RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 EIF2AK4Q9P2K8 1649 aaKnown RBP13.24□□□□□ -0.29
CCDC90B-217ENST00000530253 THBS1P07996 1170 aa13.24□□□□□ -0.29
CCDC90B-217ENST00000530253 TLR1Q15399 786 aa13.24□□□□□ -0.29
CCDC90B-217ENST00000530253 GALNT6Q8NCL4 622 aa13.24□□□□□ -0.29
CCDC90B-217ENST00000530253 KLRG1Q96E93 195 aa13.24□□□□□ -0.29
CCDC90B-217ENST00000530253 SPOCK3Q9BQ16 436 aa13.24□□□□□ -0.29
CCDC90B-217ENST00000530253 CHIC2Q9UKJ5 165 aa13.24□□□□□ -0.29
CCDC90B-217ENST00000530253 TBC1D2BQ9UPU7 963 aa13.24□□□□□ -0.29
CCDC90B-217ENST00000530253 ERBINQ96RT1 1412 aa13.23□□□□□ -0.29
CCDC90B-217ENST00000530253 PIK3R2O00459 728 aa13.23□□□□□ -0.29
CCDC90B-217ENST00000530253 MSX1P28360 303 aa13.23□□□□□ -0.29
CCDC90B-217ENST00000530253 MLECQ14165 292 aa13.23□□□□□ -0.29
CCDC90B-217ENST00000530253 RUBCNLQ9H714 662 aa13.23□□□□□ -0.29
CCDC90B-217ENST00000530253 MROH1Q8NDA8 1641 aa13.22□□□□□ -0.29
CCDC90B-217ENST00000530253 RNF17Q9BXT8 1623 aaKnown RBP13.22□□□□□ -0.29
CCDC90B-217ENST00000530253 BMP4P12644 408 aa13.22□□□□□ -0.29
CCDC90B-217ENST00000530253 FIGNL1Q6PIW4 674 aa13.22□□□□□ -0.29
CCDC90B-217ENST00000530253 PHTF2Q8N3S3 785 aa13.22□□□□□ -0.29
CCDC90B-217ENST00000530253 CRISPLD1Q9H336 500 aa13.22□□□□□ -0.29
CCDC90B-217ENST00000530253 ETNK1Q9HBU6 452 aa13.22□□□□□ -0.29
CCDC90B-217ENST00000530253 RIMS1Q86UR5 1692 aaKnown RBP13.21□□□□□ -0.29
CCDC90B-217ENST00000530253 GCC2Q8IWJ2 1684 aa13.21□□□□□ -0.29
CCDC90B-217ENST00000530253 ITGAEP38570 1179 aa13.21□□□□□ -0.29
CCDC90B-217ENST00000530253 TBC1D9Q6ZT07 1266 aa13.21□□□□□ -0.29
CCDC90B-217ENST00000530253 C1orf216Q8TAB5 229 aa13.21□□□□□ -0.29
CCDC90B-217ENST00000530253 RRP7BPQ9NSQ0 103 aa13.21□□□□□ -0.29
CCDC90B-217ENST00000530253 PTPRMP28827 1452 aa13.21□□□□□ -0.3
CCDC90B-217ENST00000530253 HFM1A2PYH4 1435 aa13.21□□□□□ -0.3
CCDC90B-217ENST00000530253 NAIPQ13075 1403 aa13.21□□□□□ -0.3
CCDC90B-217ENST00000530253 UBAP2LQ14157 1087 aaKnown RBP13.2□□□□□ -0.3
CCDC90B-217ENST00000530253 EDARADDQ8WWZ3 215 aa13.2□□□□□ -0.3
CCDC90B-217ENST00000530253 DEPDC5O75140 1603 aa13.2□□□□□ -0.3
CCDC90B-217ENST00000530253 FGFR3P22607 806 aa13.19□□□□□ -0.3
CCDC90B-217ENST00000530253 OXLD1Q5BKU9 147 aa13.19□□□□□ -0.3
CCDC90B-217ENST00000530253 SLCO4C1Q6ZQN7 724 aa13.19□□□□□ -0.3
CCDC90B-217ENST00000530253 RRAGCQ9HB90 399 aa13.19□□□□□ -0.3
CCDC90B-217ENST00000530253 ANKRD50Q9ULJ7 1429 aa13.19□□□□□ -0.3
CCDC90B-217ENST00000530253 PRDM15P57071 1507 aaPredicted RBP13.18□□□□□ -0.3
CCDC90B-217ENST00000530253 MAP7D1Q3KQU3 841 aa13.18□□□□□ -0.3
CCDC90B-217ENST00000530253 SHISA8B8ZZ34 492 aa13.17□□□□□ -0.3
CCDC90B-217ENST00000530253 SNRPNP63162 240 aaKnown RBP13.17□□□□□ -0.3
CCDC90B-217ENST00000530253 ABHD17AQ96GS6 310 aa13.17□□□□□ -0.3
CCDC90B-217ENST00000530253 UNC13BO14795 1591 aa13.16□□□□□ -0.3
CCDC90B-217ENST00000530253 AMPD1P23109 780 aa13.16□□□□□ -0.3
CCDC90B-217ENST00000530253 WASHC4Q2M389 1173 aa13.16□□□□□ -0.3
CCDC90B-217ENST00000530253 FAM135AQ9P2D6 1515 aa13.16□□□□□ -0.3
CCDC90B-217ENST00000530253 VWDEQ8N2E2 1590 aa13.15□□□□□ -0.3
CCDC90B-217ENST00000530253 FER1L4A9Z1Z3 1794 aa13.15□□□□□ -0.3
CCDC90B-217ENST00000530253 KDM5DQ9BY66 1539 aa13.15□□□□□ -0.3
CCDC90B-217ENST00000530253 ADAM23O75077 832 aa13.15□□□□□ -0.3
CCDC90B-217ENST00000530253 PROCP04070 461 aa13.15□□□□□ -0.3
CCDC90B-217ENST00000530253 PLA2G4AP47712 749 aa13.15□□□□□ -0.3
CCDC90B-217ENST00000530253 IRF5Q13568 498 aa13.15□□□□□ -0.3
CCDC90B-217ENST00000530253 NIFKQ9BYG3 293 aaKnown RBP13.15□□□□□ -0.3
CCDC90B-217ENST00000530253 NDFIP2Q9NV92 336 aa13.15□□□□□ -0.3
CCDC90B-217ENST00000530253 KIF3BO15066 747 aa13.14□□□□□ -0.31
CCDC90B-217ENST00000530253 INHAP05111 366 aa13.14□□□□□ -0.31
CCDC90B-217ENST00000530253 SOX11P35716 441 aa13.14□□□□□ -0.31
CCDC90B-217ENST00000530253 GDF10P55107 478 aa13.14□□□□□ -0.31
CCDC90B-217ENST00000530253 NLRP8Q86W28 1048 aa13.14□□□□□ -0.31
CCDC90B-217ENST00000530253 BNIP3LO60238 219 aa13.13□□□□□ -0.31
CCDC90B-217ENST00000530253 ITGB2P05107 769 aa13.13□□□□□ -0.31
CCDC90B-217ENST00000530253 ARAFP10398 606 aa13.13□□□□□ -0.31
CCDC90B-217ENST00000530253 TSGA10IPQ3SY00 556 aa13.13□□□□□ -0.31
CCDC90B-217ENST00000530253 PCDHGC4Q9Y5F7 938 aa13.13□□□□□ -0.31
CCDC90B-217ENST00000530253 ABCC3O15438 1527 aa13.13□□□□□ -0.31
CCDC90B-217ENST00000530253 NBPF1Q3BBV0 1214 aa13.12□□□□□ -0.31
CCDC90B-217ENST00000530253 C1orf229Q6ZS94 237 aaPredicted RBP13.12□□□□□ -0.31
CCDC90B-217ENST00000530253 GGA1Q9UJY5 639 aa13.12□□□□□ -0.31
CCDC90B-217ENST00000530253 ZC3H13Q5T200 1668 aaKnown RBP13.12□□□□□ -0.31
CCDC90B-217ENST00000530253 CEBPAP49715 358 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-217ENST00000530253 SCNN1DP51172 638 aa13.11□□□□□ -0.31
CCDC90B-217ENST00000530253 VAC14Q08AM6 782 aa13.11□□□□□ -0.31
CCDC90B-217ENST00000530253 LMTK2Q8IWU2 1503 aa13.11□□□□□ -0.31
CCDC90B-217ENST00000530253 MROH2AA6NES4 1674 aa13.11□□□□□ -0.31
CCDC90B-217ENST00000530253 CLTCQ00610 1675 aaKnown RBP13.11□□□□□ -0.31
CCDC90B-217ENST00000530253 SMTNP53814 917 aa13.1□□□□□ -0.31
CCDC90B-217ENST00000530253 GGT6Q6P531 493 aa13.1□□□□□ -0.31
CCDC90B-217ENST00000530253 PLPP7Q8NBV4 271 aa13.1□□□□□ -0.31
CCDC90B-217ENST00000530253 CNTLNQ9NXG0 1405 aa13.1□□□□□ -0.31
CCDC90B-217ENST00000530253 IQGAP3Q86VI3 1631 aa13.1□□□□□ -0.31
CCDC90B-217ENST00000530253 C2CD2LO14523 706 aa13.09□□□□□ -0.31
CCDC90B-217ENST00000530253 GNB5O14775 395 aa13.09□□□□□ -0.31
CCDC90B-217ENST00000530253 STAU1O95793 577 aaKnown RBP13.09□□□□□ -0.31
CCDC90B-217ENST00000530253 TRIM26Q12899 539 aaPredicted RBP13.09□□□□□ -0.31
CCDC90B-217ENST00000530253 SEMA3FQ13275 785 aa13.09□□□□□ -0.31
CCDC90B-217ENST00000530253 SETD5Q9C0A6 1442 aa13.09□□□□□ -0.31
CCDC90B-217ENST00000530253 CEP152O94986 1710 aa13.08□□□□□ -0.32
CCDC90B-217ENST00000530253 KRBA1A5PL33 1030 aa13.08□□□□□ -0.32
CCDC90B-217ENST00000530253 EPXP11678 715 aa13.08□□□□□ -0.32
CCDC90B-217ENST00000530253 CTBSQ01459 385 aa13.08□□□□□ -0.32
CCDC90B-217ENST00000530253 AIDAQ96BJ3 306 aa13.08□□□□□ -0.32
CCDC90B-217ENST00000530253 ZCCHC2Q9C0B9 1178 aaKnown RBP13.08□□□□□ -0.32
CCDC90B-217ENST00000530253 NOP53Q9NZM5 478 aaKnown RBP13.08□□□□□ -0.32
CCDC90B-217ENST00000530253 CAMSAP1Q5T5Y3 1602 aa13.07□□□□□ -0.32
CCDC90B-217ENST00000530253 ATXN7O15265 892 aaPredicted RBP13.07□□□□□ -0.32
CCDC90B-217ENST00000530253 TATP17735 454 aaPredicted RBP13.07□□□□□ -0.32
CCDC90B-217ENST00000530253 ATP4AP20648 1035 aa13.07□□□□□ -0.32
CCDC90B-217ENST00000530253 ABL2P42684 1182 aa13.07□□□□□ -0.32
CCDC90B-217ENST00000530253 HSPA2P54652 639 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms