RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 CFAP44Q96MT7 982 aa24.85■■□□□ 1.57
PKP3-204ENST00000526971 TTLL7Q6ZT98 887 aa24.84■■□□□ 1.57
PKP3-204ENST00000526971 SLC51AQ86UW1 340 aa24.84■■□□□ 1.57
PKP3-204ENST00000526971 NUTM1Q86Y26 1132 aa24.84■■□□□ 1.57
PKP3-204ENST00000526971 NGEFQ8N5V2 710 aa24.84■■□□□ 1.57
PKP3-204ENST00000526971 LTBP1Q14766 1721 aa24.83■■□□□ 1.57
PKP3-204ENST00000526971 CNTNAP1P78357 1384 aa24.83■■□□□ 1.57
PKP3-204ENST00000526971 CRY2Q49AN0 593 aa24.83■■□□□ 1.57
PKP3-204ENST00000526971 FAM9BQ8IZU0 186 aa24.83■■□□□ 1.57
PKP3-204ENST00000526971 ZNF853P0CG23 659 aa24.82■■□□□ 1.56
PKP3-204ENST00000526971 IARSP41252 1262 aaKnown RBP24.82■■□□□ 1.56
PKP3-204ENST00000526971 CCDC27Q2M243 656 aa24.82■■□□□ 1.56
PKP3-204ENST00000526971 NCBP3Q53F19 620 aaKnown RBP24.82■■□□□ 1.56
PKP3-204ENST00000526971 RTKN2Q8IZC4 609 aa24.82■■□□□ 1.56
PKP3-204ENST00000526971 MAP3K15Q6ZN16 1313 aa24.82■■□□□ 1.56
PKP3-204ENST00000526971 UBN2Q6ZU65 1347 aa24.82■■□□□ 1.56
PKP3-204ENST00000526971 SYNE4Q8N205 404 aa24.81■■□□□ 1.56
PKP3-204ENST00000526971 IFT57Q9NWB7 429 aa24.81■■□□□ 1.56
PKP3-204ENST00000526971 RIC1Q4ADV7 1423 aa24.8■■□□□ 1.56
PKP3-204ENST00000526971 FZD9O00144 591 aa24.8■■□□□ 1.56
PKP3-204ENST00000526971 ITGBL1O95965 494 aaPredicted RBP24.8■■□□□ 1.56
PKP3-204ENST00000526971 GTF2E1P29083 439 aaPredicted RBP24.8■■□□□ 1.56
PKP3-204ENST00000526971 GNAI1P63096 354 aa24.8■■□□□ 1.56
PKP3-204ENST00000526971 EAPPQ56P03 285 aaPredicted RBP24.8■■□□□ 1.56
PKP3-204ENST00000526971 MBIPQ9NS73 344 aa24.8■■□□□ 1.56
PKP3-204ENST00000526971 RNF123Q5XPI4 1314 aa24.8■■□□□ 1.56
PKP3-204ENST00000526971 ERVV-1B6SEH8 477 aa24.79■■□□□ 1.56
PKP3-204ENST00000526971 ALDH1B1P30837 517 aa24.79■■□□□ 1.56
PKP3-204ENST00000526971 HACL1Q9UJ83 578 aa24.79■■□□□ 1.56
PKP3-204ENST00000526971 IBTKQ9P2D0 1353 aaPredicted RBP24.79■■□□□ 1.56
PKP3-204ENST00000526971 GPTP24298 496 aa24.78■■□□□ 1.56
PKP3-204ENST00000526971 EPHX2P34913 555 aa24.78■■□□□ 1.56
PKP3-204ENST00000526971 KRT24Q2M2I5 525 aa24.78■■□□□ 1.56
PKP3-204ENST00000526971 WWC1Q8IX03 1113 aa24.78■■□□□ 1.56
PKP3-204ENST00000526971 ZBTB3Q9H5J0 574 aa24.78■■□□□ 1.56
PKP3-204ENST00000526971 ERBB4Q15303 1308 aa24.78■■□□□ 1.56
PKP3-204ENST00000526971 MYL6BP14649 208 aa24.77■■□□□ 1.56
PKP3-204ENST00000526971 EIF2S2P20042 333 aaKnown RBP24.77■■□□□ 1.56
PKP3-204ENST00000526971 PSMD1Q99460 953 aa24.77■■□□□ 1.56
PKP3-204ENST00000526971 NYXQ9GZU5 481 aa24.77■■□□□ 1.56
PKP3-204ENST00000526971 LAMB2P55268 1798 aa24.77■■□□□ 1.56
PKP3-204ENST00000526971 SUSD4Q5VX71 490 aa24.76■■□□□ 1.55
PKP3-204ENST00000526971 KIF6Q6ZMV9 814 aa24.76■■□□□ 1.55
PKP3-204ENST00000526971 C3orf67Q6ZVT6 689 aa24.76■■□□□ 1.55
PKP3-204ENST00000526971 ANKRD36CQ5JPF3 1778 aa24.75■■□□□ 1.55
PKP3-204ENST00000526971 CCER2I3L3R5 266 aa24.75■■□□□ 1.55
PKP3-204ENST00000526971 FOXN1O15353 648 aa24.75■■□□□ 1.55
PKP3-204ENST00000526971 TMEM88BA6NKF7 163 aa24.74■■□□□ 1.55
PKP3-204ENST00000526971 NTSR2O95665 410 aa24.74■■□□□ 1.55
PKP3-204ENST00000526971 HOXB7P09629 217 aa24.74■■□□□ 1.55
PKP3-204ENST00000526971 HOXA10P31260 410 aaPredicted RBP24.74■■□□□ 1.55
PKP3-204ENST00000526971 PDIA6Q15084 440 aa24.74■■□□□ 1.55
PKP3-204ENST00000526971 MAP1SQ66K74 1059 aaPredicted RBP24.74■■□□□ 1.55
PKP3-204ENST00000526971 VEGFBP49765 207 aa24.73■■□□□ 1.55
PKP3-204ENST00000526971 ZNF34Q8IZ26 560 aa24.73■■□□□ 1.55
PKP3-204ENST00000526971 GPC2Q8N158 579 aa24.73■■□□□ 1.55
PKP3-204ENST00000526971 CLEC11AQ9Y240 323 aa24.73■■□□□ 1.55
PKP3-204ENST00000526971 DUSP27Q5VZP5 1158 aa24.72■■□□□ 1.55
PKP3-204ENST00000526971 LRP10Q7Z4F1 713 aa24.72■■□□□ 1.55
PKP3-204ENST00000526971 RPGRQ92834 1020 aaKnown RBP24.72■■□□□ 1.55
PKP3-204ENST00000526971 SALL2Q9Y467 1007 aaPredicted RBP24.72■■□□□ 1.55
PKP3-204ENST00000526971 IL16Q14005 1332 aa24.71■■□□□ 1.55
PKP3-204ENST00000526971 DIEXFQ68CQ4 756 aaKnown RBP24.71■■□□□ 1.55
PKP3-204ENST00000526971 NECTIN2Q92692 538 aa24.71■■□□□ 1.55
PKP3-204ENST00000526971 CC2D2BQ6DHV5 1058 aa24.7■■□□□ 1.54
PKP3-204ENST00000526971 GIGYF2Q6Y7W6 1299 aaKnown RBP24.7■■□□□ 1.54
PKP3-204ENST00000526971 CNTROBQ8N137 903 aa24.7■■□□□ 1.54
PKP3-204ENST00000526971 JDP2Q8WYK2 163 aa24.7■■□□□ 1.54
PKP3-204ENST00000526971 TRPM7Q96QT4 1865 aa24.7■■□□□ 1.54
PKP3-204ENST00000526971 TAF1P21675 1872 aa24.69■■□□□ 1.54
PKP3-204ENST00000526971 PROSER3Q2NL68 480 aa24.69■■□□□ 1.54
PKP3-204ENST00000526971 HDGFL1Q5TGJ6 251 aa24.69■■□□□ 1.54
PKP3-204ENST00000526971 PNMA8AQ86V59 439 aaPredicted RBP24.69■■□□□ 1.54
PKP3-204ENST00000526971 WDR63Q8IWG1 891 aa24.69■■□□□ 1.54
PKP3-204ENST00000526971 GJA3Q9Y6H8 435 aa24.69■■□□□ 1.54
PKP3-204ENST00000526971 TCERG1O14776 1098 aaKnown RBP24.68■■□□□ 1.54
PKP3-204ENST00000526971 PPEF1O14829 653 aaPredicted RBP24.68■■□□□ 1.54
PKP3-204ENST00000526971 SCNN1DP51172 638 aa24.68■■□□□ 1.54
PKP3-204ENST00000526971 CRAMP1Q96RY5 1269 aa24.68■■□□□ 1.54
PKP3-204ENST00000526971 DDX21Q9NR30 783 aaKnown RBP eCLIP24.68■■□□□ 1.54
PKP3-204ENST00000526971 ANXA1P04083 346 aa24.67■■□□□ 1.54
PKP3-204ENST00000526971 C8orf58Q8NAV2 365 aa24.67■■□□□ 1.54
PKP3-204ENST00000526971 THSD7BQ9C0I4 1608 aa24.67■■□□□ 1.54
PKP3-204ENST00000526971 RASSF10A6NK89 507 aa24.66■■□□□ 1.54
PKP3-204ENST00000526971 EIF6P56537 245 aaKnown RBP24.66■■□□□ 1.54
PKP3-204ENST00000526971 FMR1Q06787 632 aaKnown RBP eCLIP24.66■■□□□ 1.541e-6■■■■□ 25.6
PKP3-204ENST00000526971 LARGE2Q8N3Y3 721 aa24.66■■□□□ 1.54
PKP3-204ENST00000526971 TSR2Q969E8 191 aaKnown RBP24.66■■□□□ 1.54
PKP3-204ENST00000526971 RBM17Q96I25 401 aaKnown RBP24.66■■□□□ 1.54
PKP3-204ENST00000526971 ELL2O00472 640 aaPredicted RBP24.65■■□□□ 1.54
PKP3-204ENST00000526971 EPS15P42566 896 aa24.65■■□□□ 1.54
PKP3-204ENST00000526971 CHPF2Q9P2E5 772 aa24.65■■□□□ 1.54
PKP3-204ENST00000526971 WBP1LQ9NX94 342 aa24.64■■□□□ 1.54
PKP3-204ENST00000526971 DBF4Q9UBU7 674 aaPredicted RBP24.64■■□□□ 1.54
PKP3-204ENST00000526971 PARP10Q53GL7 1025 aa24.63■■□□□ 1.53
PKP3-204ENST00000526971 COPS6Q7L5N1 327 aa24.63■■□□□ 1.53
PKP3-204ENST00000526971 PPP1R42Q7Z4L9 355 aa24.63■■□□□ 1.53
PKP3-204ENST00000526971 XAGE3Q8WTP9 111 aa24.63■■□□□ 1.53
PKP3-204ENST00000526971 PRDM10Q9NQV6 1147 aa24.63■■□□□ 1.53
PKP3-204ENST00000526971 ABCC4O15439 1325 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms