RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 AKT1S1Q96B36 256 aa11.29□□□□□ -0.6
DDB1-211ENST00000538280 SLC52A2Q9HAB3 445 aa11.29□□□□□ -0.6
DDB1-211ENST00000538280 DDX21Q9NR30 783 aaKnown RBP eCLIP11.29□□□□□ -0.6
DDB1-211ENST00000538280 NLRP2Q9NX02 1062 aa11.29□□□□□ -0.6
DDB1-211ENST00000538280 HDAC5Q9UQL6 1122 aa11.29□□□□□ -0.6
DDB1-211ENST00000538280 PNPLA7Q6ZV29 1317 aa11.29□□□□□ -0.6
DDB1-211ENST00000538280 ARFGEF2Q9Y6D5 1785 aa11.28□□□□□ -0.6
DDB1-211ENST00000538280 SRGAP3O43295 1099 aa11.28□□□□□ -0.6
DDB1-211ENST00000538280 SURF6O75683 361 aaKnown RBP11.28□□□□□ -0.6
DDB1-211ENST00000538280 ANXA1P04083 346 aa11.28□□□□□ -0.6
DDB1-211ENST00000538280 TATP17735 454 aaPredicted RBP11.28□□□□□ -0.6
DDB1-211ENST00000538280 C1QTNF8P60827 252 aa11.28□□□□□ -0.6
DDB1-211ENST00000538280 NUCB2P80303 420 aa11.28□□□□□ -0.6
DDB1-211ENST00000538280 TSHZ3Q63HK5 1081 aa11.28□□□□□ -0.6
DDB1-211ENST00000538280 NLGN2Q8NFZ4 835 aa11.28□□□□□ -0.6
DDB1-211ENST00000538280 LINS1Q8NG48 757 aa11.28□□□□□ -0.6
DDB1-211ENST00000538280 CWC22Q9HCG8 908 aaKnown RBP11.28□□□□□ -0.6
DDB1-211ENST00000538280 ISY1Q9ULR0 285 aaKnown RBP11.28□□□□□ -0.6
DDB1-211ENST00000538280 MAP3K2Q9Y2U5 619 aa11.28□□□□□ -0.6
DDB1-211ENST00000538280 TOGARAM1Q9Y4F4 1720 aa11.28□□□□□ -0.6
DDB1-211ENST00000538280 TTC41PQ6P2S7 1318 aa11.28□□□□□ -0.6
DDB1-211ENST00000538280 TAF1LQ8IZX4 1826 aa11.28□□□□□ -0.6
DDB1-211ENST00000538280 COL15A1P39059 1388 aa11.28□□□□□ -0.6
DDB1-211ENST00000538280 CEP350Q5VT06 3117 aa11.27□□□□□ -0.6
DDB1-211ENST00000538280 PRAMEF22A3QJZ6 481 aa11.27□□□□□ -0.61
DDB1-211ENST00000538280 IL2RBP14784 551 aa11.27□□□□□ -0.61
DDB1-211ENST00000538280 SSFA2P28290 1259 aa11.27□□□□□ -0.61
DDB1-211ENST00000538280 MCM2P49736 904 aa11.27□□□□□ -0.61
DDB1-211ENST00000538280 CUL4AQ13619 759 aa11.27□□□□□ -0.61
DDB1-211ENST00000538280 SKOR2Q2VWA4 1001 aaPredicted RBP11.27□□□□□ -0.61
DDB1-211ENST00000538280 LRP10Q7Z4F1 713 aa11.27□□□□□ -0.61
DDB1-211ENST00000538280 KLHL34Q8N239 644 aa11.27□□□□□ -0.61
DDB1-211ENST00000538280 RAPGEF4Q8WZA2 1011 aa11.27□□□□□ -0.61
DDB1-211ENST00000538280 BRPF3Q9ULD4 1205 aa11.27□□□□□ -0.61
DDB1-211ENST00000538280 SPG7Q9UQ90 795 aa11.27□□□□□ -0.61
DDB1-211ENST00000538280 DDX58O95786 925 aaKnown RBP11.26□□□□□ -0.61
DDB1-211ENST00000538280 HSP90AA1P07900 732 aaKnown RBP11.26□□□□□ -0.61
DDB1-211ENST00000538280 MCCP23508 829 aa11.26□□□□□ -0.61
DDB1-211ENST00000538280 ZNF790Q6PG37 636 aa11.26□□□□□ -0.61
DDB1-211ENST00000538280 NUTM1Q86Y26 1132 aa11.26□□□□□ -0.61
DDB1-211ENST00000538280 IFNL2Q8IZJ0 200 aa11.26□□□□□ -0.61
DDB1-211ENST00000538280 IL1RAPL2Q9NP60 686 aa11.26□□□□□ -0.61
DDB1-211ENST00000538280 AFDNP55196 1824 aaKnown RBP11.25□□□□□ -0.61
DDB1-211ENST00000538280 TRIM6-TRIM34B2RNG4 842 aa11.25□□□□□ -0.61
DDB1-211ENST00000538280 GRM8O00222 908 aa11.25□□□□□ -0.61
DDB1-211ENST00000538280 SGSM2O43147 1006 aa11.25□□□□□ -0.61
DDB1-211ENST00000538280 BAG4O95429 457 aaKnown RBP11.25□□□□□ -0.61
DDB1-211ENST00000538280 HSPA4P34932 840 aa11.25□□□□□ -0.61
DDB1-211ENST00000538280 ERC1Q8IUD2 1116 aa11.25□□□□□ -0.61
DDB1-211ENST00000538280 RILPL2Q969X0 211 aa11.25□□□□□ -0.61
DDB1-211ENST00000538280 KAZALD1Q96I82 304 aa11.25□□□□□ -0.61
DDB1-211ENST00000538280 FOXD4L1Q9NU39 408 aa11.25□□□□□ -0.61
DDB1-211ENST00000538280 PALD1Q9ULE6 856 aa11.25□□□□□ -0.61
DDB1-211ENST00000538280 RAD50Q92878 1312 aa11.25□□□□□ -0.61
DDB1-211ENST00000538280 GOLGA6L3A6NEY3 463 aa11.24□□□□□ -0.61
DDB1-211ENST00000538280 IGKV5-2P06315 115 aa11.24□□□□□ -0.61
DDB1-211ENST00000538280 SUCLG2Q96I99 432 aa11.24□□□□□ -0.61
DDB1-211ENST00000538280 DCAF5Q96JK2 942 aa11.24□□□□□ -0.61
DDB1-211ENST00000538280 IL25Q9H293 177 aa11.24□□□□□ -0.61
DDB1-211ENST00000538280 TJP1Q07157 1748 aa11.23□□□□□ -0.61
DDB1-211ENST00000538280 CYP27B1O15528 508 aa11.23□□□□□ -0.61
DDB1-211ENST00000538280 GLRX3O76003 335 aaKnown RBP11.23□□□□□ -0.61
DDB1-211ENST00000538280 YBX3P16989 372 aaKnown RBP eCLIP11.23□□□□□ -0.617e-15■□□□□ 10
DDB1-211ENST00000538280 GPR162Q16538 588 aa11.23□□□□□ -0.61
DDB1-211ENST00000538280 CWF19L2Q2TBE0 894 aaKnown RBP11.23□□□□□ -0.61
DDB1-211ENST00000538280 CNTROBQ8N137 903 aa11.23□□□□□ -0.61
DDB1-211ENST00000538280 INTS4Q96HW7 963 aaKnown RBP11.23□□□□□ -0.61
DDB1-211ENST00000538280 LSG1Q9H089 658 aaKnown RBP11.23□□□□□ -0.61
DDB1-211ENST00000538280 ANO2Q9NQ90 1003 aa11.23□□□□□ -0.61
DDB1-211ENST00000538280 C9orf78Q9NZ63 289 aaPredicted RBP11.23□□□□□ -0.61
DDB1-211ENST00000538280 KCPQ6ZWJ8 1503 aa11.23□□□□□ -0.61
DDB1-211ENST00000538280 ITGB4P16144 1822 aa11.23□□□□□ -0.61
DDB1-211ENST00000538280 SLC39A6Q13433 755 aa11.22□□□□□ -0.61
DDB1-211ENST00000538280 ERBB4Q15303 1308 aa11.22□□□□□ -0.61
DDB1-211ENST00000538280 ZGPATQ8N5A5 531 aaKnown RBP11.22□□□□□ -0.61
DDB1-211ENST00000538280 DDX54Q8TDD1 881 aaKnown RBP11.22□□□□□ -0.61
DDB1-211ENST00000538280 KCNB2Q92953 911 aa11.22□□□□□ -0.61
DDB1-211ENST00000538280 TMX3Q96JJ7 454 aa11.22□□□□□ -0.61
DDB1-211ENST00000538280 METTL22Q9BUU2 404 aaPredicted RBP11.22□□□□□ -0.61
DDB1-211ENST00000538280 ECHDC1Q9NTX5 307 aa11.22□□□□□ -0.61
DDB1-211ENST00000538280 ZDHHC9Q9Y397 364 aa11.22□□□□□ -0.61
DDB1-211ENST00000538280 UBR3Q6ZT12 1888 aa11.21□□□□□ -0.61
DDB1-211ENST00000538280 NEURL1BA8MQ27 555 aa11.21□□□□□ -0.61
DDB1-211ENST00000538280 GOLGA6L22H0YM25 854 aa11.21□□□□□ -0.61
DDB1-211ENST00000538280 SASH1O94885 1247 aa11.21□□□□□ -0.61
DDB1-211ENST00000538280 XRCC6P12956 609 aaKnown RBP eCLIP11.21□□□□□ -0.61
DDB1-211ENST00000538280 MRE11P49959 708 aa11.21□□□□□ -0.61
DDB1-211ENST00000538280 NEK4P51957 841 aa11.21□□□□□ -0.61
DDB1-211ENST00000538280 KLHL40Q2TBA0 621 aa11.21□□□□□ -0.61
DDB1-211ENST00000538280 CLASRPQ8N2M8 674 aaKnown RBP11.21□□□□□ -0.61
DDB1-211ENST00000538280 NFATC2IPQ8NCF5 419 aa11.21□□□□□ -0.61
DDB1-211ENST00000538280 ZNF496Q96IT1 587 aaPredicted RBP11.21□□□□□ -0.61
DDB1-211ENST00000538280 BICC1Q9H694 974 aaKnown RBP11.21□□□□□ -0.61
DDB1-211ENST00000538280 SNRKQ9NRH2 765 aa11.21□□□□□ -0.61
DDB1-211ENST00000538280 SNRPA1P09661 255 aaKnown RBP11.2□□□□□ -0.62
DDB1-211ENST00000538280 PRIM1P49642 420 aaKnown RBP11.2□□□□□ -0.62
DDB1-211ENST00000538280 GCKRQ14397 625 aa11.2□□□□□ -0.62
DDB1-211ENST00000538280 MSL1Q68DK7 614 aa11.2□□□□□ -0.62
DDB1-211ENST00000538280 XAGE3Q8WTP9 111 aa11.2□□□□□ -0.62
DDB1-211ENST00000538280 SYTL4Q96C24 671 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms