RNA–Protein interactions for RNA: ENST00000526545.5

AMBRA1-204, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 837 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-204ENST00000526545 NEUROD2Q15784 382 aa14.51□□□□□ -0.09
AMBRA1-204ENST00000526545 SYNE4Q8N205 404 aa14.51□□□□□ -0.09
AMBRA1-204ENST00000526545 RBM17Q96I25 401 aaKnown RBP14.51□□□□□ -0.09
AMBRA1-204ENST00000526545 CRAMP1Q96RY5 1269 aa14.51□□□□□ -0.09
AMBRA1-204ENST00000526545 ZNF277Q9NRM2 450 aaPredicted RBP14.51□□□□□ -0.09
AMBRA1-204ENST00000526545 CACNA1SQ13698 1873 aa14.5□□□□□ -0.09
AMBRA1-204ENST00000526545 RNF123Q5XPI4 1314 aa14.5□□□□□ -0.09
AMBRA1-204ENST00000526545 ANP32CO43423 234 aa14.5□□□□□ -0.09
AMBRA1-204ENST00000526545 IARSP41252 1262 aaKnown RBP14.5□□□□□ -0.09
AMBRA1-204ENST00000526545 HSP90AB3PQ58FF7 597 aa14.5□□□□□ -0.09
AMBRA1-204ENST00000526545 SLC10A5Q5PT55 438 aa14.5□□□□□ -0.09
AMBRA1-204ENST00000526545 CHADLQ6NUI6 762 aa14.5□□□□□ -0.09
AMBRA1-204ENST00000526545 CCDC146Q8IYE0 955 aa14.5□□□□□ -0.09
AMBRA1-204ENST00000526545 NLRP3Q96P20 1036 aa14.5□□□□□ -0.09
AMBRA1-204ENST00000526545 FZD9O00144 591 aa14.49□□□□□ -0.09
AMBRA1-204ENST00000526545 OLFM4Q6UX06 510 aa14.49□□□□□ -0.09
AMBRA1-204ENST00000526545 JDP2Q8WYK2 163 aa14.49□□□□□ -0.09
AMBRA1-204ENST00000526545 UTP14AQ9BVJ6 771 aaKnown RBP14.49□□□□□ -0.09
AMBRA1-204ENST00000526545 DDX21Q9NR30 783 aaKnown RBP eCLIP14.49□□□□□ -0.09
AMBRA1-204ENST00000526545 ADAMTS8Q9UP79 889 aa14.49□□□□□ -0.09
AMBRA1-204ENST00000526545 TRIM35Q9UPQ4 493 aa14.49□□□□□ -0.09
AMBRA1-204ENST00000526545 HOXB7P09629 217 aa14.48□□□□□ -0.09
AMBRA1-204ENST00000526545 PROSER3Q2NL68 480 aa14.48□□□□□ -0.09
AMBRA1-204ENST00000526545 COPS6Q7L5N1 327 aa14.48□□□□□ -0.09
AMBRA1-204ENST00000526545 TMX4Q9H1E5 349 aaPredicted RBP14.48□□□□□ -0.09
AMBRA1-204ENST00000526545 SNED1Q8TER0 1413 aa14.48□□□□□ -0.09
AMBRA1-204ENST00000526545 LDHDQ86WU2 507 aa14.47□□□□□ -0.09
AMBRA1-204ENST00000526545 GPC2Q8N158 579 aa14.47□□□□□ -0.09
AMBRA1-204ENST00000526545 VPS33BQ9H267 617 aa14.47□□□□□ -0.09
AMBRA1-204ENST00000526545 TAF1DQ9H5J8 278 aaPredicted RBP14.47□□□□□ -0.09
AMBRA1-204ENST00000526545 LAS1LQ9Y4W2 734 aaKnown RBP14.47□□□□□ -0.09
AMBRA1-204ENST00000526545 PPEF1O14829 653 aaPredicted RBP14.46□□□□□ -0.09
AMBRA1-204ENST00000526545 ANXA1P04083 346 aa14.46□□□□□ -0.09
AMBRA1-204ENST00000526545 AIMP1Q12904 312 aaKnown RBP14.46□□□□□ -0.09
AMBRA1-204ENST00000526545 TCIRG1Q13488 830 aa14.46□□□□□ -0.09
AMBRA1-204ENST00000526545 PNMA8AQ86V59 439 aaPredicted RBP14.46□□□□□ -0.09
AMBRA1-204ENST00000526545 XAGE3Q8WTP9 111 aa14.46□□□□□ -0.09
AMBRA1-204ENST00000526545 CFAP44Q96MT7 982 aa14.46□□□□□ -0.09
AMBRA1-204ENST00000526545 CREBZFQ9NS37 354 aa14.46□□□□□ -0.09
AMBRA1-204ENST00000526545 HACL1Q9UJ83 578 aa14.46□□□□□ -0.09
AMBRA1-204ENST00000526545 SCN4AP35499 1836 aa14.45□□□□□ -0.1
AMBRA1-204ENST00000526545 ZNF541Q9H0D2 1346 aa14.45□□□□□ -0.1
AMBRA1-204ENST00000526545 BBOX1O75936 387 aa14.45□□□□□ -0.1
AMBRA1-204ENST00000526545 NLRP10Q86W26 655 aa14.45□□□□□ -0.1
AMBRA1-204ENST00000526545 NECTIN2Q92692 538 aa14.45□□□□□ -0.1
AMBRA1-204ENST00000526545 DBF4Q9UBU7 674 aaPredicted RBP14.45□□□□□ -0.1
AMBRA1-204ENST00000526545 ATP6V0A2Q9Y487 856 aa14.45□□□□□ -0.1
AMBRA1-204ENST00000526545 POTEIP0CG38 1075 aa14.44□□□□□ -0.1
AMBRA1-204ENST00000526545 POTEJP0CG39 1038 aa14.44□□□□□ -0.1
AMBRA1-204ENST00000526545 EIF6P56537 245 aaKnown RBP14.44□□□□□ -0.1
AMBRA1-204ENST00000526545 CALD1Q05682 793 aaKnown RBP14.44□□□□□ -0.1
AMBRA1-204ENST00000526545 HDGFL1Q5TGJ6 251 aa14.44□□□□□ -0.1
AMBRA1-204ENST00000526545 C3orf67Q6ZVT6 689 aa14.44□□□□□ -0.1
AMBRA1-204ENST00000526545 PLBD2Q8NHP8 589 aa14.44□□□□□ -0.1
AMBRA1-204ENST00000526545 TRMT112Q9UI30 125 aaKnown RBP14.44□□□□□ -0.1
AMBRA1-204ENST00000526545 PCNTO95613 3336 aa14.44□□□□□ -0.1
AMBRA1-204ENST00000526545 EPHX2P34913 555 aa14.43□□□□□ -0.1
AMBRA1-204ENST00000526545 KRT24Q2M2I5 525 aa14.43□□□□□ -0.1
AMBRA1-204ENST00000526545 ANKRD13DQ6ZTN6 518 aa14.43□□□□□ -0.1
AMBRA1-204ENST00000526545 LARGE2Q8N3Y3 721 aa14.43□□□□□ -0.1
AMBRA1-204ENST00000526545 SUPT20HQ8NEM7 779 aa14.43□□□□□ -0.1
AMBRA1-204ENST00000526545 HYPKQ9NX55 129 aa14.43□□□□□ -0.1
AMBRA1-204ENST00000526545 CHPF2Q9P2E5 772 aa14.43□□□□□ -0.1
AMBRA1-204ENST00000526545 SH3TC1Q8TE82 1336 aa14.42□□□□□ -0.1
AMBRA1-204ENST00000526545 PASKQ96RG2 1323 aa14.42□□□□□ -0.1
AMBRA1-204ENST00000526545 DDX46Q7L014 1031 aaKnown RBP14.42□□□□□ -0.1
AMBRA1-204ENST00000526545 TCERG1O14776 1098 aaKnown RBP14.41□□□□□ -0.1
AMBRA1-204ENST00000526545 ITGBL1O95965 494 aaPredicted RBP14.41□□□□□ -0.1
AMBRA1-204ENST00000526545 ZNF853P0CG23 659 aa14.41□□□□□ -0.1
AMBRA1-204ENST00000526545 HCLS1P14317 486 aaPredicted RBP14.41□□□□□ -0.1
AMBRA1-204ENST00000526545 EAPPQ56P03 285 aaPredicted RBP14.41□□□□□ -0.1
AMBRA1-204ENST00000526545 DUSP27Q5VZP5 1158 aa14.41□□□□□ -0.1
AMBRA1-204ENST00000526545 TMC4Q7Z404 712 aa14.41□□□□□ -0.1
AMBRA1-204ENST00000526545 SP8Q8IXZ3 490 aa14.41□□□□□ -0.1
AMBRA1-204ENST00000526545 RTFDC1Q9BY42 306 aaPredicted RBP14.41□□□□□ -0.1
AMBRA1-204ENST00000526545 CHMP4AQ9BY43 222 aa14.41□□□□□ -0.1
AMBRA1-204ENST00000526545 CLEC11AQ9Y240 323 aa14.41□□□□□ -0.1
AMBRA1-204ENST00000526545 ABCC4O15439 1325 aa14.41□□□□□ -0.1
AMBRA1-204ENST00000526545 APAF1O14727 1248 aa14.4□□□□□ -0.1
AMBRA1-204ENST00000526545 LMOD1P29536 600 aaPredicted RBP14.4□□□□□ -0.1
AMBRA1-204ENST00000526545 GNAI1P63096 354 aa14.4□□□□□ -0.1
AMBRA1-204ENST00000526545 TRIM28Q13263 835 aaKnown RBP14.4□□□□□ -0.1
AMBRA1-204ENST00000526545 NIM1KQ8IY84 436 aa14.4□□□□□ -0.1
AMBRA1-204ENST00000526545 MBIPQ9NS73 344 aa14.4□□□□□ -0.1
AMBRA1-204ENST00000526545 IFT57Q9NWB7 429 aa14.4□□□□□ -0.1
AMBRA1-204ENST00000526545 GJA3Q9Y6H8 435 aa14.4□□□□□ -0.1
AMBRA1-204ENST00000526545 ANKRD36CQ5JPF3 1778 aa14.39□□□□□ -0.11
AMBRA1-204ENST00000526545 TMEM88BA6NKF7 163 aa14.39□□□□□ -0.11
AMBRA1-204ENST00000526545 PPIP5K2O43314 1243 aa14.39□□□□□ -0.11
AMBRA1-204ENST00000526545 GRAPQ13588 217 aa14.39□□□□□ -0.11
AMBRA1-204ENST00000526545 DPP8Q6V1X1 898 aaPredicted RBP14.39□□□□□ -0.11
AMBRA1-204ENST00000526545 GRAPLQ8TC17 118 aaPredicted RBP14.39□□□□□ -0.11
AMBRA1-204ENST00000526545 ISCA1Q9BUE6 129 aa14.39□□□□□ -0.11
AMBRA1-204ENST00000526545 CNTROBQ8N137 903 aa14.38□□□□□ -0.11
AMBRA1-204ENST00000526545 MPNDQ8N594 471 aa14.38□□□□□ -0.11
AMBRA1-204ENST00000526545 ZNRF3Q9ULT6 936 aa14.38□□□□□ -0.11
AMBRA1-204ENST00000526545 COL4A5P29400 1685 aa14.38□□□□□ -0.11
AMBRA1-204ENST00000526545 ADAMTSL1Q8N6G6 1762 aa14.37□□□□□ -0.11
AMBRA1-204ENST00000526545 HSP90B1P14625 803 aaKnown RBP14.37□□□□□ -0.11
AMBRA1-204ENST00000526545 SCNN1DP51172 638 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms