RNA–Protein interactions for RNA: ENST00000546181.2

NECAP1-209, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 1,036 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-209ENST00000546181 FXR2P51116 673 aaKnown RBP eCLIP15.24■□□□□ 0.03
NECAP1-209ENST00000546181 ANXA1P04083 346 aa15.23■□□□□ 0.03
NECAP1-209ENST00000546181 FKBP4Q02790 459 aaKnown RBP eCLIP15.23■□□□□ 0.03
NECAP1-209ENST00000546181 SOGA3Q5TF21 947 aa15.23■□□□□ 0.03
NECAP1-209ENST00000546181 PNISRQ8TF01 805 aaKnown RBP15.23■□□□□ 0.03
NECAP1-209ENST00000546181 COL4A5P29400 1685 aa15.22■□□□□ 0.03
NECAP1-209ENST00000546181 PROSER3Q2NL68 480 aa15.22■□□□□ 0.03
NECAP1-209ENST00000546181 COL13A1Q5TAT6 717 aaPredicted RBP15.22■□□□□ 0.03
NECAP1-209ENST00000546181 KIF6Q6ZMV9 814 aa15.22■□□□□ 0.03
NECAP1-209ENST00000546181 C3orf67Q6ZVT6 689 aa15.22■□□□□ 0.03
NECAP1-209ENST00000546181 SNED1Q8TER0 1413 aa15.22■□□□□ 0.03
NECAP1-209ENST00000546181 RGL2O15211 777 aa15.21■□□□□ 0.03
NECAP1-209ENST00000546181 SUSD4Q5VX71 490 aa15.21■□□□□ 0.03
NECAP1-209ENST00000546181 CHADLQ6NUI6 762 aa15.21■□□□□ 0.03
NECAP1-209ENST00000546181 TSPYL4Q9UJ04 414 aa15.21■□□□□ 0.03
NECAP1-209ENST00000546181 SCN4AP35499 1836 aa15.2■□□□□ 0.02
NECAP1-209ENST00000546181 ERVV-1B6SEH8 477 aa15.2■□□□□ 0.02
NECAP1-209ENST00000546181 TCERG1O14776 1098 aaKnown RBP15.2■□□□□ 0.02
NECAP1-209ENST00000546181 EIF2S2P20042 333 aaKnown RBP15.2■□□□□ 0.02
NECAP1-209ENST00000546181 RIPK4P57078 832 aa15.2■□□□□ 0.02
NECAP1-209ENST00000546181 CRY2Q49AN0 593 aa15.2■□□□□ 0.02
NECAP1-209ENST00000546181 CCDC146Q8IYE0 955 aa15.2■□□□□ 0.02
NECAP1-209ENST00000546181 SYNE4Q8N205 404 aa15.2■□□□□ 0.02
NECAP1-209ENST00000546181 NECTIN2Q92692 538 aa15.2■□□□□ 0.02
NECAP1-209ENST00000546181 IARSP41252 1262 aaKnown RBP15.19■□□□□ 0.02
NECAP1-209ENST00000546181 PDIA6Q15084 440 aa15.19■□□□□ 0.02
NECAP1-209ENST00000546181 KRT24Q2M2I5 525 aa15.19■□□□□ 0.02
NECAP1-209ENST00000546181 LRP10Q7Z4F1 713 aa15.19■□□□□ 0.02
NECAP1-209ENST00000546181 ZNF34Q8IZ26 560 aa15.19■□□□□ 0.02
NECAP1-209ENST00000546181 ZNF428Q96B54 188 aa15.19■□□□□ 0.02
NECAP1-209ENST00000546181 TAF1DQ9H5J8 278 aaPredicted RBP15.19■□□□□ 0.02
NECAP1-209ENST00000546181 NTSR2O95665 410 aa15.18■□□□□ 0.02
NECAP1-209ENST00000546181 ALDH1B1P30837 517 aa15.18■□□□□ 0.02
NECAP1-209ENST00000546181 DDX10Q13206 875 aaKnown RBP15.18■□□□□ 0.02
NECAP1-209ENST00000546181 NEUROD2Q15784 382 aa15.18■□□□□ 0.02
NECAP1-209ENST00000546181 EAPPQ56P03 285 aaPredicted RBP15.18■□□□□ 0.02
NECAP1-209ENST00000546181 RTKN2Q8IZC4 609 aa15.18■□□□□ 0.02
NECAP1-209ENST00000546181 L3MBTL3Q96JM7 780 aaPredicted RBP15.18■□□□□ 0.02
NECAP1-209ENST00000546181 NYXQ9GZU5 481 aa15.18■□□□□ 0.02
NECAP1-209ENST00000546181 MKRN1Q9UHC7 482 aaKnown RBP15.18■□□□□ 0.02
NECAP1-209ENST00000546181 LAMB2P55268 1798 aa15.18■□□□□ 0.02
NECAP1-209ENST00000546181 ANKRD36CQ5JPF3 1778 aa15.18■□□□□ 0.02
NECAP1-209ENST00000546181 RNF123Q5XPI4 1314 aa15.17■□□□□ 0.02
NECAP1-209ENST00000546181 ADAMTSL1Q8N6G6 1762 aa15.17■□□□□ 0.02
NECAP1-209ENST00000546181 HSPA1AP0DMV8 641 aaKnown RBP15.17■□□□□ 0.02
NECAP1-209ENST00000546181 HSPA1BP0DMV9 641 aaKnown RBP15.17■□□□□ 0.02
NECAP1-209ENST00000546181 TMPOP42166 694 aaKnown RBP15.17■□□□□ 0.02
NECAP1-209ENST00000546181 GIGYF2Q6Y7W6 1299 aaKnown RBP15.17■□□□□ 0.02
NECAP1-209ENST00000546181 RPGRQ92834 1020 aaKnown RBP15.17■□□□□ 0.02
NECAP1-209ENST00000546181 CLEC11AQ9Y240 323 aa15.17■□□□□ 0.02
NECAP1-209ENST00000546181 LTBP1Q14766 1721 aa15.17■□□□□ 0.02
NECAP1-209ENST00000546181 IBTKQ9P2D0 1353 aaPredicted RBP15.16■□□□□ 0.02
NECAP1-209ENST00000546181 PNNQ9H307 717 aaKnown RBP15.16■□□□□ 0.02
NECAP1-209ENST00000546181 TAF1P21675 1872 aa15.16■□□□□ 0.02
NECAP1-209ENST00000546181 RIC1Q4ADV7 1423 aa15.16■□□□□ 0.02
NECAP1-209ENST00000546181 IQCA1LA6NCM1 817 aa15.15■□□□□ 0.02
NECAP1-209ENST00000546181 FZD9O00144 591 aa15.15■□□□□ 0.02
NECAP1-209ENST00000546181 HOXA10P31260 410 aaPredicted RBP15.15■□□□□ 0.02
NECAP1-209ENST00000546181 AIMP1Q12904 312 aaKnown RBP15.15■□□□□ 0.02
NECAP1-209ENST00000546181 LDHDQ86WU2 507 aa15.15■□□□□ 0.02
NECAP1-209ENST00000546181 SPDYE1Q8NFV5 336 aaPredicted RBP15.15■□□□□ 0.02
NECAP1-209ENST00000546181 PASKQ96RG2 1323 aa15.15■□□□□ 0.02
NECAP1-209ENST00000546181 PPEF1O14829 653 aaPredicted RBP15.14■□□□□ 0.01
NECAP1-209ENST00000546181 EPHX2P34913 555 aa15.14■□□□□ 0.01
NECAP1-209ENST00000546181 RALBP1Q15311 655 aa15.14■□□□□ 0.01
NECAP1-209ENST00000546181 PSMD1Q99460 953 aa15.14■□□□□ 0.01
NECAP1-209ENST00000546181 CREBZFQ9NS37 354 aa15.14■□□□□ 0.01
NECAP1-209ENST00000546181 HACL1Q9UJ83 578 aa15.14■□□□□ 0.01
NECAP1-209ENST00000546181 GJA3Q9Y6H8 435 aa15.14■□□□□ 0.01
NECAP1-209ENST00000546181 ERBB4Q15303 1308 aa15.14■□□□□ 0.01
NECAP1-209ENST00000546181 ITGBL1O95965 494 aaPredicted RBP15.13■□□□□ 0.01
NECAP1-209ENST00000546181 MAP1SQ66K74 1059 aaPredicted RBP15.13■□□□□ 0.01
NECAP1-209ENST00000546181 COPS6Q7L5N1 327 aa15.13■□□□□ 0.01
NECAP1-209ENST00000546181 XAGE3Q8WTP9 111 aa15.13■□□□□ 0.01
NECAP1-209ENST00000546181 LAS1LQ9Y4W2 734 aaKnown RBP15.13■□□□□ 0.01
NECAP1-209ENST00000546181 RBM17Q96I25 401 aaKnown RBP15.12■□□□□ 0.01
NECAP1-209ENST00000546181 CRAMP1Q96RY5 1269 aa15.12■□□□□ 0.01
NECAP1-209ENST00000546181 TRIM35Q9UPQ4 493 aa15.12■□□□□ 0.01
NECAP1-209ENST00000546181 ABCC4O15439 1325 aa15.12■□□□□ 0.01
NECAP1-209ENST00000546181 MYBBP1AQ9BQG0 1328 aaKnown RBP15.12■□□□□ 0.01
NECAP1-209ENST00000546181 HCLS1P14317 486 aaPredicted RBP15.11■□□□□ 0.01
NECAP1-209ENST00000546181 FMR1Q06787 632 aaKnown RBP eCLIP15.11■□□□□ 0.01
NECAP1-209ENST00000546181 PPP1R42Q7Z4L9 355 aa15.11■□□□□ 0.01
NECAP1-209ENST00000546181 TNS4Q8IZW8 715 aa15.11■□□□□ 0.01
NECAP1-209ENST00000546181 GPC2Q8N158 579 aa15.11■□□□□ 0.01
NECAP1-209ENST00000546181 LARGE2Q8N3Y3 721 aa15.11■□□□□ 0.01
NECAP1-209ENST00000546181 JDP2Q8WYK2 163 aa15.11■□□□□ 0.01
NECAP1-209ENST00000546181 UTP14AQ9BVJ6 771 aaKnown RBP15.11■□□□□ 0.01
NECAP1-209ENST00000546181 COL4A1P02462 1669 aa15.1■□□□□ 0.01
NECAP1-209ENST00000546181 EPS15P42566 896 aa15.1■□□□□ 0.01
NECAP1-209ENST00000546181 AOC3Q16853 763 aa15.1■□□□□ 0.01
NECAP1-209ENST00000546181 PARP10Q53GL7 1025 aa15.1■□□□□ 0.01
NECAP1-209ENST00000546181 CC2D2BQ6DHV5 1058 aa15.1■□□□□ 0.01
NECAP1-209ENST00000546181 NLRP10Q86W26 655 aa15.1■□□□□ 0.01
NECAP1-209ENST00000546181 NLRP3Q96P20 1036 aa15.1■□□□□ 0.01
NECAP1-209ENST00000546181 CHPF2Q9P2E5 772 aa15.1■□□□□ 0.01
NECAP1-209ENST00000546181 CNTNAP1P78357 1384 aa15.1■□□□□ 0.01
NECAP1-209ENST00000546181 DDX60Q8IY21 1712 aaKnown RBP15.09■□□□□ 0.01
NECAP1-209ENST00000546181 CHL1O00533 1208 aa15.09■□□□□ 0.01
NECAP1-209ENST00000546181 PPIP5K2O43314 1243 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms