RNA–Protein interactions for RNA: ENST00000540103.1

NPIPB4-212, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 631 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-212ENST00000540103 IBTKQ9P2D0 1353 aaPredicted RBP10.48□□□□□ -0.73
NPIPB4-212ENST00000540103 RIC1Q4ADV7 1423 aa10.48□□□□□ -0.73
NPIPB4-212ENST00000540103 TIAM2Q8IVF5 1701 aa10.47□□□□□ -0.73
NPIPB4-212ENST00000540103 DDNO94850 711 aaPredicted RBP10.47□□□□□ -0.73
NPIPB4-212ENST00000540103 HTRA3P83110 453 aa10.47□□□□□ -0.73
NPIPB4-212ENST00000540103 FKBP4Q02790 459 aaKnown RBP eCLIP10.47□□□□□ -0.73
NPIPB4-212ENST00000540103 CCDC93Q567U6 631 aa10.47□□□□□ -0.73
NPIPB4-212ENST00000540103 DPY19L2Q6NUT2 758 aa10.47□□□□□ -0.73
NPIPB4-212ENST00000540103 KIF6Q6ZMV9 814 aa10.47□□□□□ -0.73
NPIPB4-212ENST00000540103 COPS6Q7L5N1 327 aa10.47□□□□□ -0.73
NPIPB4-212ENST00000540103 SLC51AQ86UW1 340 aa10.47□□□□□ -0.73
NPIPB4-212ENST00000540103 DDX21Q9NR30 783 aaKnown RBP eCLIP10.47□□□□□ -0.73
NPIPB4-212ENST00000540103 CCDC184Q52MB2 194 aa10.46□□□□□ -0.73
NPIPB4-212ENST00000540103 C16orf71Q8IYS4 520 aaPredicted RBP10.46□□□□□ -0.73
NPIPB4-212ENST00000540103 RTKN2Q8IZC4 609 aa10.46□□□□□ -0.73
NPIPB4-212ENST00000540103 SYNE4Q8N205 404 aa10.46□□□□□ -0.73
NPIPB4-212ENST00000540103 SMC1BQ8NDV3 1235 aa10.46□□□□□ -0.73
NPIPB4-212ENST00000540103 XAGE3Q8WTP9 111 aa10.46□□□□□ -0.73
NPIPB4-212ENST00000540103 CFAP44Q96MT7 982 aa10.46□□□□□ -0.73
NPIPB4-212ENST00000540103 CRAMP1Q96RY5 1269 aa10.46□□□□□ -0.73
NPIPB4-212ENST00000540103 ZNF277Q9NRM2 450 aaPredicted RBP10.46□□□□□ -0.73
NPIPB4-212ENST00000540103 FZD9O00144 591 aa10.45□□□□□ -0.74
NPIPB4-212ENST00000540103 GTF2E1P29083 439 aaPredicted RBP10.45□□□□□ -0.74
NPIPB4-212ENST00000540103 TCIRG1Q13488 830 aa10.45□□□□□ -0.74
NPIPB4-212ENST00000540103 PARP10Q53GL7 1025 aa10.45□□□□□ -0.74
NPIPB4-212ENST00000540103 NECTIN2Q92692 538 aa10.45□□□□□ -0.74
NPIPB4-212ENST00000540103 L3MBTL3Q96JM7 780 aaPredicted RBP10.45□□□□□ -0.74
NPIPB4-212ENST00000540103 APAF1O14727 1248 aa10.44□□□□□ -0.74
NPIPB4-212ENST00000540103 HOXB7P09629 217 aa10.44□□□□□ -0.74
NPIPB4-212ENST00000540103 POTEIP0CG38 1075 aa10.44□□□□□ -0.74
NPIPB4-212ENST00000540103 POTEJP0CG39 1038 aa10.44□□□□□ -0.74
NPIPB4-212ENST00000540103 WDR43Q15061 677 aaKnown RBP eCLIP10.44□□□□□ -0.74
NPIPB4-212ENST00000540103 CC2D2BQ6DHV5 1058 aa10.44□□□□□ -0.74
NPIPB4-212ENST00000540103 PPP1R42Q7Z4L9 355 aa10.44□□□□□ -0.74
NPIPB4-212ENST00000540103 NLRP10Q86W26 655 aa10.44□□□□□ -0.74
NPIPB4-212ENST00000540103 JMYQ8N9B5 988 aa10.44□□□□□ -0.74
NPIPB4-212ENST00000540103 KLRG1Q96E93 195 aa10.44□□□□□ -0.74
NPIPB4-212ENST00000540103 PSMD1Q99460 953 aa10.44□□□□□ -0.74
NPIPB4-212ENST00000540103 UTP14AQ9BVJ6 771 aaKnown RBP10.44□□□□□ -0.74
NPIPB4-212ENST00000540103 COL4A5P29400 1685 aa10.44□□□□□ -0.74
NPIPB4-212ENST00000540103 ZNF541Q9H0D2 1346 aa10.43□□□□□ -0.74
NPIPB4-212ENST00000540103 IARSP41252 1262 aaKnown RBP10.43□□□□□ -0.74
NPIPB4-212ENST00000540103 AIMP1Q12904 312 aaKnown RBP10.43□□□□□ -0.74
NPIPB4-212ENST00000540103 MIER1Q8N108 512 aa10.43□□□□□ -0.74
NPIPB4-212ENST00000540103 ISCA1Q9BUE6 129 aa10.43□□□□□ -0.74
NPIPB4-212ENST00000540103 MBIPQ9NS73 344 aa10.43□□□□□ -0.74
NPIPB4-212ENST00000540103 CHPF2Q9P2E5 772 aa10.43□□□□□ -0.74
NPIPB4-212ENST00000540103 LAS1LQ9Y4W2 734 aaKnown RBP10.43□□□□□ -0.74
NPIPB4-212ENST00000540103 HSP90AB3PQ58FF7 597 aa10.42□□□□□ -0.74
NPIPB4-212ENST00000540103 DUSP27Q5VZP5 1158 aa10.42□□□□□ -0.74
NPIPB4-212ENST00000540103 PLBD2Q8NHP8 589 aa10.42□□□□□ -0.74
NPIPB4-212ENST00000540103 RBM17Q96I25 401 aaKnown RBP10.42□□□□□ -0.74
NPIPB4-212ENST00000540103 NLRP3Q96P20 1036 aa10.42□□□□□ -0.74
NPIPB4-212ENST00000540103 TAF1DQ9H5J8 278 aaPredicted RBP10.42□□□□□ -0.74
NPIPB4-212ENST00000540103 SCN4AP35499 1836 aa10.42□□□□□ -0.74
NPIPB4-212ENST00000540103 ANKRD36CQ5JPF3 1778 aa10.42□□□□□ -0.74
NPIPB4-212ENST00000540103 RNF123Q5XPI4 1314 aa10.41□□□□□ -0.74
NPIPB4-212ENST00000540103 ITGBL1O95965 494 aaPredicted RBP10.41□□□□□ -0.74
NPIPB4-212ENST00000540103 HCLS1P14317 486 aaPredicted RBP10.41□□□□□ -0.74
NPIPB4-212ENST00000540103 TRIM28Q13263 835 aaKnown RBP10.41□□□□□ -0.74
NPIPB4-212ENST00000540103 GRIPAP1Q4V328 841 aa10.41□□□□□ -0.74
NPIPB4-212ENST00000540103 ANKRD13DQ6ZTN6 518 aa10.41□□□□□ -0.74
NPIPB4-212ENST00000540103 RPGRQ92834 1020 aaKnown RBP10.41□□□□□ -0.74
NPIPB4-212ENST00000540103 RTFDC1Q9BY42 306 aaPredicted RBP10.41□□□□□ -0.74
NPIPB4-212ENST00000540103 IFT57Q9NWB7 429 aa10.41□□□□□ -0.74
NPIPB4-212ENST00000540103 DBF4Q9UBU7 674 aaPredicted RBP10.41□□□□□ -0.74
NPIPB4-212ENST00000540103 ATP6V0A2Q9Y487 856 aa10.41□□□□□ -0.74
NPIPB4-212ENST00000540103 LAMB2P55268 1798 aa10.41□□□□□ -0.74
NPIPB4-212ENST00000540103 TAF1P21675 1872 aa10.4□□□□□ -0.74
NPIPB4-212ENST00000540103 ABCC4O15439 1325 aa10.4□□□□□ -0.74
NPIPB4-212ENST00000540103 CCER2I3L3R5 266 aa10.4□□□□□ -0.74
NPIPB4-212ENST00000540103 HDGFL1Q5TGJ6 251 aa10.4□□□□□ -0.74
NPIPB4-212ENST00000540103 CHADLQ6NUI6 762 aa10.4□□□□□ -0.74
NPIPB4-212ENST00000540103 SP8Q8IXZ3 490 aa10.4□□□□□ -0.74
NPIPB4-212ENST00000540103 C8orf58Q8NAV2 365 aa10.4□□□□□ -0.74
NPIPB4-212ENST00000540103 PASKQ96RG2 1323 aa10.39□□□□□ -0.75
NPIPB4-212ENST00000540103 PPEF1O14829 653 aaPredicted RBP10.39□□□□□ -0.75
NPIPB4-212ENST00000540103 BBOX1O75936 387 aa10.39□□□□□ -0.75
NPIPB4-212ENST00000540103 IFFO2Q5TF58 517 aa10.39□□□□□ -0.75
NPIPB4-212ENST00000540103 HYPKQ9NX55 129 aa10.39□□□□□ -0.75
NPIPB4-212ENST00000540103 TRMT112Q9UI30 125 aaKnown RBP10.39□□□□□ -0.75
NPIPB4-212ENST00000540103 ADAMTSL1Q8N6G6 1762 aa10.39□□□□□ -0.75
NPIPB4-212ENST00000540103 SH3TC1Q8TE82 1336 aa10.38□□□□□ -0.75
NPIPB4-212ENST00000540103 IQCA1LA6NCM1 817 aa10.38□□□□□ -0.75
NPIPB4-212ENST00000540103 ATP5J2-PTCD1G3V325 749 aa10.38□□□□□ -0.75
NPIPB4-212ENST00000540103 TCERG1O14776 1098 aaKnown RBP10.38□□□□□ -0.75
NPIPB4-212ENST00000540103 GNAI1P63096 354 aa10.38□□□□□ -0.75
NPIPB4-212ENST00000540103 SF3B3Q15393 1217 aaKnown RBP10.38□□□□□ -0.75
NPIPB4-212ENST00000540103 LDHDQ86WU2 507 aa10.38□□□□□ -0.75
NPIPB4-212ENST00000540103 GPC2Q8N158 579 aa10.38□□□□□ -0.75
NPIPB4-212ENST00000540103 TSPYL6Q8N831 410 aa10.38□□□□□ -0.75
NPIPB4-212ENST00000540103 VPS33BQ9H267 617 aa10.38□□□□□ -0.75
NPIPB4-212ENST00000540103 PHAXQ9H814 394 aaKnown RBP10.38□□□□□ -0.75
NPIPB4-212ENST00000540103 LTBP1Q14766 1721 aa10.38□□□□□ -0.75
NPIPB4-212ENST00000540103 ELL2O00472 640 aaPredicted RBP10.37□□□□□ -0.75
NPIPB4-212ENST00000540103 EPHX2P34913 555 aa10.37□□□□□ -0.75
NPIPB4-212ENST00000540103 SCNN1DP51172 638 aa10.37□□□□□ -0.75
NPIPB4-212ENST00000540103 GRAPQ13588 217 aa10.37□□□□□ -0.75
NPIPB4-212ENST00000540103 CCDC27Q2M243 656 aa10.37□□□□□ -0.75
NPIPB4-212ENST00000540103 DDX60Q8IY21 1712 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms