RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 MROH2AA6NES4 1674 aa4.84□□□□□ -1.63
CHMP4A-208ENST00000534106 ATP7AQ04656 1500 aa4.84□□□□□ -1.63
CHMP4A-208ENST00000534106 PZPP20742 1482 aa4.84□□□□□ -1.63
CHMP4A-208ENST00000534106 CCNB3Q8WWL7 1395 aa4.84□□□□□ -1.63
CHMP4A-208ENST00000534106 A0A1B0GTH6 734 aa4.84□□□□□ -1.63
CHMP4A-208ENST00000534106 TRAK2O60296 914 aa4.84□□□□□ -1.63
CHMP4A-208ENST00000534106 ADAM23O75077 832 aa4.84□□□□□ -1.63
CHMP4A-208ENST00000534106 IDI1Q13907 227 aa4.84□□□□□ -1.63
CHMP4A-208ENST00000534106 ESCO1Q5FWF5 840 aa4.84□□□□□ -1.63
CHMP4A-208ENST00000534106 EFHC2Q5JST6 749 aa4.84□□□□□ -1.63
CHMP4A-208ENST00000534106 EDARADDQ8WWZ3 215 aa4.84□□□□□ -1.63
CHMP4A-208ENST00000534106 KLRG1Q96E93 195 aa4.84□□□□□ -1.63
CHMP4A-208ENST00000534106 RUBCNLQ9H714 662 aa4.84□□□□□ -1.63
CHMP4A-208ENST00000534106 LRRC4BQ9NT99 713 aa4.84□□□□□ -1.63
CHMP4A-208ENST00000534106 GDF2Q9UK05 429 aaPredicted RBP4.84□□□□□ -1.63
CHMP4A-208ENST00000534106 NCOA2Q15596 1464 aa4.83□□□□□ -1.64
CHMP4A-208ENST00000534106 SPATA31A6Q5VVP1 1343 aa4.83□□□□□ -1.64
CHMP4A-208ENST00000534106 IL2RAP01589 272 aa4.83□□□□□ -1.64
CHMP4A-208ENST00000534106 BMP4P12644 408 aa4.83□□□□□ -1.64
CHMP4A-208ENST00000534106 SNRPNP63162 240 aaKnown RBP4.83□□□□□ -1.64
CHMP4A-208ENST00000534106 RBM6P78332 1123 aaKnown RBP4.83□□□□□ -1.64
CHMP4A-208ENST00000534106 GRIN2CQ14957 1233 aa4.83□□□□□ -1.64
CHMP4A-208ENST00000534106 C14orf37Q86TY3 774 aa4.83□□□□□ -1.64
CHMP4A-208ENST00000534106 ITSN2Q9NZM3 1697 aa4.83□□□□□ -1.64
CHMP4A-208ENST00000534106 PLXNC1O60486 1568 aa4.82□□□□□ -1.64
CHMP4A-208ENST00000534106 SETBP1Q9Y6X0 1596 aa4.82□□□□□ -1.64
CHMP4A-208ENST00000534106 NLRP1Q9C000 1473 aa4.82□□□□□ -1.64
CHMP4A-208ENST00000534106 MBD5Q9P267 1494 aa4.82□□□□□ -1.64
CHMP4A-208ENST00000534106 RGS12O14924 1447 aa4.82□□□□□ -1.64
CHMP4A-208ENST00000534106 DEFB132Q7Z7B7 95 aa4.82□□□□□ -1.64
CHMP4A-208ENST00000534106 GOLGA6L1Q8N7Z2 621 aa4.82□□□□□ -1.64
CHMP4A-208ENST00000534106 BANK1Q8NDB2 785 aa4.82□□□□□ -1.64
CHMP4A-208ENST00000534106 CDCA7Q9BWT1 371 aaPredicted RBP4.82□□□□□ -1.64
CHMP4A-208ENST00000534106 PRM3Q9NNZ6 103 aa4.82□□□□□ -1.64
CHMP4A-208ENST00000534106 CEP126Q9P2H0 1117 aa4.82□□□□□ -1.64
CHMP4A-208ENST00000534106 SCAF11Q99590 1463 aaKnown RBP4.81□□□□□ -1.64
CHMP4A-208ENST00000534106 CASKIN1Q8WXD9 1431 aa4.81□□□□□ -1.64
CHMP4A-208ENST00000534106 SHISA8B8ZZ34 492 aa4.81□□□□□ -1.64
CHMP4A-208ENST00000534106 K7ELQ4 463 aaPredicted RBP4.81□□□□□ -1.64
CHMP4A-208ENST00000534106 PIK3R2O00459 728 aa4.81□□□□□ -1.64
CHMP4A-208ENST00000534106 MSX1P28360 303 aa4.81□□□□□ -1.64
CHMP4A-208ENST00000534106 USP4Q13107 963 aa4.81□□□□□ -1.64
CHMP4A-208ENST00000534106 LBRQ14739 615 aaKnown RBP4.81□□□□□ -1.64
CHMP4A-208ENST00000534106 SLFNL1Q499Z3 407 aa4.81□□□□□ -1.64
CHMP4A-208ENST00000534106 C4orf17Q53FE4 359 aa4.81□□□□□ -1.64
CHMP4A-208ENST00000534106 BRINP3Q76B58 766 aa4.81□□□□□ -1.64
CHMP4A-208ENST00000534106 AIDAQ96BJ3 306 aa4.81□□□□□ -1.64
CHMP4A-208ENST00000534106 XAGE2Q96GT9 111 aa4.81□□□□□ -1.64
CHMP4A-208ENST00000534106 NGLY1Q96IV0 654 aa4.81□□□□□ -1.64
CHMP4A-208ENST00000534106 RNF17Q9BXT8 1623 aaKnown RBP4.81□□□□□ -1.64
CHMP4A-208ENST00000534106 MSH6P52701 1360 aa4.8□□□□□ -1.64
CHMP4A-208ENST00000534106 TMEM2Q9UHN6 1383 aa4.8□□□□□ -1.64
CHMP4A-208ENST00000534106 IQGAP1P46940 1657 aa4.8□□□□□ -1.64
CHMP4A-208ENST00000534106 ROBO1Q9Y6N7 1651 aa4.8□□□□□ -1.64
CHMP4A-208ENST00000534106 DEPDC5O75140 1603 aa4.8□□□□□ -1.64
CHMP4A-208ENST00000534106 PREX2Q70Z35 1606 aa4.8□□□□□ -1.64
CHMP4A-208ENST00000534106 PROCP04070 461 aa4.8□□□□□ -1.64
CHMP4A-208ENST00000534106 TSPY4P0CV99 314 aa4.8□□□□□ -1.64
CHMP4A-208ENST00000534106 TSPY10P0CW01 314 aa4.8□□□□□ -1.64
CHMP4A-208ENST00000534106 FGFR3P22607 806 aa4.8□□□□□ -1.64
CHMP4A-208ENST00000534106 BAG6P46379 1132 aa4.8□□□□□ -1.64
CHMP4A-208ENST00000534106 EIF4G2P78344 907 aaKnown RBP eCLIP4.8□□□□□ -1.64
CHMP4A-208ENST00000534106 TLR1Q15399 786 aa4.8□□□□□ -1.64
CHMP4A-208ENST00000534106 OXLD1Q5BKU9 147 aa4.8□□□□□ -1.64
CHMP4A-208ENST00000534106 ALYREFQ86V81 257 aaKnown RBP4.8□□□□□ -1.64
CHMP4A-208ENST00000534106 RHBDD1Q8TEB9 315 aa4.8□□□□□ -1.64
CHMP4A-208ENST00000534106 SIRT1Q96EB6 747 aa4.8□□□□□ -1.64
CHMP4A-208ENST00000534106 ABHD17AQ96GS6 310 aa4.8□□□□□ -1.64
CHMP4A-208ENST00000534106 CCDC85AQ96PX6 553 aaPredicted RBP4.8□□□□□ -1.64
CHMP4A-208ENST00000534106 ATXN7L1Q9ULK2 861 aaPredicted RBP4.8□□□□□ -1.64
CHMP4A-208ENST00000534106 DOLKQ9UPQ8 538 aa4.8□□□□□ -1.64
CHMP4A-208ENST00000534106 RTEL1-TNFRSF6BF6WH68 1400 aa4.8□□□□□ -1.64
CHMP4A-208ENST00000534106 EP400Q96L91 3159 aa4.79□□□□□ -1.64
CHMP4A-208ENST00000534106 MAP3K1Q13233 1512 aa4.79□□□□□ -1.64
CHMP4A-208ENST00000534106 KDM5DQ9BY66 1539 aa4.79□□□□□ -1.64
CHMP4A-208ENST00000534106 KRBA1A5PL33 1030 aa4.79□□□□□ -1.64
CHMP4A-208ENST00000534106 ITGB2P05107 769 aa4.79□□□□□ -1.64
CHMP4A-208ENST00000534106 THBS1P07996 1170 aa4.79□□□□□ -1.64
CHMP4A-208ENST00000534106 ATF3P18847 181 aa4.79□□□□□ -1.64
CHMP4A-208ENST00000534106 PLA2G4AP47712 749 aa4.79□□□□□ -1.64
CHMP4A-208ENST00000534106 C1orf229Q6ZS94 237 aaPredicted RBP4.79□□□□□ -1.64
CHMP4A-208ENST00000534106 MTMR14Q8NCE2 650 aa4.79□□□□□ -1.64
CHMP4A-208ENST00000534106 C19orf44Q9H6X5 657 aa4.79□□□□□ -1.64
CHMP4A-208ENST00000534106 SNRKQ9NRH2 765 aa4.79□□□□□ -1.64
CHMP4A-208ENST00000534106 GGA1Q9UJY5 639 aa4.79□□□□□ -1.64
CHMP4A-208ENST00000534106 USP21Q9UK80 565 aa4.79□□□□□ -1.64
CHMP4A-208ENST00000534106 POLR1AO95602 1720 aaPredicted RBP4.79□□□□□ -1.64
CHMP4A-208ENST00000534106 LRRIQ1Q96JM4 1722 aa4.79□□□□□ -1.64
CHMP4A-208ENST00000534106 ERVK-7P63135 1459 aa4.79□□□□□ -1.64
CHMP4A-208ENST00000534106 PLEKHH2Q8IVE3 1493 aa4.79□□□□□ -1.64
CHMP4A-208ENST00000534106 INO80Q9ULG1 1556 aaPredicted RBP4.78□□□□□ -1.64
CHMP4A-208ENST00000534106 ARHGAP23Q9P227 1491 aa4.78□□□□□ -1.64
CHMP4A-208ENST00000534106 BNIP3LO60238 219 aa4.78□□□□□ -1.64
CHMP4A-208ENST00000534106 FURINP09958 794 aa4.78□□□□□ -1.64
CHMP4A-208ENST00000534106 CTBSQ01459 385 aa4.78□□□□□ -1.64
CHMP4A-208ENST00000534106 XP32Q5T750 250 aa4.78□□□□□ -1.64
CHMP4A-208ENST00000534106 FIGNL1Q6PIW4 674 aa4.78□□□□□ -1.64
CHMP4A-208ENST00000534106 TBC1D9Q6ZT07 1266 aa4.78□□□□□ -1.64
CHMP4A-208ENST00000534106 RNF135Q8IUD6 432 aa4.78□□□□□ -1.64
CHMP4A-208ENST00000534106 FHDC1Q9C0D6 1143 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms