RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 PSDA5PKW4 1024 aaPredicted RBP21.48■■□□□ 1.03
CCT4-204ENST00000544079 FBLN1P23142 703 aa21.48■■□□□ 1.03
CCT4-204ENST00000544079 CTR9Q6PD62 1173 aa21.47■■□□□ 1.03
CCT4-204ENST00000544079 RUFY2Q8WXA3 655 aa21.47■■□□□ 1.03
CCT4-204ENST00000544079 GPS2Q13227 327 aa21.46■■□□□ 1.03
CCT4-204ENST00000544079 SNW1Q13573 536 aaKnown RBP21.46■■□□□ 1.03
CCT4-204ENST00000544079 OSBPL5Q9H0X9 879 aaPredicted RBP21.46■■□□□ 1.03
CCT4-204ENST00000544079 TPM1P09493 284 aa21.46■■□□□ 1.03
CCT4-204ENST00000544079 STX1AQ16623 288 aa21.46■■□□□ 1.03
CCT4-204ENST00000544079 ME3Q16798 604 aa21.46■■□□□ 1.03
CCT4-204ENST00000544079 CDC37L1Q7L3B6 337 aa21.46■■□□□ 1.03
CCT4-204ENST00000544079 RASSF4Q9H2L5 321 aa21.46■■□□□ 1.03
CCT4-204ENST00000544079 ERCC6LQ2NKX8 1250 aa21.45■■□□□ 1.02
CCT4-204ENST00000544079 TMCO3Q6UWJ1 677 aa21.45■■□□□ 1.02
CCT4-204ENST00000544079 SSH3Q8TE77 659 aa21.45■■□□□ 1.02
CCT4-204ENST00000544079 GTF3C6Q969F1 213 aa21.45■■□□□ 1.02
CCT4-204ENST00000544079 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.45■■□□□ 1.02
CCT4-204ENST00000544079 USP42Q9H9J4 1324 aaKnown RBP21.45■■□□□ 1.02
CCT4-204ENST00000544079 F6X3S4 739 aa21.45■■□□□ 1.02
CCT4-204ENST00000544079 G2E3Q7L622 706 aa21.45■■□□□ 1.02
CCT4-204ENST00000544079 JAKMIP1Q96N16 626 aaKnown RBP21.45■■□□□ 1.02
CCT4-204ENST00000544079 LARP6Q9BRS8 491 aaKnown RBP21.45■■□□□ 1.02
CCT4-204ENST00000544079 SRRTQ9BXP5 876 aaKnown RBP21.45■■□□□ 1.02
CCT4-204ENST00000544079 ALDH8A1Q9H2A2 487 aaPredicted RBP21.45■■□□□ 1.02
CCT4-204ENST00000544079 CHMP3Q9Y3E7 222 aa21.45■■□□□ 1.02
CCT4-204ENST00000544079 NR1I2O75469 434 aa21.44■■□□□ 1.02
CCT4-204ENST00000544079 NUTM2DQ5VT03 806 aaPredicted RBP21.44■■□□□ 1.02
CCT4-204ENST00000544079 MAP3K5Q99683 1374 aa21.44■■□□□ 1.02
CCT4-204ENST00000544079 CWC15Q9P013 229 aaKnown RBP21.44■■□□□ 1.02
CCT4-204ENST00000544079 ARID5BQ14865 1188 aa21.43■■□□□ 1.02
CCT4-204ENST00000544079 CACNA1FO60840 1977 aa21.43■■□□□ 1.02
CCT4-204ENST00000544079 ANKRD1Q15327 319 aa21.43■■□□□ 1.02
CCT4-204ENST00000544079 MLH3Q9UHC1 1453 aa21.42■■□□□ 1.02
CCT4-204ENST00000544079 CCDC150Q8NCX0 1101 aa21.42■■□□□ 1.02
CCT4-204ENST00000544079 TRMT1Q9NXH9 659 aaKnown RBP21.42■■□□□ 1.02
CCT4-204ENST00000544079 CCP110O43303 1012 aa21.41■■□□□ 1.02
CCT4-204ENST00000544079 ARHGAP29Q52LW3 1261 aa21.41■■□□□ 1.02
CCT4-204ENST00000544079 BICD2Q8TD16 824 aa21.41■■□□□ 1.02
CCT4-204ENST00000544079 PSD3Q9NYI0 1048 aa21.41■■□□□ 1.02
CCT4-204ENST00000544079 FAM208AQ9UK61 1670 aaKnown RBP21.41■■□□□ 1.02
CCT4-204ENST00000544079 TTC41PQ6P2S7 1318 aa21.41■■□□□ 1.02
CCT4-204ENST00000544079 PHLPP2Q6ZVD8 1323 aa21.41■■□□□ 1.02
CCT4-204ENST00000544079 CPA1P15085 419 aa21.41■■□□□ 1.02
CCT4-204ENST00000544079 PGBD1Q96JS3 809 aa21.41■■□□□ 1.02
CCT4-204ENST00000544079 ORC3Q9UBD5 711 aaPredicted RBP21.41■■□□□ 1.02
CCT4-204ENST00000544079 ZKSCAN1P17029 563 aaPredicted RBP21.4■■□□□ 1.02
CCT4-204ENST00000544079 PPP1R13BQ96KQ4 1090 aa21.4■■□□□ 1.02
CCT4-204ENST00000544079 STK31Q9BXU1 1019 aa21.4■■□□□ 1.02
CCT4-204ENST00000544079 PSMA5P28066 241 aa21.4■■□□□ 1.02
CCT4-204ENST00000544079 TNNT3P45378 269 aaPredicted RBP21.4■■□□□ 1.02
CCT4-204ENST00000544079 POLA2Q14181 598 aa21.4■■□□□ 1.02
CCT4-204ENST00000544079 NUTM1Q86Y26 1132 aa21.4■■□□□ 1.02
CCT4-204ENST00000544079 SLC52A1Q9NWF4 448 aa21.4■■□□□ 1.02
CCT4-204ENST00000544079 USP16Q9Y5T5 823 aa21.4■■□□□ 1.02
CCT4-204ENST00000544079 LRRFIP2Q9Y608 721 aaKnown RBP21.4■■□□□ 1.02
CCT4-204ENST00000544079 MON2Q7Z3U7 1717 aa21.4■■□□□ 1.02
CCT4-204ENST00000544079 BECN2A8MW95 431 aa21.39■■□□□ 1.02
CCT4-204ENST00000544079 NRDCO43847 1150 aa21.39■■□□□ 1.02
CCT4-204ENST00000544079 NECTIN1Q15223 517 aa21.39■■□□□ 1.02
CCT4-204ENST00000544079 ADCK5Q3MIX3 580 aa21.39■■□□□ 1.02
CCT4-204ENST00000544079 E4F1Q66K89 784 aaPredicted RBP21.39■■□□□ 1.02
CCT4-204ENST00000544079 MCM10Q7L590 875 aa21.39■■□□□ 1.02
CCT4-204ENST00000544079 FERMT3Q86UX7 667 aa21.39■■□□□ 1.02
CCT4-204ENST00000544079 UBXN4Q92575 508 aa21.39■■□□□ 1.02
CCT4-204ENST00000544079 ANO10Q9NW15 660 aa21.39■■□□□ 1.02
CCT4-204ENST00000544079 TPCN1Q9ULQ1 816 aa21.39■■□□□ 1.02
CCT4-204ENST00000544079 CWC27Q6UX04 472 aaKnown RBP21.39■■□□□ 1.01
CCT4-204ENST00000544079 C11orf57Q6ZUT1 292 aaPredicted RBP21.39■■□□□ 1.01
CCT4-204ENST00000544079 IQUBQ8NA54 791 aa21.39■■□□□ 1.01
CCT4-204ENST00000544079 RHPN1Q8TCX5 695 aa21.39■■□□□ 1.01
CCT4-204ENST00000544079 COG3Q96JB2 828 aa21.39■■□□□ 1.01
CCT4-204ENST00000544079 IL1RAPL2Q9NP60 686 aa21.39■■□□□ 1.01
CCT4-204ENST00000544079 ALKQ9UM73 1620 aa21.38■■□□□ 1.01
CCT4-204ENST00000544079 NOP2P46087 812 aaKnown RBP21.38■■□□□ 1.01
CCT4-204ENST00000544079 KRBA2Q6ZNG9 492 aa21.38■■□□□ 1.01
CCT4-204ENST00000544079 NECAB1Q8N987 351 aa21.38■■□□□ 1.01
CCT4-204ENST00000544079 SPG7Q9UQ90 795 aa21.38■■□□□ 1.01
CCT4-204ENST00000544079 TMEM131LA2VDJ0 1609 aa21.38■■□□□ 1.01
CCT4-204ENST00000544079 GLRX3O76003 335 aaKnown RBP21.38■■□□□ 1.01
CCT4-204ENST00000544079 CCDC158Q5M9N0 1113 aa21.38■■□□□ 1.01
CCT4-204ENST00000544079 DHX40Q8IX18 779 aaKnown RBP21.38■■□□□ 1.01
CCT4-204ENST00000544079 CFAP45Q9UL16 551 aa21.38■■□□□ 1.01
CCT4-204ENST00000544079 RGPD1P0DJD0 1748 aa21.37■■□□□ 1.01
CCT4-204ENST00000544079 FLIIQ13045 1269 aa21.37■■□□□ 1.01
CCT4-204ENST00000544079 PRPF40BQ6NWY9 871 aaKnown RBP21.37■■□□□ 1.01
CCT4-204ENST00000544079 FAM173BQ6P4H8 233 aa21.37■■□□□ 1.01
CCT4-204ENST00000544079 SYT10Q6XYQ8 523 aa21.37■■□□□ 1.01
CCT4-204ENST00000544079 NEK11Q8NG66 645 aa21.37■■□□□ 1.01
CCT4-204ENST00000544079 GOLGA5Q8TBA6 731 aa21.37■■□□□ 1.01
CCT4-204ENST00000544079 TRERF1Q96PN7 1200 aa21.37■■□□□ 1.01
CCT4-204ENST00000544079 GEMIN8Q9NWZ8 242 aaKnown RBP21.37■■□□□ 1.01
CCT4-204ENST00000544079 RSPH14Q9UHP6 348 aa21.37■■□□□ 1.01
CCT4-204ENST00000544079 EFCAB8A8MWE9 144 aa21.36■■□□□ 1.01
CCT4-204ENST00000544079 GGT6Q6P531 493 aa21.36■■□□□ 1.01
CCT4-204ENST00000544079 NME9Q86XW9 330 aa21.36■■□□□ 1.01
CCT4-204ENST00000544079 NFATC2IPQ8NCF5 419 aa21.36■■□□□ 1.01
CCT4-204ENST00000544079 NAT10Q9H0A0 1025 aaKnown RBP21.36■■□□□ 1.01
CCT4-204ENST00000544079 ZSCAN16Q9H4T2 348 aaPredicted RBP21.36■■□□□ 1.01
CCT4-204ENST00000544079 TFIP11Q9UBB9 837 aaKnown RBP21.36■■□□□ 1.01
CCT4-204ENST00000544079 ADCY9O60503 1353 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms