RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 SUSD4Q5VX71 490 aa19.96■□□□□ 0.79
BRPF3-210ENST00000532538 L3MBTL3Q96JM7 780 aaPredicted RBP19.96■□□□□ 0.79
BRPF3-210ENST00000532538 RNF123Q5XPI4 1314 aa19.96■□□□□ 0.79
BRPF3-210ENST00000532538 CC2D2BQ6DHV5 1058 aa19.95■□□□□ 0.78
BRPF3-210ENST00000532538 LMOD1P29536 600 aaPredicted RBP19.94■□□□□ 0.78
BRPF3-210ENST00000532538 PNMA8AQ86V59 439 aaPredicted RBP19.94■□□□□ 0.78
BRPF3-210ENST00000532538 LARGE2Q8N3Y3 721 aa19.94■□□□□ 0.78
BRPF3-210ENST00000532538 NECTIN2Q92692 538 aa19.94■□□□□ 0.78
BRPF3-210ENST00000532538 PPEF1O14829 653 aaPredicted RBP19.93■□□□□ 0.78
BRPF3-210ENST00000532538 LMOD3Q0VAK6 560 aa19.93■□□□□ 0.78
BRPF3-210ENST00000532538 NEUROD2Q15784 382 aa19.93■□□□□ 0.78
BRPF3-210ENST00000532538 CRY2Q49AN0 593 aa19.93■□□□□ 0.78
BRPF3-210ENST00000532538 GIGYF2Q6Y7W6 1299 aaKnown RBP19.93■□□□□ 0.78
BRPF3-210ENST00000532538 NLRP3Q96P20 1036 aa19.93■□□□□ 0.78
BRPF3-210ENST00000532538 PSMD1Q99460 953 aa19.93■□□□□ 0.78
BRPF3-210ENST00000532538 LAS1LQ9Y4W2 734 aaKnown RBP19.93■□□□□ 0.78
BRPF3-210ENST00000532538 ERBB4Q15303 1308 aa19.93■□□□□ 0.78
BRPF3-210ENST00000532538 UBN2Q6ZU65 1347 aa19.93■□□□□ 0.78
BRPF3-210ENST00000532538 ANKRD36CQ5JPF3 1778 aa19.93■□□□□ 0.78
BRPF3-210ENST00000532538 TMEM88BA6NKF7 163 aa19.92■□□□□ 0.78
BRPF3-210ENST00000532538 FZD9O00144 591 aa19.92■□□□□ 0.78
BRPF3-210ENST00000532538 AIMP1Q12904 312 aaKnown RBP19.92■□□□□ 0.78
BRPF3-210ENST00000532538 PARP10Q53GL7 1025 aa19.92■□□□□ 0.78
BRPF3-210ENST00000532538 GPC2Q8N158 579 aa19.92■□□□□ 0.78
BRPF3-210ENST00000532538 ANXA1P04083 346 aa19.91■□□□□ 0.78
BRPF3-210ENST00000532538 RALBP1Q15311 655 aa19.91■□□□□ 0.78
BRPF3-210ENST00000532538 GRIPAP1Q4V328 841 aa19.91■□□□□ 0.78
BRPF3-210ENST00000532538 ZNF34Q8IZ26 560 aa19.91■□□□□ 0.78
BRPF3-210ENST00000532538 UTP14AQ9BVJ6 771 aaKnown RBP19.91■□□□□ 0.78
BRPF3-210ENST00000532538 IBTKQ9P2D0 1353 aaPredicted RBP19.91■□□□□ 0.78
BRPF3-210ENST00000532538 NTSR2O95665 410 aa19.9■□□□□ 0.78
BRPF3-210ENST00000532538 MAP1SQ66K74 1059 aaPredicted RBP19.9■□□□□ 0.78
BRPF3-210ENST00000532538 NIM1KQ8IY84 436 aa19.9■□□□□ 0.78
BRPF3-210ENST00000532538 AIDAQ96BJ3 306 aa19.9■□□□□ 0.78
BRPF3-210ENST00000532538 CRAMP1Q96RY5 1269 aa19.9■□□□□ 0.78
BRPF3-210ENST00000532538 HOXA10P31260 410 aaPredicted RBP19.89■□□□□ 0.77
BRPF3-210ENST00000532538 LAMB2P55268 1798 aa19.89■□□□□ 0.77
BRPF3-210ENST00000532538 CCDC146Q8IYE0 955 aa19.89■□□□□ 0.77
BRPF3-210ENST00000532538 CNTROBQ8N137 903 aa19.89■□□□□ 0.77
BRPF3-210ENST00000532538 PASKQ96RG2 1323 aa19.89■□□□□ 0.77
BRPF3-210ENST00000532538 CNTNAP1P78357 1384 aa19.88■□□□□ 0.77
BRPF3-210ENST00000532538 PPIP5K2O43314 1243 aa19.88■□□□□ 0.77
BRPF3-210ENST00000532538 TMPOP42166 694 aaKnown RBP19.88■□□□□ 0.77
BRPF3-210ENST00000532538 ABT1Q9ULW3 272 aaKnown RBP19.88■□□□□ 0.77
BRPF3-210ENST00000532538 RIC1Q4ADV7 1423 aa19.87■□□□□ 0.77
BRPF3-210ENST00000532538 ITGBL1O95965 494 aaPredicted RBP19.87■□□□□ 0.77
BRPF3-210ENST00000532538 WDR43Q15061 677 aaKnown RBP eCLIP19.87■□□□□ 0.77
BRPF3-210ENST00000532538 HSP90AB3PQ58FF7 597 aa19.87■□□□□ 0.77
BRPF3-210ENST00000532538 PROSER3Q2NL68 480 aa19.86■□□□□ 0.77
BRPF3-210ENST00000532538 C3orf67Q6ZVT6 689 aa19.86■□□□□ 0.77
BRPF3-210ENST00000532538 PAXIP1Q6ZW49 1069 aaPredicted RBP19.86■□□□□ 0.77
BRPF3-210ENST00000532538 COPS6Q7L5N1 327 aa19.86■□□□□ 0.77
BRPF3-210ENST00000532538 BABAM1Q9NWV8 329 aa19.86■□□□□ 0.77
BRPF3-210ENST00000532538 TAF1P21675 1872 aa19.86■□□□□ 0.77
BRPF3-210ENST00000532538 TRPM7Q96QT4 1865 aa19.86■□□□□ 0.77
BRPF3-210ENST00000532538 ADAMTSL1Q8N6G6 1762 aa19.85■□□□□ 0.77
BRPF3-210ENST00000532538 VEGFBP49765 207 aa19.85■□□□□ 0.77
BRPF3-210ENST00000532538 DDX10Q13206 875 aaKnown RBP19.85■□□□□ 0.77
BRPF3-210ENST00000532538 AOC3Q16853 763 aa19.85■□□□□ 0.77
BRPF3-210ENST00000532538 DEFB115Q30KQ5 88 aa19.85■□□□□ 0.77
BRPF3-210ENST00000532538 SUPT20HQ8NEM7 779 aa19.85■□□□□ 0.77
BRPF3-210ENST00000532538 XAGE3Q8WTP9 111 aa19.85■□□□□ 0.77
BRPF3-210ENST00000532538 TRMT112Q9UI30 125 aaKnown RBP19.85■□□□□ 0.77
BRPF3-210ENST00000532538 PDIA6Q15084 440 aa19.84■□□□□ 0.77
BRPF3-210ENST00000532538 DDX46Q7L014 1031 aaKnown RBP19.84■□□□□ 0.77
BRPF3-210ENST00000532538 ZNF428Q96B54 188 aa19.84■□□□□ 0.77
BRPF3-210ENST00000532538 MYBBP1AQ9BQG0 1328 aaKnown RBP19.83■□□□□ 0.77
BRPF3-210ENST00000532538 HCLS1P14317 486 aaPredicted RBP19.83■□□□□ 0.77
BRPF3-210ENST00000532538 DPP8Q6V1X1 898 aaPredicted RBP19.83■□□□□ 0.77
BRPF3-210ENST00000532538 SLC51AQ86UW1 340 aa19.83■□□□□ 0.77
BRPF3-210ENST00000532538 ATP6V0A2Q9Y487 856 aa19.83■□□□□ 0.77
BRPF3-210ENST00000532538 COL4A5P29400 1685 aa19.83■□□□□ 0.76
BRPF3-210ENST00000532538 ABCC4O15439 1325 aa19.82■□□□□ 0.76
BRPF3-210ENST00000532538 FOXN1O15353 648 aa19.82■□□□□ 0.76
BRPF3-210ENST00000532538 EPS15P42566 896 aa19.82■□□□□ 0.76
BRPF3-210ENST00000532538 GRM1Q13255 1194 aa19.82■□□□□ 0.76
BRPF3-210ENST00000532538 SNED1Q8TER0 1413 aa19.82■□□□□ 0.76
BRPF3-210ENST00000532538 LTBP1Q14766 1721 aa19.82■□□□□ 0.76
BRPF3-210ENST00000532538 SLC10A5Q5PT55 438 aa19.81■□□□□ 0.76
BRPF3-210ENST00000532538 NLRP10Q86W26 655 aa19.81■□□□□ 0.76
BRPF3-210ENST00000532538 MPNDQ8N594 471 aa19.81■□□□□ 0.76
BRPF3-210ENST00000532538 DDX21Q9NR30 783 aaKnown RBP eCLIP19.81■□□□□ 0.76
BRPF3-210ENST00000532538 SH3TC1Q8TE82 1336 aa19.8■□□□□ 0.76
BRPF3-210ENST00000532538 BBOX1O75936 387 aa19.8■□□□□ 0.76
BRPF3-210ENST00000532538 CTCFP49711 727 aaPredicted RBP19.8■□□□□ 0.76
BRPF3-210ENST00000532538 TCIRG1Q13488 830 aa19.8■□□□□ 0.76
BRPF3-210ENST00000532538 KRT24Q2M2I5 525 aa19.8■□□□□ 0.76
BRPF3-210ENST00000532538 RUNDC1Q96C34 613 aa19.8■□□□□ 0.76
BRPF3-210ENST00000532538 BCL2L13Q9BXK5 485 aa19.8■□□□□ 0.76
BRPF3-210ENST00000532538 SCNN1DP51172 638 aa19.79■□□□□ 0.76
BRPF3-210ENST00000532538 HDGFL1Q5TGJ6 251 aa19.79■□□□□ 0.76
BRPF3-210ENST00000532538 USP50Q70EL3 339 aaPredicted RBP19.79■□□□□ 0.76
BRPF3-210ENST00000532538 LRP10Q7Z4F1 713 aa19.79■□□□□ 0.76
BRPF3-210ENST00000532538 SP8Q8IXZ3 490 aa19.79■□□□□ 0.76
BRPF3-210ENST00000532538 VPS33BQ9H267 617 aa19.79■□□□□ 0.76
BRPF3-210ENST00000532538 CHPF2Q9P2E5 772 aa19.79■□□□□ 0.76
BRPF3-210ENST00000532538 ZNRF3Q9ULT6 936 aa19.79■□□□□ 0.76
BRPF3-210ENST00000532538 PCNTO95613 3336 aa19.78■□□□□ 0.76
BRPF3-210ENST00000532538 WDR33Q9C0J8 1336 aaKnown RBP19.77■□□□□ 0.76
BRPF3-210ENST00000532538 GRAPQ13588 217 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms