RNA–Protein interactions for RNA: ENST00000544276.1

LMO3-230, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-230ENST00000544276 RPGRQ92834 1020 aaKnown RBP13.77□□□□□ -0.21
LMO3-230ENST00000544276 RUNDC1Q96C34 613 aa13.77□□□□□ -0.21
LMO3-230ENST00000544276 HOXB7P09629 217 aa13.76□□□□□ -0.21
LMO3-230ENST00000544276 EIF2S2P20042 333 aaKnown RBP13.76□□□□□ -0.21
LMO3-230ENST00000544276 HSP90AB3PQ58FF7 597 aa13.76□□□□□ -0.21
LMO3-230ENST00000544276 OLFM4Q6UX06 510 aa13.76□□□□□ -0.21
LMO3-230ENST00000544276 LDHDQ86WU2 507 aa13.76□□□□□ -0.21
LMO3-230ENST00000544276 RBM17Q96I25 401 aaKnown RBP13.76□□□□□ -0.21
LMO3-230ENST00000544276 TAF1DQ9H5J8 278 aaPredicted RBP13.76□□□□□ -0.21
LMO3-230ENST00000544276 WDR43Q15061 677 aaKnown RBP eCLIP13.75□□□□□ -0.21
LMO3-230ENST00000544276 NLRP3Q96P20 1036 aa13.75□□□□□ -0.21
LMO3-230ENST00000544276 UTP14AQ9BVJ6 771 aaKnown RBP13.75□□□□□ -0.21
LMO3-230ENST00000544276 DDX21Q9NR30 783 aaKnown RBP eCLIP13.75□□□□□ -0.21
LMO3-230ENST00000544276 CREBZFQ9NS37 354 aa13.75□□□□□ -0.21
LMO3-230ENST00000544276 TRIM35Q9UPQ4 493 aa13.75□□□□□ -0.21
LMO3-230ENST00000544276 DLG5Q8TDM6 1919 aa13.74□□□□□ -0.21
LMO3-230ENST00000544276 ZNF541Q9H0D2 1346 aa13.74□□□□□ -0.21
LMO3-230ENST00000544276 PROSER3Q2NL68 480 aa13.74□□□□□ -0.21
LMO3-230ENST00000544276 GPC2Q8N158 579 aa13.74□□□□□ -0.21
LMO3-230ENST00000544276 JDP2Q8WYK2 163 aa13.74□□□□□ -0.21
LMO3-230ENST00000544276 VPS33BQ9H267 617 aa13.74□□□□□ -0.21
LMO3-230ENST00000544276 HACL1Q9UJ83 578 aa13.74□□□□□ -0.21
LMO3-230ENST00000544276 DICER1Q9UPY3 1922 aaKnown RBP13.73□□□□□ -0.21
LMO3-230ENST00000544276 POTEIP0CG38 1075 aa13.73□□□□□ -0.21
LMO3-230ENST00000544276 POTEJP0CG39 1038 aa13.73□□□□□ -0.21
LMO3-230ENST00000544276 COPS6Q7L5N1 327 aa13.73□□□□□ -0.21
LMO3-230ENST00000544276 PNMA8AQ86V59 439 aaPredicted RBP13.73□□□□□ -0.21
LMO3-230ENST00000544276 CCDC146Q8IYE0 955 aa13.73□□□□□ -0.21
LMO3-230ENST00000544276 ADAMTS8Q9UP79 889 aa13.73□□□□□ -0.21
LMO3-230ENST00000544276 PCNTO95613 3336 aa13.72□□□□□ -0.21
LMO3-230ENST00000544276 PASKQ96RG2 1323 aa13.72□□□□□ -0.21
LMO3-230ENST00000544276 PPEF1O14829 653 aaPredicted RBP13.72□□□□□ -0.21
LMO3-230ENST00000544276 EPHX2P34913 555 aa13.72□□□□□ -0.21
LMO3-230ENST00000544276 TCIRG1Q13488 830 aa13.72□□□□□ -0.21
LMO3-230ENST00000544276 NEUROD2Q15784 382 aa13.72□□□□□ -0.21
LMO3-230ENST00000544276 C3orf67Q6ZVT6 689 aa13.72□□□□□ -0.21
LMO3-230ENST00000544276 NLRP10Q86W26 655 aa13.72□□□□□ -0.21
LMO3-230ENST00000544276 XAGE3Q8WTP9 111 aa13.72□□□□□ -0.21
LMO3-230ENST00000544276 CFAP44Q96MT7 982 aa13.72□□□□□ -0.21
LMO3-230ENST00000544276 TMX4Q9H1E5 349 aaPredicted RBP13.72□□□□□ -0.21
LMO3-230ENST00000544276 PRKRIP1Q9H875 184 aaPredicted RBP13.72□□□□□ -0.21
LMO3-230ENST00000544276 ATP6V0A2Q9Y487 856 aa13.72□□□□□ -0.21
LMO3-230ENST00000544276 BBOX1O75936 387 aa13.71□□□□□ -0.21
LMO3-230ENST00000544276 ANXA1P04083 346 aa13.71□□□□□ -0.21
LMO3-230ENST00000544276 EIF6P56537 245 aaKnown RBP13.71□□□□□ -0.21
LMO3-230ENST00000544276 ITGBL1O95965 494 aaPredicted RBP13.7□□□□□ -0.22
LMO3-230ENST00000544276 PLBD2Q8NHP8 589 aa13.7□□□□□ -0.22
LMO3-230ENST00000544276 RTFDC1Q9BY42 306 aaPredicted RBP13.7□□□□□ -0.22
LMO3-230ENST00000544276 CHPF2Q9P2E5 772 aa13.7□□□□□ -0.22
LMO3-230ENST00000544276 DBF4Q9UBU7 674 aaPredicted RBP13.7□□□□□ -0.22
LMO3-230ENST00000544276 SH3TC1Q8TE82 1336 aa13.69□□□□□ -0.22
LMO3-230ENST00000544276 ZNF853P0CG23 659 aa13.69□□□□□ -0.22
LMO3-230ENST00000544276 AIMP1Q12904 312 aaKnown RBP13.69□□□□□ -0.22
LMO3-230ENST00000544276 KRT24Q2M2I5 525 aa13.69□□□□□ -0.22
LMO3-230ENST00000544276 HDGFL1Q5TGJ6 251 aa13.69□□□□□ -0.22
LMO3-230ENST00000544276 SP8Q8IXZ3 490 aa13.69□□□□□ -0.22
LMO3-230ENST00000544276 LARGE2Q8N3Y3 721 aa13.69□□□□□ -0.22
LMO3-230ENST00000544276 SUPT20HQ8NEM7 779 aa13.69□□□□□ -0.22
LMO3-230ENST00000544276 CCDC88AQ3V6T2 1871 aa13.69□□□□□ -0.22
LMO3-230ENST00000544276 ABCC4O15439 1325 aa13.68□□□□□ -0.22
LMO3-230ENST00000544276 CALD1Q05682 793 aaKnown RBP13.68□□□□□ -0.22
LMO3-230ENST00000544276 EAPPQ56P03 285 aaPredicted RBP13.68□□□□□ -0.22
LMO3-230ENST00000544276 ANKRD13DQ6ZTN6 518 aa13.68□□□□□ -0.22
LMO3-230ENST00000544276 TMC4Q7Z404 712 aa13.68□□□□□ -0.22
LMO3-230ENST00000544276 NECTIN2Q92692 538 aa13.68□□□□□ -0.22
LMO3-230ENST00000544276 HYPKQ9NX55 129 aa13.68□□□□□ -0.22
LMO3-230ENST00000544276 TRMT112Q9UI30 125 aaKnown RBP13.68□□□□□ -0.22
LMO3-230ENST00000544276 LAS1LQ9Y4W2 734 aaKnown RBP13.68□□□□□ -0.22
LMO3-230ENST00000544276 NUP98P52948 1817 aa13.68□□□□□ -0.22
LMO3-230ENST00000544276 SCN4AP35499 1836 aa13.67□□□□□ -0.22
LMO3-230ENST00000544276 TMEM88BA6NKF7 163 aa13.67□□□□□ -0.22
LMO3-230ENST00000544276 HCLS1P14317 486 aaPredicted RBP13.67□□□□□ -0.22
LMO3-230ENST00000544276 TRIM28Q13263 835 aaKnown RBP13.67□□□□□ -0.22
LMO3-230ENST00000544276 GRAPQ13588 217 aa13.67□□□□□ -0.22
LMO3-230ENST00000544276 DDX46Q7L014 1031 aaKnown RBP13.67□□□□□ -0.22
LMO3-230ENST00000544276 NIM1KQ8IY84 436 aa13.67□□□□□ -0.22
LMO3-230ENST00000544276 GRAPLQ8TC17 118 aaPredicted RBP13.67□□□□□ -0.22
LMO3-230ENST00000544276 ISCA1Q9BUE6 129 aa13.67□□□□□ -0.22
LMO3-230ENST00000544276 IFT57Q9NWB7 429 aa13.67□□□□□ -0.22
LMO3-230ENST00000544276 CNTNAP1P78357 1384 aa13.67□□□□□ -0.22
LMO3-230ENST00000544276 COL4A5P29400 1685 aa13.66□□□□□ -0.22
LMO3-230ENST00000544276 PPIP5K2O43314 1243 aa13.66□□□□□ -0.22
LMO3-230ENST00000544276 HSPA1AP0DMV8 641 aaKnown RBP13.66□□□□□ -0.22
LMO3-230ENST00000544276 HSPA1BP0DMV9 641 aaKnown RBP13.66□□□□□ -0.22
LMO3-230ENST00000544276 LMOD1P29536 600 aaPredicted RBP13.66□□□□□ -0.22
LMO3-230ENST00000544276 SCNN1DP51172 638 aa13.66□□□□□ -0.22
LMO3-230ENST00000544276 COL13A1Q5TAT6 717 aaPredicted RBP13.66□□□□□ -0.22
LMO3-230ENST00000544276 DUSP27Q5VZP5 1158 aa13.66□□□□□ -0.22
LMO3-230ENST00000544276 CNTROBQ8N137 903 aa13.66□□□□□ -0.22
LMO3-230ENST00000544276 MBIPQ9NS73 344 aa13.66□□□□□ -0.22
LMO3-230ENST00000544276 CLEC11AQ9Y240 323 aa13.66□□□□□ -0.22
LMO3-230ENST00000544276 TCERG1O14776 1098 aaKnown RBP13.65□□□□□ -0.22
LMO3-230ENST00000544276 GNAI1P63096 354 aa13.65□□□□□ -0.22
LMO3-230ENST00000544276 SF3B3Q15393 1217 aaKnown RBP13.65□□□□□ -0.22
LMO3-230ENST00000544276 DPP8Q6V1X1 898 aaPredicted RBP13.65□□□□□ -0.22
LMO3-230ENST00000544276 USP50Q70EL3 339 aaPredicted RBP13.65□□□□□ -0.22
LMO3-230ENST00000544276 MPNDQ8N594 471 aa13.65□□□□□ -0.22
LMO3-230ENST00000544276 CHMP4AQ9BY43 222 aa13.65□□□□□ -0.22
LMO3-230ENST00000544276 ZNRF3Q9ULT6 936 aa13.65□□□□□ -0.22
LMO3-230ENST00000544276 GJA3Q9Y6H8 435 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms