RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 RTKN2Q8IZC4 609 aa8.26□□□□□ -1.09
CHRNA6-202ENST00000529467 SYNE4Q8N205 404 aa8.26□□□□□ -1.09
CHRNA6-202ENST00000529467 RTF1Q92541 710 aaKnown RBP8.26□□□□□ -1.09
CHRNA6-202ENST00000529467 CFAP53Q96M91 514 aa8.26□□□□□ -1.09
CHRNA6-202ENST00000529467 ZNF277Q9NRM2 450 aaPredicted RBP8.26□□□□□ -1.09
CHRNA6-202ENST00000529467 PLSCR2Q9NRY7 297 aa8.26□□□□□ -1.09
CHRNA6-202ENST00000529467 NUDCQ9Y266 331 aa8.26□□□□□ -1.09
CHRNA6-202ENST00000529467 ZNF541Q9H0D2 1346 aa8.26□□□□□ -1.09
CHRNA6-202ENST00000529467 NUP98P52948 1817 aa8.25□□□□□ -1.09
CHRNA6-202ENST00000529467 TMEM88BA6NKF7 163 aa8.25□□□□□ -1.09
CHRNA6-202ENST00000529467 FAM177BA6PVY3 158 aa8.25□□□□□ -1.09
CHRNA6-202ENST00000529467 GABBR2O75899 941 aa8.25□□□□□ -1.09
CHRNA6-202ENST00000529467 U2AF1L5P0DN76 240 aaPredicted RBP8.25□□□□□ -1.09
CHRNA6-202ENST00000529467 PPP2R1AP30153 589 aa8.25□□□□□ -1.09
CHRNA6-202ENST00000529467 VEGFBP49765 207 aa8.25□□□□□ -1.09
CHRNA6-202ENST00000529467 U2AF1Q01081 240 aaKnown RBP eCLIP8.25□□□□□ -1.09
CHRNA6-202ENST00000529467 TAF7Q15545 349 aaPredicted RBP8.25□□□□□ -1.09
CHRNA6-202ENST00000529467 PRDM10Q9NQV6 1147 aa8.25□□□□□ -1.09
CHRNA6-202ENST00000529467 HACL1Q9UJ83 578 aa8.25□□□□□ -1.09
CHRNA6-202ENST00000529467 EPHX2P34913 555 aa8.24□□□□□ -1.09
CHRNA6-202ENST00000529467 IARSP41252 1262 aaKnown RBP8.24□□□□□ -1.09
CHRNA6-202ENST00000529467 CRY2Q49AN0 593 aa8.24□□□□□ -1.09
CHRNA6-202ENST00000529467 EAPPQ56P03 285 aaPredicted RBP8.24□□□□□ -1.09
CHRNA6-202ENST00000529467 CNTROBQ8N137 903 aa8.24□□□□□ -1.09
CHRNA6-202ENST00000529467 WBP1LQ9NX94 342 aa8.24□□□□□ -1.09
CHRNA6-202ENST00000529467 MIS18AQ9NYP9 233 aa8.24□□□□□ -1.09
CHRNA6-202ENST00000529467 ADAMTSL1Q8N6G6 1762 aa8.24□□□□□ -1.09
CHRNA6-202ENST00000529467 SNED1Q8TER0 1413 aa8.23□□□□□ -1.09
CHRNA6-202ENST00000529467 ERVV-1B6SEH8 477 aa8.23□□□□□ -1.09
CHRNA6-202ENST00000529467 DEFB115Q30KQ5 88 aa8.23□□□□□ -1.09
CHRNA6-202ENST00000529467 MAP1SQ66K74 1059 aaPredicted RBP8.23□□□□□ -1.09
CHRNA6-202ENST00000529467 PNMA8AQ86V59 439 aaPredicted RBP8.23□□□□□ -1.09
CHRNA6-202ENST00000529467 GPC2Q8N158 579 aa8.23□□□□□ -1.09
CHRNA6-202ENST00000529467 PSMD1Q99460 953 aa8.23□□□□□ -1.09
CHRNA6-202ENST00000529467 FARP1Q9Y4F1 1045 aaPredicted RBP8.23□□□□□ -1.09
CHRNA6-202ENST00000529467 RNF123Q5XPI4 1314 aa8.23□□□□□ -1.09
CHRNA6-202ENST00000529467 DLG5Q8TDM6 1919 aa8.23□□□□□ -1.09
CHRNA6-202ENST00000529467 RASSF10A6NK89 507 aa8.22□□□□□ -1.09
CHRNA6-202ENST00000529467 GTF2E1P29083 439 aaPredicted RBP8.22□□□□□ -1.09
CHRNA6-202ENST00000529467 HOXA10P31260 410 aaPredicted RBP8.22□□□□□ -1.09
CHRNA6-202ENST00000529467 CTCFP49711 727 aaPredicted RBP8.22□□□□□ -1.09
CHRNA6-202ENST00000529467 CLCN6P51797 869 aa8.22□□□□□ -1.09
CHRNA6-202ENST00000529467 EIF4A1P60842 406 aaKnown RBP8.22□□□□□ -1.09
CHRNA6-202ENST00000529467 CC2D2BQ6DHV5 1058 aa8.22□□□□□ -1.09
CHRNA6-202ENST00000529467 TTLL7Q6ZT98 887 aa8.22□□□□□ -1.09
CHRNA6-202ENST00000529467 NUTM1Q86Y26 1132 aa8.22□□□□□ -1.09
CHRNA6-202ENST00000529467 NGEFQ8N5V2 710 aa8.22□□□□□ -1.09
CHRNA6-202ENST00000529467 NYXQ9GZU5 481 aa8.22□□□□□ -1.09
CHRNA6-202ENST00000529467 MAP3K15Q6ZN16 1313 aa8.22□□□□□ -1.09
CHRNA6-202ENST00000529467 LBX1P52954 281 aa8.21□□□□□ -1.1
CHRNA6-202ENST00000529467 SUSD4Q5VX71 490 aa8.21□□□□□ -1.1
CHRNA6-202ENST00000529467 ZNF34Q8IZ26 560 aa8.21□□□□□ -1.1
CHRNA6-202ENST00000529467 PNISRQ8TF01 805 aaKnown RBP8.21□□□□□ -1.1
CHRNA6-202ENST00000529467 JDP2Q8WYK2 163 aa8.21□□□□□ -1.1
CHRNA6-202ENST00000529467 RRP7AQ9Y3A4 280 aaKnown RBP8.21□□□□□ -1.1
CHRNA6-202ENST00000529467 ABCC12Q96J65 1359 aa8.21□□□□□ -1.1
CHRNA6-202ENST00000529467 COL4A5P29400 1685 aa8.21□□□□□ -1.1
CHRNA6-202ENST00000529467 LAMB4A4D0S4 1761 aa8.2□□□□□ -1.1
CHRNA6-202ENST00000529467 GPTP24298 496 aa8.2□□□□□ -1.1
CHRNA6-202ENST00000529467 EPS15P42566 896 aa8.2□□□□□ -1.1
CHRNA6-202ENST00000529467 SCNN1DP51172 638 aa8.2□□□□□ -1.1
CHRNA6-202ENST00000529467 EIF6P56537 245 aaKnown RBP8.2□□□□□ -1.1
CHRNA6-202ENST00000529467 FMR1Q06787 632 aaKnown RBP eCLIP8.2□□□□□ -1.1
CHRNA6-202ENST00000529467 GRIPAP1Q4V328 841 aa8.2□□□□□ -1.1
CHRNA6-202ENST00000529467 SLC51AQ86UW1 340 aa8.2□□□□□ -1.1
CHRNA6-202ENST00000529467 RPGRQ92834 1020 aaKnown RBP8.2□□□□□ -1.1
CHRNA6-202ENST00000529467 AIDAQ96BJ3 306 aa8.2□□□□□ -1.1
CHRNA6-202ENST00000529467 CRAMP1Q96RY5 1269 aa8.2□□□□□ -1.1
CHRNA6-202ENST00000529467 PLEKHF1Q96S99 279 aa8.2□□□□□ -1.1
CHRNA6-202ENST00000529467 DDX21Q9NR30 783 aaKnown RBP eCLIP8.2□□□□□ -1.1
CHRNA6-202ENST00000529467 GJA3Q9Y6H8 435 aa8.2□□□□□ -1.1
CHRNA6-202ENST00000529467 UBN2Q6ZU65 1347 aa8.2□□□□□ -1.1
CHRNA6-202ENST00000529467 WDR33Q9C0J8 1336 aaKnown RBP8.2□□□□□ -1.1
CHRNA6-202ENST00000529467 LTBP1Q14766 1721 aa8.2□□□□□ -1.1
CHRNA6-202ENST00000529467 KDM3BQ7LBC6 1761 aa8.2□□□□□ -1.1
CHRNA6-202ENST00000529467 RIC1Q4ADV7 1423 aa8.2□□□□□ -1.1
CHRNA6-202ENST00000529467 NTSR2O95665 410 aa8.19□□□□□ -1.1
CHRNA6-202ENST00000529467 HSPA8P11142 646 aaKnown RBP8.19□□□□□ -1.1
CHRNA6-202ENST00000529467 MYL6BP14649 208 aa8.19□□□□□ -1.1
CHRNA6-202ENST00000529467 MAP2K1Q02750 393 aaPredicted RBP8.19□□□□□ -1.1
CHRNA6-202ENST00000529467 GIGYF2Q6Y7W6 1299 aaKnown RBP8.19□□□□□ -1.1
CHRNA6-202ENST00000529467 C3orf67Q6ZVT6 689 aa8.19□□□□□ -1.1
CHRNA6-202ENST00000529467 USP50Q70EL3 339 aaPredicted RBP8.19□□□□□ -1.1
CHRNA6-202ENST00000529467 LARGE2Q8N3Y3 721 aa8.19□□□□□ -1.1
CHRNA6-202ENST00000529467 RBM17Q96I25 401 aaKnown RBP8.19□□□□□ -1.1
CHRNA6-202ENST00000529467 ZBTB3Q9H5J0 574 aa8.19□□□□□ -1.1
CHRNA6-202ENST00000529467 IBTKQ9P2D0 1353 aaPredicted RBP8.19□□□□□ -1.1
CHRNA6-202ENST00000529467 TRPM7Q96QT4 1865 aa8.19□□□□□ -1.1
CHRNA6-202ENST00000529467 TCERG1O14776 1098 aaKnown RBP8.18□□□□□ -1.1
CHRNA6-202ENST00000529467 CD44P16070 742 aaKnown RBP8.18□□□□□ -1.1
CHRNA6-202ENST00000529467 LMOD1P29536 600 aaPredicted RBP8.18□□□□□ -1.1
CHRNA6-202ENST00000529467 PDIA6Q15084 440 aa8.18□□□□□ -1.1
CHRNA6-202ENST00000529467 NFE2L2Q16236 605 aa8.18□□□□□ -1.1
CHRNA6-202ENST00000529467 SLC10A5Q5PT55 438 aa8.18□□□□□ -1.1
CHRNA6-202ENST00000529467 CST9Q5W186 159 aa8.18□□□□□ -1.1
CHRNA6-202ENST00000529467 KIF6Q6ZMV9 814 aa8.18□□□□□ -1.1
CHRNA6-202ENST00000529467 LRP10Q7Z4F1 713 aa8.18□□□□□ -1.1
CHRNA6-202ENST00000529467 THUMPD2Q9BTF0 503 aaKnown RBP8.18□□□□□ -1.1
CHRNA6-202ENST00000529467 VPS33BQ9H267 617 aa8.18□□□□□ -1.1
CHRNA6-202ENST00000529467 ABT1Q9ULW3 272 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms