RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 RIC1Q4ADV7 1423 aa20.78■□□□□ 0.92
CHMP4A-204ENST00000530996 PPEF1O14829 653 aaPredicted RBP20.77■□□□□ 0.92
CHMP4A-204ENST00000530996 EPHX2P34913 555 aa20.77■□□□□ 0.92
CHMP4A-204ENST00000530996 PPP1R42Q7Z4L9 355 aa20.77■□□□□ 0.92
CHMP4A-204ENST00000530996 RBM17Q96I25 401 aaKnown RBP20.77■□□□□ 0.92
CHMP4A-204ENST00000530996 PSMD1Q99460 953 aa20.77■□□□□ 0.92
CHMP4A-204ENST00000530996 GJA3Q9Y6H8 435 aa20.77■□□□□ 0.92
CHMP4A-204ENST00000530996 NTSR2O95665 410 aa20.76■□□□□ 0.91
CHMP4A-204ENST00000530996 EIF6P56537 245 aaKnown RBP20.76■□□□□ 0.91
CHMP4A-204ENST00000530996 PARP10Q53GL7 1025 aa20.76■□□□□ 0.91
CHMP4A-204ENST00000530996 CC2D2BQ6DHV5 1058 aa20.76■□□□□ 0.91
CHMP4A-204ENST00000530996 GIGYF2Q6Y7W6 1299 aaKnown RBP20.76■□□□□ 0.91
CHMP4A-204ENST00000530996 TMX4Q9H1E5 349 aaPredicted RBP20.76■□□□□ 0.91
CHMP4A-204ENST00000530996 GPC2Q8N158 579 aa20.75■□□□□ 0.91
CHMP4A-204ENST00000530996 LARGE2Q8N3Y3 721 aa20.75■□□□□ 0.91
CHMP4A-204ENST00000530996 NECTIN2Q92692 538 aa20.75■□□□□ 0.91
CHMP4A-204ENST00000530996 SCN4AP35499 1836 aa20.74■□□□□ 0.91
CHMP4A-204ENST00000530996 FZD9O00144 591 aa20.74■□□□□ 0.91
CHMP4A-204ENST00000530996 ANXA1P04083 346 aa20.74■□□□□ 0.91
CHMP4A-204ENST00000530996 LMOD1P29536 600 aaPredicted RBP20.74■□□□□ 0.91
CHMP4A-204ENST00000530996 RALBP1Q15311 655 aa20.74■□□□□ 0.91
CHMP4A-204ENST00000530996 PNMA8AQ86V59 439 aaPredicted RBP20.74■□□□□ 0.91
CHMP4A-204ENST00000530996 ZNF34Q8IZ26 560 aa20.74■□□□□ 0.91
CHMP4A-204ENST00000530996 PCNTO95613 3336 aa20.74■□□□□ 0.91
CHMP4A-204ENST00000530996 PASKQ96RG2 1323 aa20.74■□□□□ 0.91
CHMP4A-204ENST00000530996 CNTNAP1P78357 1384 aa20.73■□□□□ 0.91
CHMP4A-204ENST00000530996 SNED1Q8TER0 1413 aa20.73■□□□□ 0.91
CHMP4A-204ENST00000530996 NEUROD2Q15784 382 aa20.73■□□□□ 0.91
CHMP4A-204ENST00000530996 NUP98P52948 1817 aa20.73■□□□□ 0.91
CHMP4A-204ENST00000530996 TMEM88BA6NKF7 163 aa20.72■□□□□ 0.91
CHMP4A-204ENST00000530996 HOXA10P31260 410 aaPredicted RBP20.72■□□□□ 0.91
CHMP4A-204ENST00000530996 AIMP1Q12904 312 aaKnown RBP20.72■□□□□ 0.91
CHMP4A-204ENST00000530996 PROSER3Q2NL68 480 aa20.72■□□□□ 0.91
CHMP4A-204ENST00000530996 C3orf67Q6ZVT6 689 aa20.72■□□□□ 0.91
CHMP4A-204ENST00000530996 SLC51AQ86UW1 340 aa20.72■□□□□ 0.91
CHMP4A-204ENST00000530996 NIM1KQ8IY84 436 aa20.72■□□□□ 0.91
CHMP4A-204ENST00000530996 CCDC146Q8IYE0 955 aa20.72■□□□□ 0.91
CHMP4A-204ENST00000530996 NLRP3Q96P20 1036 aa20.72■□□□□ 0.91
CHMP4A-204ENST00000530996 CRAMP1Q96RY5 1269 aa20.72■□□□□ 0.91
CHMP4A-204ENST00000530996 UTP14AQ9BVJ6 771 aaKnown RBP20.72■□□□□ 0.91
CHMP4A-204ENST00000530996 TMPOP42166 694 aaKnown RBP20.71■□□□□ 0.91
CHMP4A-204ENST00000530996 GRIPAP1Q4V328 841 aa20.71■□□□□ 0.91
CHMP4A-204ENST00000530996 MAP1SQ66K74 1059 aaPredicted RBP20.71■□□□□ 0.91
CHMP4A-204ENST00000530996 LAS1LQ9Y4W2 734 aaKnown RBP20.71■□□□□ 0.91
CHMP4A-204ENST00000530996 COL4A5P29400 1685 aa20.7■□□□□ 0.91
CHMP4A-204ENST00000530996 PPIP5K2O43314 1243 aa20.7■□□□□ 0.9
CHMP4A-204ENST00000530996 WDR43Q15061 677 aaKnown RBP eCLIP20.7■□□□□ 0.9
CHMP4A-204ENST00000530996 MYBBP1AQ9BQG0 1328 aaKnown RBP20.7■□□□□ 0.9
CHMP4A-204ENST00000530996 PDIA6Q15084 440 aa20.69■□□□□ 0.9
CHMP4A-204ENST00000530996 AIDAQ96BJ3 306 aa20.69■□□□□ 0.9
CHMP4A-204ENST00000530996 AOC3Q16853 763 aa20.68■□□□□ 0.9
CHMP4A-204ENST00000530996 HSP90AB3PQ58FF7 597 aa20.68■□□□□ 0.9
CHMP4A-204ENST00000530996 CNTROBQ8N137 903 aa20.68■□□□□ 0.9
CHMP4A-204ENST00000530996 XAGE3Q8WTP9 111 aa20.68■□□□□ 0.9
CHMP4A-204ENST00000530996 BABAM1Q9NWV8 329 aa20.68■□□□□ 0.9
CHMP4A-204ENST00000530996 ABT1Q9ULW3 272 aaKnown RBP20.68■□□□□ 0.9
CHMP4A-204ENST00000530996 ABCC4O15439 1325 aa20.68■□□□□ 0.9
CHMP4A-204ENST00000530996 ITGBL1O95965 494 aaPredicted RBP20.67■□□□□ 0.9
CHMP4A-204ENST00000530996 COPS6Q7L5N1 327 aa20.67■□□□□ 0.9
CHMP4A-204ENST00000530996 LRP10Q7Z4F1 713 aa20.67■□□□□ 0.9
CHMP4A-204ENST00000530996 ADAMTSL1Q8N6G6 1762 aa20.67■□□□□ 0.9
CHMP4A-204ENST00000530996 VEGFBP49765 207 aa20.66■□□□□ 0.9
CHMP4A-204ENST00000530996 DDX10Q13206 875 aaKnown RBP20.66■□□□□ 0.9
CHMP4A-204ENST00000530996 TRMT112Q9UI30 125 aaKnown RBP20.66■□□□□ 0.9
CHMP4A-204ENST00000530996 HCLS1P14317 486 aaPredicted RBP20.65■□□□□ 0.9
CHMP4A-204ENST00000530996 KRT24Q2M2I5 525 aa20.65■□□□□ 0.9
CHMP4A-204ENST00000530996 DPP8Q6V1X1 898 aaPredicted RBP20.65■□□□□ 0.9
CHMP4A-204ENST00000530996 PAXIP1Q6ZW49 1069 aaPredicted RBP20.65■□□□□ 0.9
CHMP4A-204ENST00000530996 SUPT20HQ8NEM7 779 aa20.65■□□□□ 0.9
CHMP4A-204ENST00000530996 ZNF428Q96B54 188 aa20.65■□□□□ 0.9
CHMP4A-204ENST00000530996 ATP6V0A2Q9Y487 856 aa20.65■□□□□ 0.9
CHMP4A-204ENST00000530996 FOXN1O15353 648 aa20.64■□□□□ 0.89
CHMP4A-204ENST00000530996 EPS15P42566 896 aa20.64■□□□□ 0.89
CHMP4A-204ENST00000530996 SCNN1DP51172 638 aa20.64■□□□□ 0.89
CHMP4A-204ENST00000530996 HDGFL1Q5TGJ6 251 aa20.64■□□□□ 0.89
CHMP4A-204ENST00000530996 DDX46Q7L014 1031 aaKnown RBP20.64■□□□□ 0.89
CHMP4A-204ENST00000530996 NLRP10Q86W26 655 aa20.64■□□□□ 0.89
CHMP4A-204ENST00000530996 SH3TC1Q8TE82 1336 aa20.63■□□□□ 0.89
CHMP4A-204ENST00000530996 DDX21Q9NR30 783 aaKnown RBP eCLIP20.63■□□□□ 0.89
CHMP4A-204ENST00000530996 CHPF2Q9P2E5 772 aa20.63■□□□□ 0.89
CHMP4A-204ENST00000530996 RUNDC1Q96C34 613 aa20.62■□□□□ 0.89
CHMP4A-204ENST00000530996 LTBP1Q14766 1721 aa20.61■□□□□ 0.89
CHMP4A-204ENST00000530996 GRM1Q13255 1194 aa20.61■□□□□ 0.89
CHMP4A-204ENST00000530996 TCIRG1Q13488 830 aa20.61■□□□□ 0.89
CHMP4A-204ENST00000530996 DEFB115Q30KQ5 88 aa20.61■□□□□ 0.89
CHMP4A-204ENST00000530996 SLC10A5Q5PT55 438 aa20.61■□□□□ 0.89
CHMP4A-204ENST00000530996 MPNDQ8N594 471 aa20.61■□□□□ 0.89
CHMP4A-204ENST00000530996 ANKRD36CQ5JPF3 1778 aa20.61■□□□□ 0.89
CHMP4A-204ENST00000530996 CTCFP49711 727 aaPredicted RBP20.6■□□□□ 0.89
CHMP4A-204ENST00000530996 GRAPQ13588 217 aa20.6■□□□□ 0.89
CHMP4A-204ENST00000530996 USP50Q70EL3 339 aaPredicted RBP20.6■□□□□ 0.89
CHMP4A-204ENST00000530996 GRAPLQ8TC17 118 aaPredicted RBP20.6■□□□□ 0.89
CHMP4A-204ENST00000530996 RASSF10A6NK89 507 aa20.59■□□□□ 0.89
CHMP4A-204ENST00000530996 CHL1O00533 1208 aa20.59■□□□□ 0.89
CHMP4A-204ENST00000530996 BBOX1O75936 387 aa20.59■□□□□ 0.89
CHMP4A-204ENST00000530996 VPS33BQ9H267 617 aa20.59■□□□□ 0.89
CHMP4A-204ENST00000530996 ZNRF3Q9ULT6 936 aa20.59■□□□□ 0.89
CHMP4A-204ENST00000530996 SP8Q8IXZ3 490 aa20.58■□□□□ 0.89
CHMP4A-204ENST00000530996 BCL2L13Q9BXK5 485 aa20.58■□□□□ 0.89
CHMP4A-204ENST00000530996 ADARB2Q9NS39 739 aaKnown RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms