RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 CASTP20810 708 aaKnown RBP12.63□□□□□ -0.39
PHACTR3-209ENST00000541461 NOLC1Q14978 699 aaKnown RBP eCLIP12.63□□□□□ -0.39
PHACTR3-209ENST00000541461 CNTROBQ8N137 903 aa12.63□□□□□ -0.39
PHACTR3-209ENST00000541461 PIBF1Q8WXW3 757 aa12.63□□□□□ -0.39
PHACTR3-209ENST00000541461 TSC1Q92574 1164 aa12.63□□□□□ -0.39
PHACTR3-209ENST00000541461 NGLY1Q96IV0 654 aa12.63□□□□□ -0.39
PHACTR3-209ENST00000541461 LRRC37A3O60309 1634 aa12.63□□□□□ -0.39
PHACTR3-209ENST00000541461 LRP6O75581 1613 aa12.63□□□□□ -0.39
PHACTR3-209ENST00000541461 COL5A2P05997 1499 aaPredicted RBP12.63□□□□□ -0.39
PHACTR3-209ENST00000541461 ABCC6O95255 1503 aa12.63□□□□□ -0.39
PHACTR3-209ENST00000541461 PLCB2Q00722 1185 aa12.62□□□□□ -0.39
PHACTR3-209ENST00000541461 GIMAP6Q6P9H5 292 aa12.62□□□□□ -0.39
PHACTR3-209ENST00000541461 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.62□□□□□ -0.39
PHACTR3-209ENST00000541461 N4BP2Q86UW6 1770 aaPredicted RBP12.62□□□□□ -0.39
PHACTR3-209ENST00000541461 LETM1O95202 739 aaPredicted RBP12.62□□□□□ -0.39
PHACTR3-209ENST00000541461 MEX3CQ5U5Q3 659 aaKnown RBP12.62□□□□□ -0.39
PHACTR3-209ENST00000541461 CCDC83Q8IWF9 413 aa12.62□□□□□ -0.39
PHACTR3-209ENST00000541461 MYRIPQ8NFW9 859 aa12.62□□□□□ -0.39
PHACTR3-209ENST00000541461 KIF1BPQ96EK5 621 aa12.62□□□□□ -0.39
PHACTR3-209ENST00000541461 WDR17Q8IZU2 1322 aa12.62□□□□□ -0.39
PHACTR3-209ENST00000541461 MAP3K5Q99683 1374 aa12.62□□□□□ -0.39
PHACTR3-209ENST00000541461 PXDNLA1KZ92 1463 aa12.61□□□□□ -0.39
PHACTR3-209ENST00000541461 KDM4AO75164 1064 aa12.61□□□□□ -0.39
PHACTR3-209ENST00000541461 PTH1RQ03431 593 aa12.61□□□□□ -0.39
PHACTR3-209ENST00000541461 DNM1Q05193 864 aaKnown RBP12.61□□□□□ -0.39
PHACTR3-209ENST00000541461 HYPKQ9NX55 129 aa12.61□□□□□ -0.39
PHACTR3-209ENST00000541461 AP5Z1O43299 807 aa12.61□□□□□ -0.39
PHACTR3-209ENST00000541461 GJB2P29033 226 aa12.61□□□□□ -0.39
PHACTR3-209ENST00000541461 ADCK5Q3MIX3 580 aa12.61□□□□□ -0.39
PHACTR3-209ENST00000541461 DDX54Q8TDD1 881 aaKnown RBP12.61□□□□□ -0.39
PHACTR3-209ENST00000541461 COL14A1Q05707 1796 aaKnown RBP12.61□□□□□ -0.39
PHACTR3-209ENST00000541461 MTERF4Q7Z6M4 381 aaKnown RBP12.6□□□□□ -0.39
PHACTR3-209ENST00000541461 FUCA2Q9BTY2 467 aa12.6□□□□□ -0.39
PHACTR3-209ENST00000541461 PRPF40BQ6NWY9 871 aaKnown RBP12.6□□□□□ -0.39
PHACTR3-209ENST00000541461 JAKMIP1Q96N16 626 aaKnown RBP12.6□□□□□ -0.39
PHACTR3-209ENST00000541461 CHMP4AQ9BY43 222 aa12.6□□□□□ -0.39
PHACTR3-209ENST00000541461 MTMR6Q9Y217 621 aa12.6□□□□□ -0.39
PHACTR3-209ENST00000541461 PI4KAP2A4QPH2 592 aa12.59□□□□□ -0.39
PHACTR3-209ENST00000541461 ANXA1P04083 346 aa12.59□□□□□ -0.39
PHACTR3-209ENST00000541461 PI4KAP1Q8N8J0 262 aa12.59□□□□□ -0.39
PHACTR3-209ENST00000541461 DIAPH3Q9NSV4 1193 aa12.59□□□□□ -0.39
PHACTR3-209ENST00000541461 PDRG1Q9NUG6 133 aa12.59□□□□□ -0.39
PHACTR3-209ENST00000541461 ATP6V1DQ9Y5K8 247 aa12.59□□□□□ -0.39
PHACTR3-209ENST00000541461 FAM177BA6PVY3 158 aa12.59□□□□□ -0.39
PHACTR3-209ENST00000541461 MEGF6O75095 1541 aa12.59□□□□□ -0.39
PHACTR3-209ENST00000541461 OS9Q13438 667 aaPredicted RBP12.59□□□□□ -0.39
PHACTR3-209ENST00000541461 BEND3Q5T5X7 828 aa12.59□□□□□ -0.39
PHACTR3-209ENST00000541461 CHPF2Q9P2E5 772 aa12.59□□□□□ -0.39
PHACTR3-209ENST00000541461 PLCH1Q4KWH8 1693 aa12.58□□□□□ -0.4
PHACTR3-209ENST00000541461 SLIT2O94813 1529 aa12.58□□□□□ -0.4
PHACTR3-209ENST00000541461 ST3GAL1Q11201 340 aa12.58□□□□□ -0.4
PHACTR3-209ENST00000541461 FNBP4Q8N3X1 1017 aaPredicted RBP12.58□□□□□ -0.4
PHACTR3-209ENST00000541461 NECAB1Q8N987 351 aa12.58□□□□□ -0.4
PHACTR3-209ENST00000541461 PRIMPOLQ96LW4 560 aa12.58□□□□□ -0.4
PHACTR3-209ENST00000541461 VPS37CA5D8V6 355 aaPredicted RBP12.57□□□□□ -0.4
PHACTR3-209ENST00000541461 ZNF710Q8N1W2 664 aa12.57□□□□□ -0.4
PHACTR3-209ENST00000541461 DNAAF4Q8WXU2 420 aa12.57□□□□□ -0.4
PHACTR3-209ENST00000541461 RAPGEF4Q8WZA2 1011 aa12.57□□□□□ -0.4
PHACTR3-209ENST00000541461 CARD10Q9BWT7 1032 aa12.57□□□□□ -0.4
PHACTR3-209ENST00000541461 BABAM1Q9NWV8 329 aa12.57□□□□□ -0.4
PHACTR3-209ENST00000541461 KCNQ3O43525 872 aa12.57□□□□□ -0.4
PHACTR3-209ENST00000541461 GLRX3O76003 335 aaKnown RBP12.57□□□□□ -0.4
PHACTR3-209ENST00000541461 ME3Q16798 604 aa12.57□□□□□ -0.4
PHACTR3-209ENST00000541461 VPS53Q5VIR6 699 aa12.57□□□□□ -0.4
PHACTR3-209ENST00000541461 LGR6Q9HBX8 967 aa12.57□□□□□ -0.4
PHACTR3-209ENST00000541461 SPTLC3Q9NUV7 552 aa12.57□□□□□ -0.4
PHACTR3-209ENST00000541461 CCDC9Q9Y3X0 531 aaKnown RBP12.57□□□□□ -0.4
PHACTR3-209ENST00000541461 EIF4A1P60842 406 aaKnown RBP12.56□□□□□ -0.4
PHACTR3-209ENST00000541461 SPC24Q8NBT2 197 aa12.56□□□□□ -0.4
PHACTR3-209ENST00000541461 KCNF1Q9H3M0 494 aa12.56□□□□□ -0.4
PHACTR3-209ENST00000541461 ZSWIM6Q9HCJ5 1215 aa12.56□□□□□ -0.4
PHACTR3-209ENST00000541461 USP21Q9UK80 565 aa12.56□□□□□ -0.4
PHACTR3-209ENST00000541461 CHMP3Q9Y3E7 222 aa12.56□□□□□ -0.4
PHACTR3-209ENST00000541461 CYP46A1Q9Y6A2 500 aa12.56□□□□□ -0.4
PHACTR3-209ENST00000541461 BCL9LQ86UU0 1499 aa12.56□□□□□ -0.4
PHACTR3-209ENST00000541461 NCAPD2Q15021 1401 aa12.56□□□□□ -0.4
PHACTR3-209ENST00000541461 TTC41PQ6P2S7 1318 aa12.56□□□□□ -0.4
PHACTR3-209ENST00000541461 USP42Q9H9J4 1324 aaKnown RBP12.56□□□□□ -0.4
PHACTR3-209ENST00000541461 HMGN5P82970 282 aaKnown RBP12.56□□□□□ -0.4
PHACTR3-209ENST00000541461 COL9A3Q14050 684 aaPredicted RBP12.56□□□□□ -0.4
PHACTR3-209ENST00000541461 HSP90AB4PQ58FF6 505 aa12.56□□□□□ -0.4
PHACTR3-209ENST00000541461 ZNF530Q6P9A1 599 aaPredicted RBP12.56□□□□□ -0.4
PHACTR3-209ENST00000541461 RUFY2Q8WXA3 655 aa12.56□□□□□ -0.4
PHACTR3-209ENST00000541461 PRDM4Q9UKN5 801 aa12.56□□□□□ -0.4
PHACTR3-209ENST00000541461 PYCARDQ9ULZ3 195 aa12.56□□□□□ -0.4
PHACTR3-209ENST00000541461 PA2G4Q9UQ80 394 aaKnown RBP12.56□□□□□ -0.4
PHACTR3-209ENST00000541461 CLASRPQ8N2M8 674 aaKnown RBP12.55□□□□□ -0.4
PHACTR3-209ENST00000541461 ZSCAN31Q96LW9 406 aaPredicted RBP12.55□□□□□ -0.4
PHACTR3-209ENST00000541461 CCDC94Q9BW85 323 aaPredicted RBP12.55□□□□□ -0.4
PHACTR3-209ENST00000541461 PRDM10Q9NQV6 1147 aa12.55□□□□□ -0.4
PHACTR3-209ENST00000541461 AFF2P51816 1311 aa12.55□□□□□ -0.4
PHACTR3-209ENST00000541461 TATP17735 454 aaPredicted RBP12.55□□□□□ -0.4
PHACTR3-209ENST00000541461 GTF2F1P35269 517 aaKnown RBP eCLIP12.55□□□□□ -0.4
PHACTR3-209ENST00000541461 FAM173BQ6P4H8 233 aa12.55□□□□□ -0.4
PHACTR3-209ENST00000541461 MPRIPQ6WCQ1 1025 aa12.55□□□□□ -0.4
PHACTR3-209ENST00000541461 FERMT3Q86UX7 667 aa12.55□□□□□ -0.4
PHACTR3-209ENST00000541461 SH2B1Q9NRF2 756 aaPredicted RBP12.55□□□□□ -0.4
PHACTR3-209ENST00000541461 ECHDC1Q9NTX5 307 aa12.55□□□□□ -0.4
PHACTR3-209ENST00000541461 TPCN1Q9ULQ1 816 aa12.55□□□□□ -0.4
PHACTR3-209ENST00000541461 EP400Q96L91 3159 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms