RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 CNTNAP1P78357 1384 aa27.76■■■□□ 2.03
FDFT1-220ENST00000531733 NTSR2O95665 410 aa27.76■■■□□ 2.03
FDFT1-220ENST00000531733 EPHX2P34913 555 aa27.76■■■□□ 2.03
FDFT1-220ENST00000531733 LRP10Q7Z4F1 713 aa27.76■■■□□ 2.03
FDFT1-220ENST00000531733 PSMD1Q99460 953 aa27.76■■■□□ 2.03
FDFT1-220ENST00000531733 RIC1Q4ADV7 1423 aa27.75■■■□□ 2.03
FDFT1-220ENST00000531733 HOXA10P31260 410 aaPredicted RBP27.75■■■□□ 2.03
FDFT1-220ENST00000531733 IBTKQ9P2D0 1353 aaPredicted RBP27.74■■■□□ 2.03
FDFT1-220ENST00000531733 PDIA6Q15084 440 aa27.74■■■□□ 2.03
FDFT1-220ENST00000531733 RPGRQ92834 1020 aaKnown RBP27.74■■■□□ 2.03
FDFT1-220ENST00000531733 MAPK8IP3Q9UPT6 1336 aa27.73■■■□□ 2.03
FDFT1-220ENST00000531733 LTBP1Q14766 1721 aa27.73■■■□□ 2.03
FDFT1-220ENST00000531733 TCERG1O14776 1098 aaKnown RBP27.73■■■□□ 2.03
FDFT1-220ENST00000531733 PROSER3Q2NL68 480 aa27.73■■■□□ 2.03
FDFT1-220ENST00000531733 MAP1SQ66K74 1059 aaPredicted RBP27.73■■■□□ 2.03
FDFT1-220ENST00000531733 GIGYF2Q6Y7W6 1299 aaKnown RBP27.73■■■□□ 2.03
FDFT1-220ENST00000531733 CLEC11AQ9Y240 323 aa27.73■■■□□ 2.03
FDFT1-220ENST00000531733 ANXA1P04083 346 aa27.72■■■□□ 2.03
FDFT1-220ENST00000531733 GPC2Q8N158 579 aa27.72■■■□□ 2.03
FDFT1-220ENST00000531733 TSPYL4Q9UJ04 414 aa27.72■■■□□ 2.03
FDFT1-220ENST00000531733 TMEM88BA6NKF7 163 aa27.7■■■□□ 2.02
FDFT1-220ENST00000531733 EIF2S2P20042 333 aaKnown RBP27.7■■■□□ 2.02
FDFT1-220ENST00000531733 VEGFBP49765 207 aa27.7■■■□□ 2.02
FDFT1-220ENST00000531733 GJA3Q9Y6H8 435 aa27.7■■■□□ 2.02
FDFT1-220ENST00000531733 ERBB4Q15303 1308 aa27.69■■■□□ 2.02
FDFT1-220ENST00000531733 PPEF1O14829 653 aaPredicted RBP27.69■■■□□ 2.02
FDFT1-220ENST00000531733 FOXN1O15353 648 aa27.69■■■□□ 2.02
FDFT1-220ENST00000531733 CC2D2BQ6DHV5 1058 aa27.69■■■□□ 2.02
FDFT1-220ENST00000531733 JDP2Q8WYK2 163 aa27.69■■■□□ 2.02
FDFT1-220ENST00000531733 RIPK4P57078 832 aa27.68■■■□□ 2.02
FDFT1-220ENST00000531733 CNTROBQ8N137 903 aa27.68■■■□□ 2.02
FDFT1-220ENST00000531733 RBM17Q96I25 401 aaKnown RBP27.68■■■□□ 2.02
FDFT1-220ENST00000531733 CRAMP1Q96RY5 1269 aa27.68■■■□□ 2.02
FDFT1-220ENST00000531733 PNMA8AQ86V59 439 aaPredicted RBP27.67■■■□□ 2.02
FDFT1-220ENST00000531733 PNNQ9H307 717 aaKnown RBP27.67■■■□□ 2.02
FDFT1-220ENST00000531733 LARGE2Q8N3Y3 721 aa27.66■■■□□ 2.02
FDFT1-220ENST00000531733 EPS15P42566 896 aa27.65■■■□□ 2.02
FDFT1-220ENST00000531733 SCNN1DP51172 638 aa27.65■■■□□ 2.02
FDFT1-220ENST00000531733 EIF6P56537 245 aaKnown RBP27.65■■■□□ 2.02
FDFT1-220ENST00000531733 FMR1Q06787 632 aaKnown RBP eCLIP27.65■■■□□ 2.02
FDFT1-220ENST00000531733 PPP1R42Q7Z4L9 355 aa27.65■■■□□ 2.02
FDFT1-220ENST00000531733 NECTIN2Q92692 538 aa27.65■■■□□ 2.02
FDFT1-220ENST00000531733 LAMB2P55268 1798 aa27.63■■■□□ 2.01
FDFT1-220ENST00000531733 TMPOP42166 694 aaKnown RBP27.63■■■□□ 2.01
FDFT1-220ENST00000531733 KRT24Q2M2I5 525 aa27.63■■■□□ 2.01
FDFT1-220ENST00000531733 PARP10Q53GL7 1025 aa27.63■■■□□ 2.01
FDFT1-220ENST00000531733 UTP14AQ9BVJ6 771 aaKnown RBP27.63■■■□□ 2.01
FDFT1-220ENST00000531733 ABCC4O15439 1325 aa27.63■■■□□ 2.01
FDFT1-220ENST00000531733 SLC10A5Q5PT55 438 aa27.62■■■□□ 2.01
FDFT1-220ENST00000531733 NLRP3Q96P20 1036 aa27.62■■■□□ 2.01
FDFT1-220ENST00000531733 AOC3Q16853 763 aa27.61■■■□□ 2.01
FDFT1-220ENST00000531733 ANKRD36CQ5JPF3 1778 aa27.6■■■□□ 2.01
FDFT1-220ENST00000531733 AIMP1Q12904 312 aaKnown RBP27.6■■■□□ 2.01
FDFT1-220ENST00000531733 COPS6Q7L5N1 327 aa27.6■■■□□ 2.01
FDFT1-220ENST00000531733 XAGE3Q8WTP9 111 aa27.6■■■□□ 2.01
FDFT1-220ENST00000531733 ZNF428Q96B54 188 aa27.6■■■□□ 2.01
FDFT1-220ENST00000531733 ATP6V0A2Q9Y487 856 aa27.6■■■□□ 2.01
FDFT1-220ENST00000531733 RASSF10A6NK89 507 aa27.59■■■□□ 2.01
FDFT1-220ENST00000531733 PPIP5K2O43314 1243 aa27.59■■■□□ 2.01
FDFT1-220ENST00000531733 HCLS1P14317 486 aaPredicted RBP27.59■■■□□ 2.01
FDFT1-220ENST00000531733 GRIPAP1Q4V328 841 aa27.59■■■□□ 2.01
FDFT1-220ENST00000531733 CCDC146Q8IYE0 955 aa27.59■■■□□ 2.01
FDFT1-220ENST00000531733 LMOD1P29536 600 aaPredicted RBP27.58■■■□□ 2.01
FDFT1-220ENST00000531733 NLRP10Q86W26 655 aa27.58■■■□□ 2.01
FDFT1-220ENST00000531733 NIM1KQ8IY84 436 aa27.58■■■□□ 2.01
FDFT1-220ENST00000531733 DDX21Q9NR30 783 aaKnown RBP eCLIP27.58■■■□□ 2.01
FDFT1-220ENST00000531733 BABAM1Q9NWV8 329 aa27.58■■■□□ 2.01
FDFT1-220ENST00000531733 WBP1LQ9NX94 342 aa27.58■■■□□ 2.01
FDFT1-220ENST00000531733 NEUROD2Q15784 382 aa27.57■■■□□ 2
FDFT1-220ENST00000531733 DEFB115Q30KQ5 88 aa27.57■■■□□ 2
FDFT1-220ENST00000531733 TAF1P21675 1872 aa27.57■■■□□ 2
FDFT1-220ENST00000531733 RALBP1Q15311 655 aa27.56■■■□□ 2
FDFT1-220ENST00000531733 TRAF5O00463 557 aa27.55■■■□□ 2
FDFT1-220ENST00000531733 ABT1Q9ULW3 272 aaKnown RBP27.55■■■□□ 2
FDFT1-220ENST00000531733 CXCL9Q07325 125 aa27.54■■■□□ 2
FDFT1-220ENST00000531733 RTFDC1Q9BY42 306 aaPredicted RBP27.54■■■□□ 2
FDFT1-220ENST00000531733 PRDM10Q9NQV6 1147 aa27.54■■■□□ 2
FDFT1-220ENST00000531733 TRIM35Q9UPQ4 493 aa27.54■■■□□ 2
FDFT1-220ENST00000531733 WDR33Q9C0J8 1336 aaKnown RBP27.53■■■□□ 2
FDFT1-220ENST00000531733 CHL1O00533 1208 aa27.53■■■□□ 2
FDFT1-220ENST00000531733 CTCFP49711 727 aaPredicted RBP27.53■■■□□ 2
FDFT1-220ENST00000531733 LMOD3Q0VAK6 560 aa27.53■■■□□ 2
FDFT1-220ENST00000531733 TCIRG1Q13488 830 aa27.53■■■□□ 2
FDFT1-220ENST00000531733 AIDAQ96BJ3 306 aa27.53■■■□□ 2
FDFT1-220ENST00000531733 LBX1P52954 281 aa27.52■■■□□ 2
FDFT1-220ENST00000531733 CST9Q5W186 159 aa27.52■■■□□ 2
FDFT1-220ENST00000531733 USP50Q70EL3 339 aaPredicted RBP27.52■■■□□ 2
FDFT1-220ENST00000531733 GPRC5DQ9NZD1 345 aa27.52■■■□□ 2
FDFT1-220ENST00000531733 CHPF2Q9P2E5 772 aa27.52■■■□□ 2
FDFT1-220ENST00000531733 TRMT112Q9UI30 125 aaKnown RBP27.52■■■□□ 2
FDFT1-220ENST00000531733 HSP90AB3PQ58FF7 597 aa27.51■■□□□ 1.99
FDFT1-220ENST00000531733 SP8Q8IXZ3 490 aa27.51■■□□□ 1.99
FDFT1-220ENST00000531733 ZNRF3Q9ULT6 936 aa27.51■■□□□ 1.99
FDFT1-220ENST00000531733 LAS1LQ9Y4W2 734 aaKnown RBP27.51■■□□□ 1.99
FDFT1-220ENST00000531733 BBOX1O75936 387 aa27.5■■□□□ 1.99
FDFT1-220ENST00000531733 DPP8Q6V1X1 898 aaPredicted RBP27.5■■□□□ 1.99
FDFT1-220ENST00000531733 DUOX1Q9NRD9 1551 aa27.5■■□□□ 1.99
FDFT1-220ENST00000531733 COL4A1P02462 1669 aa27.49■■□□□ 1.99
FDFT1-220ENST00000531733 SH3TC1Q8TE82 1336 aa27.49■■□□□ 1.99
FDFT1-220ENST00000531733 GMPSP49915 693 aaPredicted RBP27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms