RNA–Protein interactions for RNA: ENST00000537320.5

TNC-211, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 4,946 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-211ENST00000537320 GDPD2Q9HCC8 539 aa13.31□□□□□ -0.28
TNC-211ENST00000537320 NIP7Q9Y221 180 aaKnown RBP eCLIP13.31□□□□□ -0.28
TNC-211ENST00000537320 CFAP74Q9C0B2 1584 aa13.31□□□□□ -0.28
TNC-211ENST00000537320 ZNF790Q6PG37 636 aa13.31□□□□□ -0.28
TNC-211ENST00000537320 DZIP3Q86Y13 1208 aaKnown RBP13.31□□□□□ -0.28
TNC-211ENST00000537320 SMARCE1Q969G3 411 aa13.31□□□□□ -0.28
TNC-211ENST00000537320 SSBP05455 408 aaKnown RBP eCLIP13.31□□□□□ -0.28
TNC-211ENST00000537320 STX6O43752 255 aa13.3□□□□□ -0.28
TNC-211ENST00000537320 PPFIA3O75145 1194 aa13.3□□□□□ -0.28
TNC-211ENST00000537320 DDX17Q92841 729 aaKnown RBP13.3□□□□□ -0.28
TNC-211ENST00000537320 TMX3Q96JJ7 454 aa13.3□□□□□ -0.28
TNC-211ENST00000537320 SBNO2Q9Y2G9 1366 aa13.3□□□□□ -0.28
TNC-211ENST00000537320 CEP131Q9UPN4 1083 aa13.3□□□□□ -0.28
TNC-211ENST00000537320 UGGT1Q9NYU2 1555 aa13.3□□□□□ -0.28
TNC-211ENST00000537320 ANKRD18AQ8IVF6 992 aa13.3□□□□□ -0.28
TNC-211ENST00000537320 PLEKHM2Q8IWE5 1019 aa13.3□□□□□ -0.28
TNC-211ENST00000537320 TCEANC2Q96MN5 208 aa13.3□□□□□ -0.28
TNC-211ENST00000537320 SETDB2Q96T68 719 aa13.3□□□□□ -0.28
TNC-211ENST00000537320 IQSEC3Q9UPP2 1182 aaPredicted RBP13.3□□□□□ -0.28
TNC-211ENST00000537320 RBM8AQ9Y5S9 174 aaKnown RBP13.3□□□□□ -0.28
TNC-211ENST00000537320 USP16Q9Y5T5 823 aa13.3□□□□□ -0.28
TNC-211ENST00000537320 RAB11FIP4Q86YS3 637 aa13.29□□□□□ -0.28
TNC-211ENST00000537320 CHD1O14646 1710 aa13.29□□□□□ -0.28
TNC-211ENST00000537320 TMEM67Q5HYA8 995 aa13.29□□□□□ -0.28
TNC-211ENST00000537320 NCOA7Q8NI08 942 aa13.29□□□□□ -0.28
TNC-211ENST00000537320 BABAM1Q9NWV8 329 aa13.29□□□□□ -0.28
TNC-211ENST00000537320 TFIP11Q9UBB9 837 aaKnown RBP13.29□□□□□ -0.28
TNC-211ENST00000537320 SEC63Q9UGP8 760 aaKnown RBP13.29□□□□□ -0.28
TNC-211ENST00000537320 BLMP54132 1417 aaPredicted RBP13.29□□□□□ -0.28
TNC-211ENST00000537320 CT47A1Q5JQC4 288 aaPredicted RBP13.29□□□□□ -0.28
TNC-211ENST00000537320 CCDC144CPQ8IYA2 1237 aa13.29□□□□□ -0.28
TNC-211ENST00000537320 PLXNC1O60486 1568 aa13.29□□□□□ -0.28
TNC-211ENST00000537320 MICU3Q86XE3 530 aa13.29□□□□□ -0.28
TNC-211ENST00000537320 BRF1Q92994 677 aa13.29□□□□□ -0.28
TNC-211ENST00000537320 BICC1Q9H694 974 aaKnown RBP13.29□□□□□ -0.28
TNC-211ENST00000537320 ARGLU1Q9NWB6 273 aaPredicted RBP13.29□□□□□ -0.28
TNC-211ENST00000537320 MLH3Q9UHC1 1453 aa13.28□□□□□ -0.28
TNC-211ENST00000537320 ZFYP08048 801 aaPredicted RBP13.28□□□□□ -0.28
TNC-211ENST00000537320 SSRP1Q08945 709 aaKnown RBP13.28□□□□□ -0.28
TNC-211ENST00000537320 MFSD6Q6ZSS7 791 aa13.28□□□□□ -0.28
TNC-211ENST00000537320 SLF2Q8IX21 1173 aa13.28□□□□□ -0.28
TNC-211ENST00000537320 NLRP3Q96P20 1036 aa13.28□□□□□ -0.28
TNC-211ENST00000537320 UTP14AQ9BVJ6 771 aaKnown RBP13.28□□□□□ -0.28
TNC-211ENST00000537320 TTC41PQ6P2S7 1318 aa13.28□□□□□ -0.28
TNC-211ENST00000537320 PREX2Q70Z35 1606 aa13.28□□□□□ -0.28
TNC-211ENST00000537320 MAGI2Q86UL8 1455 aa13.28□□□□□ -0.28
TNC-211ENST00000537320 LDHCP07864 332 aa13.28□□□□□ -0.28
TNC-211ENST00000537320 CCDC183Q5T5S1 534 aa13.28□□□□□ -0.28
TNC-211ENST00000537320 CATIPQ7Z7H3 387 aa13.28□□□□□ -0.28
TNC-211ENST00000537320 PPFIBP1Q86W92 1011 aa13.28□□□□□ -0.28
TNC-211ENST00000537320 NECAB1Q8N987 351 aa13.28□□□□□ -0.28
TNC-211ENST00000537320 BAG4O95429 457 aaKnown RBP13.28□□□□□ -0.28
TNC-211ENST00000537320 MCMDC2Q4G0Z9 681 aa13.28□□□□□ -0.28
TNC-211ENST00000537320 FILIP1Q7Z7B0 1213 aa13.28□□□□□ -0.28
TNC-211ENST00000537320 METP08581 1390 aa13.28□□□□□ -0.28
TNC-211ENST00000537320 ZCCHC11Q5TAX3 1644 aaKnown RBP13.27□□□□□ -0.28
TNC-211ENST00000537320 ZNF76P36508 570 aa13.27□□□□□ -0.28
TNC-211ENST00000537320 VSIG10Q8N0Z9 540 aa13.27□□□□□ -0.28
TNC-211ENST00000537320 LRRC2Q9BYS8 371 aa13.27□□□□□ -0.28
TNC-211ENST00000537320 BMP2KQ9NSY1 1161 aaPredicted RBP13.27□□□□□ -0.28
TNC-211ENST00000537320 IARSP41252 1262 aaKnown RBP13.27□□□□□ -0.29
TNC-211ENST00000537320 ANAPC15P60006 121 aa13.27□□□□□ -0.29
TNC-211ENST00000537320 NMIQ13287 307 aaPredicted RBP13.27□□□□□ -0.29
TNC-211ENST00000537320 ACBD3Q9H3P7 528 aa13.27□□□□□ -0.29
TNC-211ENST00000537320 ORC3Q9UBD5 711 aaPredicted RBP13.27□□□□□ -0.29
TNC-211ENST00000537320 LMTK3Q96Q04 1460 aa13.27□□□□□ -0.29
TNC-211ENST00000537320 KDM5AP29375 1690 aaKnown RBP13.27□□□□□ -0.29
TNC-211ENST00000537320 KDM5DQ9BY66 1539 aa13.27□□□□□ -0.29
TNC-211ENST00000537320 IRS4O14654 1257 aaPredicted RBP13.27□□□□□ -0.29
TNC-211ENST00000537320 TFCP2Q12800 502 aa13.27□□□□□ -0.29
TNC-211ENST00000537320 INSRP06213 1382 aa13.27□□□□□ -0.29
TNC-211ENST00000537320 SLC4A8Q2Y0W8 1093 aa13.27□□□□□ -0.29
TNC-211ENST00000537320 BAG3O95817 575 aa13.26□□□□□ -0.29
TNC-211ENST00000537320 HOXB7P09629 217 aa13.26□□□□□ -0.29
TNC-211ENST00000537320 PAG1Q9NWQ8 432 aa13.26□□□□□ -0.29
TNC-211ENST00000537320 CBFA2T2O43439 604 aa13.26□□□□□ -0.29
TNC-211ENST00000537320 MCM5P33992 734 aa13.26□□□□□ -0.29
TNC-211ENST00000537320 SLC9C2Q5TAH2 1124 aa13.26□□□□□ -0.29
TNC-211ENST00000537320 ZNHIT6Q9NWK9 470 aaKnown RBP13.26□□□□□ -0.29
TNC-211ENST00000537320 TSPY2A6NKD2 308 aa13.26□□□□□ -0.29
TNC-211ENST00000537320 CDR1P51861 262 aa13.26□□□□□ -0.29
TNC-211ENST00000537320 ST5P78524 1137 aa13.26□□□□□ -0.29
TNC-211ENST00000537320 SPTY2D1Q68D10 685 aaPredicted RBP13.26□□□□□ -0.29
TNC-211ENST00000537320 HELBQ8NG08 1087 aaPredicted RBP13.26□□□□□ -0.29
TNC-211ENST00000537320 TANGO6Q9C0B7 1094 aa13.26□□□□□ -0.29
TNC-211ENST00000537320 USP19O94966 1318 aa13.26□□□□□ -0.29
TNC-211ENST00000537320 CYP7A1P22680 504 aa13.25□□□□□ -0.29
TNC-211ENST00000537320 METAP2P50579 478 aaKnown RBP eCLIP13.25□□□□□ -0.29
TNC-211ENST00000537320 TMEM132AQ24JP5 1023 aa13.25□□□□□ -0.29
TNC-211ENST00000537320 ZNF622Q969S3 477 aaKnown RBP eCLIP13.25□□□□□ -0.29
TNC-211ENST00000537320 ERVK-7P63135 1459 aa13.25□□□□□ -0.29
TNC-211ENST00000537320 SMTNL1A8MU46 457 aa13.25□□□□□ -0.29
TNC-211ENST00000537320 SEC24BO95487 1268 aa13.25□□□□□ -0.29
TNC-211ENST00000537320 CCDC96Q2M329 555 aa13.25□□□□□ -0.29
TNC-211ENST00000537320 ERCC6L2Q5T890 1561 aa13.25□□□□□ -0.29
TNC-211ENST00000537320 CAGE1Q8TC20 777 aa13.25□□□□□ -0.29
TNC-211ENST00000537320 SLC52A2Q9HAB3 445 aa13.25□□□□□ -0.29
TNC-211ENST00000537320 PDE4BQ07343 736 aa13.25□□□□□ -0.29
TNC-211ENST00000537320 CKAP2LQ8IYA6 745 aa13.25□□□□□ -0.29
TNC-211ENST00000537320 KLF18A0A0U1RQI7 1052 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms