TSPYL6	Q8N831	410 aa		11.38	□□□□□ -0.59
SLC3A2-223	ENST00000546312	ANKRD44	Q8N8A2	993 aa		11.38	□□□□□ -0.59
SLC3A2-223	ENST00000546312	DBF4	Q9UBU7	674 aa	Predicted RBP	11.38	□□□□□ -0.59
SLC3A2-223	ENST00000546312	NARF	Q9UHQ1	456 aa		11.38	□□□□□ -0.59
SLC3A2-223	ENST00000546312	TNN	Q9UQP3	1299 aa		11.38	□□□□□ -0.59
SLC3A2-223	ENST00000546312	ELL2	O00472	640 aa	Predicted RBP	11.37	□□□□□ -0.59
SLC3A2-223	ENST00000546312	HDGFL1	Q5TGJ6	251 aa		11.37	□□□□□ -0.59
SLC3A2-223	ENST00000546312	HSCB	Q8IWL3	235 aa		11.37	□□□□□ -0.59
SLC3A2-223	ENST00000546312	SNX21	Q969T3	373 aa		11.37	□□□□□ -0.59
SLC3A2-223	ENST00000546312	ARX	Q96QS3	562 aa		11.37	□□□□□ -0.59
SLC3A2-223	ENST00000546312	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.37	□□□□□ -0.59
SLC3A2-223	ENST00000546312	HYPK	Q9NX55	129 aa		11.37	□□□□□ -0.59
SLC3A2-223	ENST00000546312	COL24A1	Q17RW2	1714 aa		11.36	□□□□□ -0.59
SLC3A2-223	ENST00000546312	NBPF26	B4DH59	902 aa		11.36	□□□□□ -0.59
SLC3A2-223	ENST00000546312	ZBTB7A	O95365	584 aa		11.36	□□□□□ -0.59
SLC3A2-223	ENST00000546312	MYL6B	P14649	208 aa		11.36	□□□□□ -0.59
SLC3A2-223	ENST00000546312	POLD1	P28340	1107 aa		11.36	□□□□□ -0.59
SLC3A2-223	ENST00000546312	NFKBIB	Q15653	356 aa		11.36	□□□□□ -0.59
SLC3A2-223	ENST00000546312	KRT24	Q2M2I5	525 aa		11.36	□□□□□ -0.59
SLC3A2-223	ENST00000546312	NBPF10	Q6P3W6	841 aa	Known RBP	11.36	□□□□□ -0.59
SLC3A2-223	ENST00000546312	DZIP3	Q86Y13	1208 aa	Known RBP	11.36	□□□□□ -0.59
SLC3A2-223	ENST00000546312	NBPF15	Q8N660	670 aa		11.36	□□□□□ -0.59
SLC3A2-223	ENST00000546312	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.36	□□□□□ -0.59
SLC3A2-223	ENST00000546312	RYDEN	Q9NUL5	291 aa	Known RBP	11.36	□□□□□ -0.59
SLC3A2-223	ENST00000546312	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.36	□□□□□ -0.59
SLC3A2-223	ENST00000546312	COL15A1	P39059	1388 aa		11.36	□□□□□ -0.59
SLC3A2-223	ENST00000546312	C4A	P0C0L4	1744 aa		11.35	□□□□□ -0.59
SLC3A2-223	ENST00000546312	CDC45	O75419	566 aa		11.35	□□□□□ -0.59
SLC3A2-223	ENST00000546312	CLEC4G	Q6UXB4	293 aa		11.35	□□□□□ -0.59
SLC3A2-223	ENST00000546312	SMIM5	Q71RC9	77 aa		11.35	□□□□□ -0.59
SLC3A2-223	ENST00000546312	AMIGO3	Q86WK7	504 aa		11.35	□□□□□ -0.59
SLC3A2-223	ENST00000546312	SKAP1	Q86WV1	359 aa		11.35	□□□□□ -0.59
SLC3A2-223	ENST00000546312	TBC1D2B	Q9UPU7	963 aa		11.35	□□□□□ -0.59
SLC3A2-223	ENST00000546312	NUP98	P52948	1817 aa		11.35	□□□□□ -0.59
SLC3A2-223	ENST00000546312	USP42	Q9H9J4	1324 aa	Known RBP	11.35	□□□□□ -0.59
SLC3A2-223	ENST00000546312	ERVV-1	B6SEH8	477 aa		11.34	□□□□□ -0.59
SLC3A2-223	ENST00000546312	GNAI2	P04899	355 aa		11.34	□□□□□ -0.59
SLC3A2-223	ENST00000546312	GYS1	P13807	737 aa		11.34	□□□□□ -0.59
SLC3A2-223	ENST00000546312	PDIA6	Q15084	440 aa		11.34	□□□□□ -0.59
SLC3A2-223	ENST00000546312	USPL1	Q5W0Q7	1092 aa		11.34	□□□□□ -0.59
SLC3A2-223	ENST00000546312	KIF6	Q6ZMV9	814 aa		11.34	□□□□□ -0.59
SLC3A2-223	ENST00000546312	NECTIN2	Q92692	538 aa		11.34	□□□□□ -0.59
SLC3A2-223	ENST00000546312	LNPK	Q9C0E8	428 aa		11.34	□□□□□ -0.59
SLC3A2-223	ENST00000546312	SRCIN1	Q9C0H9	1055 aa		11.34	□□□□□ -0.59
SLC3A2-223	ENST00000546312	ZNF652	Q9Y2D9	606 aa		11.34	□□□□□ -0.59
SLC3A2-223	ENST00000546312	EPB41L2	O43491	1005 aa	Known RBP	11.33	□□□□□ -0.6
SLC3A2-223	ENST00000546312	PIP4K2A	P48426	406 aa	Predicted RBP	11.33	□□□□□ -0.6
SLC3A2-223	ENST00000546312	CHMP5	Q9NZZ3	219 aa		11.33	□□□□□ -0.6
SLC3A2-223	ENST00000546312	CHPF2	Q9P2E5	772 aa		11.33	□□□□□ -0.6
SLC3A2-223	ENST00000546312	PARP3	Q9Y6F1	533 aa		11.33	□□□□□ -0.6

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