RNA–Protein interactions for RNA: ENST00000535796.1

CDK2AP1-202, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 2

Gene CDK2AP1, Length 344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-202ENST00000535796 MAPK8IP3Q9UPT6 1336 aa26.36■■□□□ 1.81
CDK2AP1-202ENST00000535796 CC2D2BQ6DHV5 1058 aa26.35■■□□□ 1.81
CDK2AP1-202ENST00000535796 JDP2Q8WYK2 163 aa26.35■■□□□ 1.81
CDK2AP1-202ENST00000535796 UBN2Q6ZU65 1347 aa26.35■■□□□ 1.81
CDK2AP1-202ENST00000535796 TMEM88BA6NKF7 163 aa26.34■■□□□ 1.81
CDK2AP1-202ENST00000535796 PNMA8AQ86V59 439 aaPredicted RBP26.34■■□□□ 1.81
CDK2AP1-202ENST00000535796 GPC2Q8N158 579 aa26.34■■□□□ 1.81
CDK2AP1-202ENST00000535796 ITGBL1O95965 494 aaPredicted RBP26.33■■□□□ 1.81
CDK2AP1-202ENST00000535796 PNNQ9H307 717 aaKnown RBP26.33■■□□□ 1.81
CDK2AP1-202ENST00000535796 COL4A5P29400 1685 aa26.33■■□□□ 1.81
CDK2AP1-202ENST00000535796 ERBB4Q15303 1308 aa26.32■■□□□ 1.8
CDK2AP1-202ENST00000535796 ANKRD36CQ5JPF3 1778 aa26.31■■□□□ 1.8
CDK2AP1-202ENST00000535796 HOXA10P31260 410 aaPredicted RBP26.31■■□□□ 1.8
CDK2AP1-202ENST00000535796 EIF6P56537 245 aaKnown RBP26.31■■□□□ 1.8
CDK2AP1-202ENST00000535796 SUSD4Q5VX71 490 aa26.31■■□□□ 1.8
CDK2AP1-202ENST00000535796 LTBP1Q14766 1721 aa26.31■■□□□ 1.8
CDK2AP1-202ENST00000535796 NTSR2O95665 410 aa26.29■■□□□ 1.8
CDK2AP1-202ENST00000535796 GRIPAP1Q4V328 841 aa26.29■■□□□ 1.8
CDK2AP1-202ENST00000535796 MAP1SQ66K74 1059 aaPredicted RBP26.29■■□□□ 1.8
CDK2AP1-202ENST00000535796 GIGYF2Q6Y7W6 1299 aaKnown RBP26.29■■□□□ 1.8
CDK2AP1-202ENST00000535796 ZNF34Q8IZ26 560 aa26.29■■□□□ 1.8
CDK2AP1-202ENST00000535796 RBM17Q96I25 401 aaKnown RBP26.29■■□□□ 1.8
CDK2AP1-202ENST00000535796 GJA3Q9Y6H8 435 aa26.29■■□□□ 1.8
CDK2AP1-202ENST00000535796 PPEF1O14829 653 aaPredicted RBP26.28■■□□□ 1.8
CDK2AP1-202ENST00000535796 FOXN1O15353 648 aa26.28■■□□□ 1.8
CDK2AP1-202ENST00000535796 VEGFBP49765 207 aa26.28■■□□□ 1.8
CDK2AP1-202ENST00000535796 CNTROBQ8N137 903 aa26.28■■□□□ 1.8
CDK2AP1-202ENST00000535796 TSPYL4Q9UJ04 414 aa26.28■■□□□ 1.8
CDK2AP1-202ENST00000535796 LAMB2P55268 1798 aa26.28■■□□□ 1.8
CDK2AP1-202ENST00000535796 LMOD1P29536 600 aaPredicted RBP26.27■■□□□ 1.8
CDK2AP1-202ENST00000535796 PPP1R42Q7Z4L9 355 aa26.27■■□□□ 1.8
CDK2AP1-202ENST00000535796 LARGE2Q8N3Y3 721 aa26.27■■□□□ 1.8
CDK2AP1-202ENST00000535796 AIDAQ96BJ3 306 aa26.27■■□□□ 1.8
CDK2AP1-202ENST00000535796 CRAMP1Q96RY5 1269 aa26.27■■□□□ 1.8
CDK2AP1-202ENST00000535796 PARP10Q53GL7 1025 aa26.26■■□□□ 1.79
CDK2AP1-202ENST00000535796 TCERG1O14776 1098 aaKnown RBP26.25■■□□□ 1.79
CDK2AP1-202ENST00000535796 TRPM7Q96QT4 1865 aa26.25■■□□□ 1.79
CDK2AP1-202ENST00000535796 C3orf67Q6ZVT6 689 aa26.24■■□□□ 1.79
CDK2AP1-202ENST00000535796 EIF2S2P20042 333 aaKnown RBP26.23■■□□□ 1.79
CDK2AP1-202ENST00000535796 SLC51AQ86UW1 340 aa26.23■■□□□ 1.79
CDK2AP1-202ENST00000535796 NLRP3Q96P20 1036 aa26.23■■□□□ 1.79
CDK2AP1-202ENST00000535796 TMX4Q9H1E5 349 aaPredicted RBP26.23■■□□□ 1.79
CDK2AP1-202ENST00000535796 RASSF10A6NK89 507 aa26.22■■□□□ 1.79
CDK2AP1-202ENST00000535796 CTCFP49711 727 aaPredicted RBP26.22■■□□□ 1.79
CDK2AP1-202ENST00000535796 SCNN1DP51172 638 aa26.22■■□□□ 1.79
CDK2AP1-202ENST00000535796 NIM1KQ8IY84 436 aa26.22■■□□□ 1.79
CDK2AP1-202ENST00000535796 PRDM10Q9NQV6 1147 aa26.22■■□□□ 1.79
CDK2AP1-202ENST00000535796 DEFB115Q30KQ5 88 aa26.21■■□□□ 1.79
CDK2AP1-202ENST00000535796 LRP10Q7Z4F1 713 aa26.21■■□□□ 1.79
CDK2AP1-202ENST00000535796 UTP14AQ9BVJ6 771 aaKnown RBP26.21■■□□□ 1.79
CDK2AP1-202ENST00000535796 ABT1Q9ULW3 272 aaKnown RBP26.21■■□□□ 1.79
CDK2AP1-202ENST00000535796 PPIP5K2O43314 1243 aa26.2■■□□□ 1.78
CDK2AP1-202ENST00000535796 RIPK4P57078 832 aa26.2■■□□□ 1.78
CDK2AP1-202ENST00000535796 PDIA6Q15084 440 aa26.2■■□□□ 1.78
CDK2AP1-202ENST00000535796 ANXA1P04083 346 aa26.19■■□□□ 1.78
CDK2AP1-202ENST00000535796 EPS15P42566 896 aa26.19■■□□□ 1.78
CDK2AP1-202ENST00000535796 DDX21Q9NR30 783 aaKnown RBP eCLIP26.19■■□□□ 1.78
CDK2AP1-202ENST00000535796 ATP6V0A2Q9Y487 856 aa26.19■■□□□ 1.78
CDK2AP1-202ENST00000535796 LMOD3Q0VAK6 560 aa26.18■■□□□ 1.78
CDK2AP1-202ENST00000535796 AOC3Q16853 763 aa26.18■■□□□ 1.78
CDK2AP1-202ENST00000535796 PROSER3Q2NL68 480 aa26.18■■□□□ 1.78
CDK2AP1-202ENST00000535796 BABAM1Q9NWV8 329 aa26.18■■□□□ 1.78
CDK2AP1-202ENST00000535796 WBP1LQ9NX94 342 aa26.18■■□□□ 1.78
CDK2AP1-202ENST00000535796 THSD7BQ9C0I4 1608 aa26.17■■□□□ 1.78
CDK2AP1-202ENST00000535796 ABCC4O15439 1325 aa26.17■■□□□ 1.78
CDK2AP1-202ENST00000535796 SLC10A5Q5PT55 438 aa26.17■■□□□ 1.78
CDK2AP1-202ENST00000535796 WDR33Q9C0J8 1336 aaKnown RBP26.16■■□□□ 1.78
CDK2AP1-202ENST00000535796 HSP90AB3PQ58FF7 597 aa26.16■■□□□ 1.78
CDK2AP1-202ENST00000535796 USP50Q70EL3 339 aaPredicted RBP26.16■■□□□ 1.78
CDK2AP1-202ENST00000535796 SUPT20HQ8NEM7 779 aa26.16■■□□□ 1.78
CDK2AP1-202ENST00000535796 VPS33BQ9H267 617 aa26.16■■□□□ 1.78
CDK2AP1-202ENST00000535796 TAF1P21675 1872 aa26.15■■□□□ 1.78
CDK2AP1-202ENST00000535796 TMPOP42166 694 aaKnown RBP26.14■■□□□ 1.78
CDK2AP1-202ENST00000535796 LBX1P52954 281 aa26.14■■□□□ 1.78
CDK2AP1-202ENST00000535796 NECTIN2Q92692 538 aa26.14■■□□□ 1.78
CDK2AP1-202ENST00000535796 MAP2K1Q02750 393 aaPredicted RBP26.13■■□□□ 1.77
CDK2AP1-202ENST00000535796 AIMP1Q12904 312 aaKnown RBP26.13■■□□□ 1.77
CDK2AP1-202ENST00000535796 COPS6Q7L5N1 327 aa26.13■■□□□ 1.77
CDK2AP1-202ENST00000535796 DDX60Q8IY21 1712 aaKnown RBP26.12■■□□□ 1.77
CDK2AP1-202ENST00000535796 FMR1Q06787 632 aaKnown RBP eCLIP26.12■■□□□ 1.77
CDK2AP1-202ENST00000535796 RALBP1Q15311 655 aa26.12■■□□□ 1.77
CDK2AP1-202ENST00000535796 DPP8Q6V1X1 898 aaPredicted RBP26.12■■□□□ 1.77
CDK2AP1-202ENST00000535796 PAXIP1Q6ZW49 1069 aaPredicted RBP26.12■■□□□ 1.77
CDK2AP1-202ENST00000535796 NLRP10Q86W26 655 aa26.12■■□□□ 1.77
CDK2AP1-202ENST00000535796 XAGE3Q8WTP9 111 aa26.12■■□□□ 1.77
CDK2AP1-202ENST00000535796 GPRC5DQ9NZD1 345 aa26.12■■□□□ 1.77
CDK2AP1-202ENST00000535796 ZNRF3Q9ULT6 936 aa26.12■■□□□ 1.77
CDK2AP1-202ENST00000535796 LRRC37AA6NMS7 1700 aa26.11■■□□□ 1.77
CDK2AP1-202ENST00000535796 BBOX1O75936 387 aa26.11■■□□□ 1.77
CDK2AP1-202ENST00000535796 HCLS1P14317 486 aaPredicted RBP26.11■■□□□ 1.77
CDK2AP1-202ENST00000535796 RTFDC1Q9BY42 306 aaPredicted RBP26.11■■□□□ 1.77
CDK2AP1-202ENST00000535796 ADARB2Q9NS39 739 aaKnown RBP26.11■■□□□ 1.77
CDK2AP1-202ENST00000535796 HSPA8P11142 646 aaKnown RBP26.1■■□□□ 1.77
CDK2AP1-202ENST00000535796 CXCL9Q07325 125 aa26.1■■□□□ 1.77
CDK2AP1-202ENST00000535796 SP8Q8IXZ3 490 aa26.1■■□□□ 1.77
CDK2AP1-202ENST00000535796 TRMT112Q9UI30 125 aaKnown RBP26.1■■□□□ 1.77
CDK2AP1-202ENST00000535796 SH3TC1Q8TE82 1336 aa26.1■■□□□ 1.77
CDK2AP1-202ENST00000535796 TRAF5O00463 557 aa26.09■■□□□ 1.77
CDK2AP1-202ENST00000535796 ECE1P42892 770 aa26.09■■□□□ 1.77
CDK2AP1-202ENST00000535796 TCIRG1Q13488 830 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms