RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 VEGFBP49765 207 aa16.48■□□□□ 0.23
COPS7A-211ENST00000540408 EIF4A1P60842 406 aaKnown RBP16.48■□□□□ 0.23
COPS7A-211ENST00000540408 PRDM10Q9NQV6 1147 aa16.48■□□□□ 0.23
COPS7A-211ENST00000540408 GJA3Q9Y6H8 435 aa16.48■□□□□ 0.23
COPS7A-211ENST00000540408 MAPK8IP3Q9UPT6 1336 aa16.47■□□□□ 0.23
COPS7A-211ENST00000540408 FOXN1O15353 648 aa16.47■□□□□ 0.23
COPS7A-211ENST00000540408 HOXA10P31260 410 aaPredicted RBP16.47■□□□□ 0.23
COPS7A-211ENST00000540408 NFE2L2Q16236 605 aa16.47■□□□□ 0.23
COPS7A-211ENST00000540408 DEFB115Q30KQ5 88 aa16.47■□□□□ 0.23
COPS7A-211ENST00000540408 MAP1SQ66K74 1059 aaPredicted RBP16.47■□□□□ 0.23
COPS7A-211ENST00000540408 TTLL7Q6ZT98 887 aa16.47■□□□□ 0.23
COPS7A-211ENST00000540408 PPP1R42Q7Z4L9 355 aa16.47■□□□□ 0.23
COPS7A-211ENST00000540408 LARGE2Q8N3Y3 721 aa16.47■□□□□ 0.23
COPS7A-211ENST00000540408 ZBTB3Q9H5J0 574 aa16.47■□□□□ 0.23
COPS7A-211ENST00000540408 CRAMP1Q96RY5 1269 aa16.46■□□□□ 0.23
COPS7A-211ENST00000540408 ERBB4Q15303 1308 aa16.45■□□□□ 0.22
COPS7A-211ENST00000540408 SUSD4Q5VX71 490 aa16.45■□□□□ 0.22
COPS7A-211ENST00000540408 GIGYF2Q6Y7W6 1299 aaKnown RBP16.45■□□□□ 0.22
COPS7A-211ENST00000540408 NLRP3Q96P20 1036 aa16.45■□□□□ 0.22
COPS7A-211ENST00000540408 ABT1Q9ULW3 272 aaKnown RBP16.45■□□□□ 0.22
COPS7A-211ENST00000540408 ABCC12Q96J65 1359 aa16.45■□□□□ 0.22
COPS7A-211ENST00000540408 IBTKQ9P2D0 1353 aaPredicted RBP16.45■□□□□ 0.22
COPS7A-211ENST00000540408 LAMB4A4D0S4 1761 aa16.44■□□□□ 0.22
COPS7A-211ENST00000540408 RASSF10A6NK89 507 aa16.44■□□□□ 0.22
COPS7A-211ENST00000540408 TCERG1O14776 1098 aaKnown RBP16.44■□□□□ 0.22
COPS7A-211ENST00000540408 PPEF1O14829 653 aaPredicted RBP16.44■□□□□ 0.22
COPS7A-211ENST00000540408 MAP2K1Q02750 393 aaPredicted RBP16.44■□□□□ 0.22
COPS7A-211ENST00000540408 PARP10Q53GL7 1025 aa16.44■□□□□ 0.22
COPS7A-211ENST00000540408 ZNF34Q8IZ26 560 aa16.44■□□□□ 0.22
COPS7A-211ENST00000540408 PLEKHF1Q96S99 279 aa16.44■□□□□ 0.22
COPS7A-211ENST00000540408 NIM1KQ8IY84 436 aa16.43■□□□□ 0.22
COPS7A-211ENST00000540408 THUMPD2Q9BTF0 503 aaKnown RBP16.43■□□□□ 0.22
COPS7A-211ENST00000540408 VPS33BQ9H267 617 aa16.43■□□□□ 0.22
COPS7A-211ENST00000540408 WBP1LQ9NX94 342 aa16.43■□□□□ 0.22
COPS7A-211ENST00000540408 TSPYL4Q9UJ04 414 aa16.43■□□□□ 0.22
COPS7A-211ENST00000540408 RIC1Q4ADV7 1423 aa16.43■□□□□ 0.22
COPS7A-211ENST00000540408 UBN2Q6ZU65 1347 aa16.43■□□□□ 0.22
COPS7A-211ENST00000540408 USP50Q70EL3 339 aaPredicted RBP16.42■□□□□ 0.22
COPS7A-211ENST00000540408 DDX21Q9NR30 783 aaKnown RBP eCLIP16.42■□□□□ 0.22
COPS7A-211ENST00000540408 NUP98P52948 1817 aa16.42■□□□□ 0.22
COPS7A-211ENST00000540408 WDR33Q9C0J8 1336 aaKnown RBP16.42■□□□□ 0.22
COPS7A-211ENST00000540408 PPIP5K2O43314 1243 aa16.41■□□□□ 0.22
COPS7A-211ENST00000540408 NTSR2O95665 410 aa16.41■□□□□ 0.22
COPS7A-211ENST00000540408 EIF2S2P20042 333 aaKnown RBP16.41■□□□□ 0.22
COPS7A-211ENST00000540408 SUPT20HQ8NEM7 779 aa16.41■□□□□ 0.22
COPS7A-211ENST00000540408 UTP14AQ9BVJ6 771 aaKnown RBP16.41■□□□□ 0.22
COPS7A-211ENST00000540408 SNED1Q8TER0 1413 aa16.4■□□□□ 0.22
COPS7A-211ENST00000540408 EPS15P42566 896 aa16.4■□□□□ 0.22
COPS7A-211ENST00000540408 ECE1P42892 770 aa16.4■□□□□ 0.22
COPS7A-211ENST00000540408 LBX1P52954 281 aa16.4■□□□□ 0.22
COPS7A-211ENST00000540408 PAXIP1Q6ZW49 1069 aaPredicted RBP16.4■□□□□ 0.22
COPS7A-211ENST00000540408 BEGAINQ9BUH8 593 aa16.4■□□□□ 0.22
COPS7A-211ENST00000540408 ATP6V0A2Q9Y487 856 aa16.4■□□□□ 0.22
COPS7A-211ENST00000540408 KDM3BQ7LBC6 1761 aa16.39■□□□□ 0.21
COPS7A-211ENST00000540408 SCNN1DP51172 638 aa16.39■□□□□ 0.21
COPS7A-211ENST00000540408 RIPK4P57078 832 aa16.39■□□□□ 0.21
COPS7A-211ENST00000540408 HSP90AB3PQ58FF7 597 aa16.39■□□□□ 0.21
COPS7A-211ENST00000540408 SLC10A5Q5PT55 438 aa16.39■□□□□ 0.21
COPS7A-211ENST00000540408 BABAM1Q9NWV8 329 aa16.39■□□□□ 0.21
COPS7A-211ENST00000540408 DLG5Q8TDM6 1919 aa16.39■□□□□ 0.21
COPS7A-211ENST00000540408 ADAMTSL1Q8N6G6 1762 aa16.38■□□□□ 0.21
COPS7A-211ENST00000540408 BBOX1O75936 387 aa16.38■□□□□ 0.21
COPS7A-211ENST00000540408 LMOD3Q0VAK6 560 aa16.38■□□□□ 0.21
COPS7A-211ENST00000540408 AOC3Q16853 763 aa16.38■□□□□ 0.21
COPS7A-211ENST00000540408 ADARB2Q9NS39 739 aaKnown RBP16.38■□□□□ 0.21
COPS7A-211ENST00000540408 ZNRF3Q9ULT6 936 aa16.38■□□□□ 0.21
COPS7A-211ENST00000540408 DPP8Q6V1X1 898 aaPredicted RBP16.37■□□□□ 0.21
COPS7A-211ENST00000540408 C3orf67Q6ZVT6 689 aa16.36■□□□□ 0.21
COPS7A-211ENST00000540408 DDX46Q7L014 1031 aaKnown RBP16.36■□□□□ 0.21
COPS7A-211ENST00000540408 SP8Q8IXZ3 490 aa16.36■□□□□ 0.21
COPS7A-211ENST00000540408 MPNDQ8N594 471 aa16.36■□□□□ 0.21
COPS7A-211ENST00000540408 GPRC5DQ9NZD1 345 aa16.36■□□□□ 0.21
COPS7A-211ENST00000540408 HSPA8P11142 646 aaKnown RBP16.35■□□□□ 0.21
COPS7A-211ENST00000540408 AIMP1Q12904 312 aaKnown RBP16.35■□□□□ 0.21
COPS7A-211ENST00000540408 GRM1Q13255 1194 aa16.35■□□□□ 0.21
COPS7A-211ENST00000540408 PDIA6Q15084 440 aa16.35■□□□□ 0.21
COPS7A-211ENST00000540408 COPS6Q7L5N1 327 aa16.35■□□□□ 0.21
COPS7A-211ENST00000540408 CAPNS2Q96L46 248 aa16.35■□□□□ 0.21
COPS7A-211ENST00000540408 GPR101Q96P66 508 aaPredicted RBP16.35■□□□□ 0.21
COPS7A-211ENST00000540408 RTFDC1Q9BY42 306 aaPredicted RBP16.35■□□□□ 0.21
COPS7A-211ENST00000540408 TRMT112Q9UI30 125 aaKnown RBP16.35■□□□□ 0.21
COPS7A-211ENST00000540408 ABCC4O15439 1325 aa16.35■□□□□ 0.21
COPS7A-211ENST00000540408 CXCL9Q07325 125 aa16.34■□□□□ 0.21
COPS7A-211ENST00000540408 TNIP1Q15025 636 aa16.34■□□□□ 0.21
COPS7A-211ENST00000540408 CIAPIN1Q6FI81 312 aa16.34■□□□□ 0.21
COPS7A-211ENST00000540408 LRP10Q7Z4F1 713 aa16.34■□□□□ 0.21
COPS7A-211ENST00000540408 BCL2L13Q9BXK5 485 aa16.34■□□□□ 0.21
COPS7A-211ENST00000540408 COL4A5P29400 1685 aa16.34■□□□□ 0.21
COPS7A-211ENST00000540408 TRAF5O00463 557 aa16.33■□□□□ 0.2
COPS7A-211ENST00000540408 ANXA1P04083 346 aa16.33■□□□□ 0.2
COPS7A-211ENST00000540408 HCLS1P14317 486 aaPredicted RBP16.33■□□□□ 0.2
COPS7A-211ENST00000540408 RALBP1Q15311 655 aa16.33■□□□□ 0.2
COPS7A-211ENST00000540408 CYP4F22Q6NT55 531 aa16.33■□□□□ 0.2
COPS7A-211ENST00000540408 NLRP10Q86W26 655 aa16.33■□□□□ 0.2
COPS7A-211ENST00000540408 XAGE3Q8WTP9 111 aa16.33■□□□□ 0.2
COPS7A-211ENST00000540408 NECTIN2Q92692 538 aa16.33■□□□□ 0.2
COPS7A-211ENST00000540408 TLL2Q9Y6L7 1015 aa16.33■□□□□ 0.2
COPS7A-211ENST00000540408 TMPOP42166 694 aaKnown RBP16.32■□□□□ 0.2
COPS7A-211ENST00000540408 GMPSP49915 693 aaPredicted RBP16.32■□□□□ 0.2
COPS7A-211ENST00000540408 FMR1Q06787 632 aaKnown RBP eCLIP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms