RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 BRWD3Q6RI45 1802 aa6.58□□□□□ -1.36
CKAP5-212ENST00000533413 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.58□□□□□ -1.36
CKAP5-212ENST00000533413 ESPNB1AK53 854 aa6.58□□□□□ -1.36
CKAP5-212ENST00000533413 NME9Q86XW9 330 aa6.58□□□□□ -1.36
CKAP5-212ENST00000533413 BTG4Q9NY30 223 aa6.58□□□□□ -1.36
CKAP5-212ENST00000533413 MAGEC2Q9UBF1 373 aaPredicted RBP6.58□□□□□ -1.36
CKAP5-212ENST00000533413 SPATA31A5Q5VU36 1347 aa6.58□□□□□ -1.36
CKAP5-212ENST00000533413 SPATA31A7Q8IWB4 1347 aa6.58□□□□□ -1.36
CKAP5-212ENST00000533413 RLBP1P12271 317 aa6.58□□□□□ -1.36
CKAP5-212ENST00000533413 ZSCAN20P17040 1043 aaPredicted RBP6.58□□□□□ -1.36
CKAP5-212ENST00000533413 RFX1P22670 979 aa6.58□□□□□ -1.36
CKAP5-212ENST00000533413 MVPQ14764 893 aaKnown RBP6.58□□□□□ -1.36
CKAP5-212ENST00000533413 DZIP1LQ8IYY4 767 aaKnown RBP6.58□□□□□ -1.36
CKAP5-212ENST00000533413 TTC30BQ8N4P2 665 aa6.58□□□□□ -1.36
CKAP5-212ENST00000533413 HELBQ8NG08 1087 aaPredicted RBP6.58□□□□□ -1.36
CKAP5-212ENST00000533413 TRIM44Q96DX7 344 aaPredicted RBP6.58□□□□□ -1.36
CKAP5-212ENST00000533413 LRRC37A3O60309 1634 aa6.57□□□□□ -1.36
CKAP5-212ENST00000533413 FYB1O15117 783 aa6.57□□□□□ -1.36
CKAP5-212ENST00000533413 SLC20A2Q08357 652 aa6.57□□□□□ -1.36
CKAP5-212ENST00000533413 ARHGEF10LQ9HCE6 1279 aa6.57□□□□□ -1.36
CKAP5-212ENST00000533413 ZBTB12Q9Y330 459 aaPredicted RBP6.57□□□□□ -1.36
CKAP5-212ENST00000533413 PEAK1Q9H792 1746 aa6.57□□□□□ -1.36
CKAP5-212ENST00000533413 NUTM2GQ5VZR2 741 aa6.57□□□□□ -1.36
CKAP5-212ENST00000533413 FRMD4BQ9Y2L6 1034 aa6.57□□□□□ -1.36
CKAP5-212ENST00000533413 SPATA31A1Q5TZJ5 1347 aa6.57□□□□□ -1.36
CKAP5-212ENST00000533413 WDR17Q8IZU2 1322 aa6.57□□□□□ -1.36
CKAP5-212ENST00000533413 RGPD3A6NKT7 1758 aaPredicted RBP6.56□□□□□ -1.36
CKAP5-212ENST00000533413 RGPD4Q7Z3J3 1758 aa6.56□□□□□ -1.36
CKAP5-212ENST00000533413 GOLIM4O00461 696 aa6.56□□□□□ -1.36
CKAP5-212ENST00000533413 OFD1O75665 1012 aa6.56□□□□□ -1.36
CKAP5-212ENST00000533413 EVA1CP58658 441 aa6.56□□□□□ -1.36
CKAP5-212ENST00000533413 PRR12Q9ULL5 1215 aa6.56□□□□□ -1.36
CKAP5-212ENST00000533413 TNNQ9UQP3 1299 aa6.56□□□□□ -1.36
CKAP5-212ENST00000533413 FLT4P35916 1363 aa6.56□□□□□ -1.36
CKAP5-212ENST00000533413 HSP90AB1P08238 724 aaKnown RBP6.56□□□□□ -1.36
CKAP5-212ENST00000533413 U2AF1L5P0DN76 240 aaPredicted RBP6.56□□□□□ -1.36
CKAP5-212ENST00000533413 ZC3H6P61129 1189 aaKnown RBP6.56□□□□□ -1.36
CKAP5-212ENST00000533413 U2AF1Q01081 240 aaKnown RBP eCLIP6.56□□□□□ -1.36
CKAP5-212ENST00000533413 IP6K1Q92551 441 aa6.56□□□□□ -1.36
CKAP5-212ENST00000533413 PANK2Q9BZ23 570 aa6.56□□□□□ -1.36
CKAP5-212ENST00000533413 GTPBP4Q9BZE4 634 aaKnown RBP6.56□□□□□ -1.36
CKAP5-212ENST00000533413 SMC4Q9NTJ3 1288 aa6.56□□□□□ -1.36
CKAP5-212ENST00000533413 EXOC5O00471 708 aa6.56□□□□□ -1.36
CKAP5-212ENST00000533413 MTHFSP49914 203 aa6.56□□□□□ -1.36
CKAP5-212ENST00000533413 CSPP1Q1MSJ5 1256 aa6.56□□□□□ -1.36
CKAP5-212ENST00000533413 PPP4R3BQ5MIZ7 849 aa6.56□□□□□ -1.36
CKAP5-212ENST00000533413 ITPRIPQ8IWB1 547 aa6.56□□□□□ -1.36
CKAP5-212ENST00000533413 SPACA7Q96KW9 195 aa6.56□□□□□ -1.36
CKAP5-212ENST00000533413 GBP4Q96PP9 640 aa6.56□□□□□ -1.36
CKAP5-212ENST00000533413 hCG_2014768A0A024R1R8 64 aa6.55□□□□□ -1.36
CKAP5-212ENST00000533413 SOCS7O14512 581 aa6.55□□□□□ -1.36
CKAP5-212ENST00000533413 CT47B1P0C2W7 299 aaPredicted RBP6.55□□□□□ -1.36
CKAP5-212ENST00000533413 TAF3Q5VWG9 929 aa6.55□□□□□ -1.36
CKAP5-212ENST00000533413 GRPEL1Q9HAV7 217 aa6.55□□□□□ -1.36
CKAP5-212ENST00000533413 DDX19BQ9UMR2 479 aa6.55□□□□□ -1.36
CKAP5-212ENST00000533413 PROCA1Q8NCQ7 364 aaPredicted RBP6.55□□□□□ -1.36
CKAP5-212ENST00000533413 ANP32BQ92688 251 aaKnown RBP6.55□□□□□ -1.36
CKAP5-212ENST00000533413 MAP3K20Q9NYL2 800 aaKnown RBP6.55□□□□□ -1.36
CKAP5-212ENST00000533413 KLF15Q9UIH9 416 aa6.55□□□□□ -1.36
CKAP5-212ENST00000533413 PKD1L3Q7Z443 1732 aa6.55□□□□□ -1.36
CKAP5-212ENST00000533413 DISP2A7MBM2 1401 aa6.54□□□□□ -1.36
CKAP5-212ENST00000533413 NCAPD2Q15021 1401 aa6.54□□□□□ -1.36
CKAP5-212ENST00000533413 TAGLNQ01995 201 aaKnown RBP6.54□□□□□ -1.36
CKAP5-212ENST00000533413 SKOR2Q2VWA4 1001 aaPredicted RBP6.54□□□□□ -1.36
CKAP5-212ENST00000533413 WWC3Q9ULE0 1092 aa6.54□□□□□ -1.36
CKAP5-212ENST00000533413 BCL9O00512 1426 aa6.54□□□□□ -1.36
CKAP5-212ENST00000533413 STK25O00506 426 aa6.54□□□□□ -1.36
CKAP5-212ENST00000533413 IPO8O15397 1037 aaKnown RBP6.54□□□□□ -1.36
CKAP5-212ENST00000533413 HDAC1Q13547 482 aaPredicted RBP6.54□□□□□ -1.36
CKAP5-212ENST00000533413 CHRNA2Q15822 529 aa6.54□□□□□ -1.36
CKAP5-212ENST00000533413 GIPC2Q8TF65 315 aa6.54□□□□□ -1.36
CKAP5-212ENST00000533413 FBXO9Q9UK97 447 aaPredicted RBP6.54□□□□□ -1.36
CKAP5-212ENST00000533413 TPX2Q9ULW0 747 aaKnown RBP6.54□□□□□ -1.36
CKAP5-212ENST00000533413 RGPD2P0DJD1 1756 aa6.54□□□□□ -1.36
CKAP5-212ENST00000533413 MAP3K19Q56UN5 1328 aa6.54□□□□□ -1.36
CKAP5-212ENST00000533413 GOLGA6L22H0YM25 854 aa6.53□□□□□ -1.36
CKAP5-212ENST00000533413 HOXC9P31274 260 aa6.53□□□□□ -1.36
CKAP5-212ENST00000533413 AMPHP49418 695 aa6.53□□□□□ -1.36
CKAP5-212ENST00000533413 ILDR2Q71H61 639 aa6.53□□□□□ -1.36
CKAP5-212ENST00000533413 LNPKQ9C0E8 428 aa6.53□□□□□ -1.36
CKAP5-212ENST00000533413 GGNBP2Q9H3C7 697 aa6.53□□□□□ -1.36
CKAP5-212ENST00000533413 MKRN1Q9UHC7 482 aaKnown RBP6.53□□□□□ -1.36
CKAP5-212ENST00000533413 TNS1Q9HBL0 1735 aaKnown RBP6.53□□□□□ -1.36
CKAP5-212ENST00000533413 TNS2Q63HR2 1409 aa6.53□□□□□ -1.36
CKAP5-212ENST00000533413 LETM1O95202 739 aaPredicted RBP6.53□□□□□ -1.36
CKAP5-212ENST00000533413 C9orf131Q5VYM1 1079 aa6.53□□□□□ -1.36
CKAP5-212ENST00000533413 NLGN1Q8N2Q7 840 aa6.53□□□□□ -1.36
CKAP5-212ENST00000533413 ZRANB1Q9UGI0 708 aa6.53□□□□□ -1.36
CKAP5-212ENST00000533413 NHSQ6T4R5 1651 aa6.53□□□□□ -1.36
CKAP5-212ENST00000533413 SBF2Q86WG5 1849 aa6.53□□□□□ -1.36
CKAP5-212ENST00000533413 CFAP69A5D8W1 941 aa6.53□□□□□ -1.36
CKAP5-212ENST00000533413 MKRN4PQ13434 485 aaPredicted RBP6.53□□□□□ -1.36
CKAP5-212ENST00000533413 NBPF9Q3BBW0 867 aa6.53□□□□□ -1.36
CKAP5-212ENST00000533413 C4orf46Q504U0 113 aa6.53□□□□□ -1.36
CKAP5-212ENST00000533413 KIAA1211Q6ZU35 1233 aa6.53□□□□□ -1.36
CKAP5-212ENST00000533413 CACTIN-AS1Q8N1I8 211 aa6.53□□□□□ -1.36
CKAP5-212ENST00000533413 ANKRD24Q8TF21 1146 aa6.53□□□□□ -1.36
CKAP5-212ENST00000533413 STRN4Q9NRL3 753 aa6.53□□□□□ -1.36
CKAP5-212ENST00000533413 PUF60Q9UHX1 559 aaKnown RBP6.53□□□□□ -1.36
CKAP5-212ENST00000533413 COMMD10Q9Y6G5 202 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms