RNA–Protein interactions for RNA: ENST00000529577.5

SF3B2-207, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-207ENST00000529577 GTF2E1P29083 439 aaPredicted RBP27.03■■□□□ 1.92
SF3B2-207ENST00000529577 RIPK4P57078 832 aa27.03■■□□□ 1.92
SF3B2-207ENST00000529577 KRT24Q2M2I5 525 aa27.03■■□□□ 1.92
SF3B2-207ENST00000529577 ANKRD36CQ5JPF3 1778 aa27.03■■□□□ 1.92
SF3B2-207ENST00000529577 PSMD1Q99460 953 aa27.03■■□□□ 1.92
SF3B2-207ENST00000529577 CREBZFQ9NS37 354 aa27.03■■□□□ 1.92
SF3B2-207ENST00000529577 MKRN1Q9UHC7 482 aaKnown RBP27.03■■□□□ 1.92
SF3B2-207ENST00000529577 TSPYL4Q9UJ04 414 aa27.03■■□□□ 1.92
SF3B2-207ENST00000529577 MAPK8IP3Q9UPT6 1336 aa27.03■■□□□ 1.92
SF3B2-207ENST00000529577 RNF123Q5XPI4 1314 aa27.02■■□□□ 1.92
SF3B2-207ENST00000529577 TMPOP42166 694 aaKnown RBP27.02■■□□□ 1.92
SF3B2-207ENST00000529577 LDHDQ86WU2 507 aa27.02■■□□□ 1.92
SF3B2-207ENST00000529577 ERBB4Q15303 1308 aa27.01■■□□□ 1.91
SF3B2-207ENST00000529577 NEFMP07197 916 aa27.01■■□□□ 1.91
SF3B2-207ENST00000529577 EIF2S2P20042 333 aaKnown RBP27■■□□□ 1.91
SF3B2-207ENST00000529577 IQCA1LA6NCM1 817 aa26.99■■□□□ 1.91
SF3B2-207ENST00000529577 TAF1P21675 1872 aa26.98■■□□□ 1.91
SF3B2-207ENST00000529577 TCERG1O14776 1098 aaKnown RBP26.98■■□□□ 1.91
SF3B2-207ENST00000529577 EPHX2P34913 555 aa26.98■■□□□ 1.91
SF3B2-207ENST00000529577 CCDC146Q8IYE0 955 aa26.98■■□□□ 1.91
SF3B2-207ENST00000529577 NECTIN2Q92692 538 aa26.98■■□□□ 1.91
SF3B2-207ENST00000529577 CRAMP1Q96RY5 1269 aa26.98■■□□□ 1.91
SF3B2-207ENST00000529577 HACL1Q9UJ83 578 aa26.98■■□□□ 1.91
SF3B2-207ENST00000529577 CNTNAP1P78357 1384 aa26.97■■□□□ 1.91
SF3B2-207ENST00000529577 EAPPQ56P03 285 aaPredicted RBP26.97■■□□□ 1.91
SF3B2-207ENST00000529577 TRIM35Q9UPQ4 493 aa26.97■■□□□ 1.91
SF3B2-207ENST00000529577 COL4A1P02462 1669 aa26.97■■□□□ 1.91
SF3B2-207ENST00000529577 RALBP1Q15311 655 aa26.96■■□□□ 1.91
SF3B2-207ENST00000529577 SLC10A5Q5PT55 438 aa26.96■■□□□ 1.91
SF3B2-207ENST00000529577 RPGRQ92834 1020 aaKnown RBP26.96■■□□□ 1.91
SF3B2-207ENST00000529577 PPEF1O14829 653 aaPredicted RBP26.95■■□□□ 1.9
SF3B2-207ENST00000529577 FMR1Q06787 632 aaKnown RBP eCLIP26.95■■□□□ 1.9
SF3B2-207ENST00000529577 MAP1SQ66K74 1059 aaPredicted RBP26.95■■□□□ 1.9
SF3B2-207ENST00000529577 GPC2Q8N158 579 aa26.95■■□□□ 1.9
SF3B2-207ENST00000529577 PNNQ9H307 717 aaKnown RBP26.95■■□□□ 1.9
SF3B2-207ENST00000529577 SCNN1DP51172 638 aa26.94■■□□□ 1.9
SF3B2-207ENST00000529577 COPS6Q7L5N1 327 aa26.94■■□□□ 1.9
SF3B2-207ENST00000529577 ABCC4O15439 1325 aa26.93■■□□□ 1.9
SF3B2-207ENST00000529577 DDX10Q13206 875 aaKnown RBP26.93■■□□□ 1.9
SF3B2-207ENST00000529577 CC2D2BQ6DHV5 1058 aa26.93■■□□□ 1.9
SF3B2-207ENST00000529577 XAGE3Q8WTP9 111 aa26.93■■□□□ 1.9
SF3B2-207ENST00000529577 ZNF428Q96B54 188 aa26.93■■□□□ 1.9
SF3B2-207ENST00000529577 BABAM1Q9NWV8 329 aa26.93■■□□□ 1.9
SF3B2-207ENST00000529577 CHL1O00533 1208 aa26.92■■□□□ 1.9
SF3B2-207ENST00000529577 PARP10Q53GL7 1025 aa26.92■■□□□ 1.9
SF3B2-207ENST00000529577 NLRP10Q86W26 655 aa26.92■■□□□ 1.9
SF3B2-207ENST00000529577 RBM17Q96I25 401 aaKnown RBP26.92■■□□□ 1.9
SF3B2-207ENST00000529577 DDX60Q8IY21 1712 aaKnown RBP26.91■■□□□ 1.9
SF3B2-207ENST00000529577 EPS15P42566 896 aa26.91■■□□□ 1.9
SF3B2-207ENST00000529577 NEUROD2Q15784 382 aa26.91■■□□□ 1.9
SF3B2-207ENST00000529577 PPP1R42Q7Z4L9 355 aa26.91■■□□□ 1.9
SF3B2-207ENST00000529577 TNS4Q8IZW8 715 aa26.91■■□□□ 1.9
SF3B2-207ENST00000529577 UTP14AQ9BVJ6 771 aaKnown RBP26.91■■□□□ 1.9
SF3B2-207ENST00000529577 GJA3Q9Y6H8 435 aa26.91■■□□□ 1.9
SF3B2-207ENST00000529577 DUOX1Q9NRD9 1551 aa26.9■■□□□ 1.9
SF3B2-207ENST00000529577 HCLS1P14317 486 aaPredicted RBP26.9■■□□□ 1.9
SF3B2-207ENST00000529577 VEGFBP49765 207 aa26.9■■□□□ 1.9
SF3B2-207ENST00000529577 AIMP1Q12904 312 aaKnown RBP26.9■■□□□ 1.9
SF3B2-207ENST00000529577 CNTROBQ8N137 903 aa26.9■■□□□ 1.9
SF3B2-207ENST00000529577 MYBBP1AQ9BQG0 1328 aaKnown RBP26.9■■□□□ 1.9
SF3B2-207ENST00000529577 FOXN1O15353 648 aa26.89■■□□□ 1.9
SF3B2-207ENST00000529577 CLEC11AQ9Y240 323 aa26.89■■□□□ 1.9
SF3B2-207ENST00000529577 ATP6V0A2Q9Y487 856 aa26.89■■□□□ 1.9
SF3B2-207ENST00000529577 TMEM88BA6NKF7 163 aa26.88■■□□□ 1.89
SF3B2-207ENST00000529577 AOC3Q16853 763 aa26.88■■□□□ 1.89
SF3B2-207ENST00000529577 LARGE2Q8N3Y3 721 aa26.88■■□□□ 1.89
SF3B2-207ENST00000529577 JDP2Q8WYK2 163 aa26.88■■□□□ 1.89
SF3B2-207ENST00000529577 NLRP3Q96P20 1036 aa26.88■■□□□ 1.89
SF3B2-207ENST00000529577 CAPN15O75808 1086 aa26.87■■□□□ 1.89
SF3B2-207ENST00000529577 DDX21Q9NR30 783 aaKnown RBP eCLIP26.87■■□□□ 1.89
SF3B2-207ENST00000529577 TCIRG1Q13488 830 aa26.86■■□□□ 1.89
SF3B2-207ENST00000529577 PNMA8AQ86V59 439 aaPredicted RBP26.86■■□□□ 1.89
SF3B2-207ENST00000529577 RTFDC1Q9BY42 306 aaPredicted RBP26.86■■□□□ 1.89
SF3B2-207ENST00000529577 CHPF2Q9P2E5 772 aa26.86■■□□□ 1.89
SF3B2-207ENST00000529577 ADAMTS8Q9UP79 889 aa26.86■■□□□ 1.89
SF3B2-207ENST00000529577 LRRC37AA6NMS7 1700 aa26.85■■□□□ 1.89
SF3B2-207ENST00000529577 EIF6P56537 245 aaKnown RBP26.85■■□□□ 1.89
SF3B2-207ENST00000529577 RASSF10A6NK89 507 aa26.83■■□□□ 1.89
SF3B2-207ENST00000529577 PPIP5K2O43314 1243 aa26.83■■□□□ 1.89
SF3B2-207ENST00000529577 LMOD3Q0VAK6 560 aa26.83■■□□□ 1.89
SF3B2-207ENST00000529577 RUNDC1Q96C34 613 aa26.83■■□□□ 1.89
SF3B2-207ENST00000529577 CXCL9Q07325 125 aa26.82■■□□□ 1.88
SF3B2-207ENST00000529577 GRIPAP1Q4V328 841 aa26.82■■□□□ 1.88
SF3B2-207ENST00000529577 LAS1LQ9Y4W2 734 aaKnown RBP26.82■■□□□ 1.88
SF3B2-207ENST00000529577 SP8Q8IXZ3 490 aa26.81■■□□□ 1.88
SF3B2-207ENST00000529577 ISCA1Q9BUE6 129 aa26.81■■□□□ 1.88
SF3B2-207ENST00000529577 THSD7BQ9C0I4 1608 aa26.8■■□□□ 1.88
SF3B2-207ENST00000529577 TRAF5O00463 557 aa26.8■■□□□ 1.88
SF3B2-207ENST00000529577 CST9Q5W186 159 aa26.8■■□□□ 1.88
SF3B2-207ENST00000529577 NIM1KQ8IY84 436 aa26.8■■□□□ 1.88
SF3B2-207ENST00000529577 TRMT112Q9UI30 125 aaKnown RBP26.8■■□□□ 1.88
SF3B2-207ENST00000529577 WBP1LQ9NX94 342 aa26.79■■□□□ 1.88
SF3B2-207ENST00000529577 TRPM7Q96QT4 1865 aa26.79■■□□□ 1.88
SF3B2-207ENST00000529577 SHTN1A0MZ66 631 aa26.78■■□□□ 1.88
SF3B2-207ENST00000529577 YDJCA8MPS7 323 aa26.78■■□□□ 1.88
SF3B2-207ENST00000529577 GRAPQ13588 217 aa26.78■■□□□ 1.88
SF3B2-207ENST00000529577 HSP90AB3PQ58FF7 597 aa26.78■■□□□ 1.88
SF3B2-207ENST00000529577 GRAPLQ8TC17 118 aaPredicted RBP26.78■■□□□ 1.88
SF3B2-207ENST00000529577 GPRC5DQ9NZD1 345 aa26.78■■□□□ 1.88
SF3B2-207ENST00000529577 SH3TC1Q8TE82 1336 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms