RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 ATP5J2-PTCD1G3V325 749 aa26.37■■□□□ 1.81
CD44-222ENST00000526025 BCAR3O75815 825 aa26.37■■□□□ 1.81
CD44-222ENST00000526025 IGKV5-2P06315 115 aa26.37■■□□□ 1.81
CD44-222ENST00000526025 FHDC1Q9C0D6 1143 aaPredicted RBP26.37■■□□□ 1.81
CD44-222ENST00000526025 CWC25Q9NXE8 425 aaPredicted RBP26.37■■□□□ 1.81
CD44-222ENST00000526025 F6X3S4 739 aa26.36■■□□□ 1.81
CD44-222ENST00000526025 BRIP1Q9BX63 1249 aa26.36■■□□□ 1.81
CD44-222ENST00000526025 RCAN3Q9UKA8 241 aa26.36■■□□□ 1.81
CD44-222ENST00000526025 PDZRN3Q9UPQ7 1066 aa26.36■■□□□ 1.81
CD44-222ENST00000526025 NEURL1BA8MQ27 555 aa26.35■■□□□ 1.81
CD44-222ENST00000526025 NPHP1O15259 732 aa26.35■■□□□ 1.81
CD44-222ENST00000526025 TGFB2P61812 414 aa26.35■■□□□ 1.81
CD44-222ENST00000526025 BEND3Q5T5X7 828 aa26.35■■□□□ 1.81
CD44-222ENST00000526025 BRCA1P38398 1863 aaKnown RBP26.34■■□□□ 1.81
CD44-222ENST00000526025 DDX60Q8IY21 1712 aaKnown RBP26.34■■□□□ 1.81
CD44-222ENST00000526025 SH3TC1Q8TE82 1336 aa26.34■■□□□ 1.81
CD44-222ENST00000526025 ALDH1L1O75891 902 aa26.33■■□□□ 1.81
CD44-222ENST00000526025 GTF2E1P29083 439 aaPredicted RBP26.33■■□□□ 1.81
CD44-222ENST00000526025 SLC10A5Q5PT55 438 aa26.33■■□□□ 1.81
CD44-222ENST00000526025 SYT17Q9BSW7 474 aa26.33■■□□□ 1.81
CD44-222ENST00000526025 TRMT112Q9UI30 125 aaKnown RBP26.33■■□□□ 1.81
CD44-222ENST00000526025 TNRC6CQ9HCJ0 1690 aaKnown RBP26.32■■□□□ 1.8
CD44-222ENST00000526025 PCCAP05165 728 aaPredicted RBP26.32■■□□□ 1.8
CD44-222ENST00000526025 PDE6BP35913 854 aa26.32■■□□□ 1.8
CD44-222ENST00000526025 ATF7IPQ6VMQ6 1270 aa26.32■■□□□ 1.8
CD44-222ENST00000526025 ZBTB38Q8NAP3 1195 aaPredicted RBP26.32■■□□□ 1.8
CD44-222ENST00000526025 ABCC12Q96J65 1359 aa26.32■■□□□ 1.8
CD44-222ENST00000526025 COL11A2P13942 1736 aaPredicted RBP26.31■■□□□ 1.8
CD44-222ENST00000526025 KLRG2A4D1S0 409 aaPredicted RBP26.31■■□□□ 1.8
CD44-222ENST00000526025 FAM177BA6PVY3 158 aa26.31■■□□□ 1.8
CD44-222ENST00000526025 GCKRQ14397 625 aa26.31■■□□□ 1.8
CD44-222ENST00000526025 CWF19L2Q2TBE0 894 aaKnown RBP26.31■■□□□ 1.8
CD44-222ENST00000526025 ERFEQ4G0M1 354 aa26.31■■□□□ 1.8
CD44-222ENST00000526025 ZKSCAN2Q63HK3 967 aa26.31■■□□□ 1.8
CD44-222ENST00000526025 SRCIN1Q9C0H9 1055 aa26.31■■□□□ 1.8
CD44-222ENST00000526025 MYH3P11055 1940 aa26.3■■□□□ 1.8
CD44-222ENST00000526025 HSP90B1P14625 803 aaKnown RBP26.3■■□□□ 1.8
CD44-222ENST00000526025 NUTM1Q86Y26 1132 aa26.3■■□□□ 1.8
CD44-222ENST00000526025 ABCC4O15439 1325 aa26.3■■□□□ 1.8
CD44-222ENST00000526025 TRIM27P14373 513 aa26.29■■□□□ 1.8
CD44-222ENST00000526025 CCT4P50991 539 aaKnown RBP26.29■■□□□ 1.8
CD44-222ENST00000526025 SLC4A10Q6U841 1118 aa26.29■■□□□ 1.8
CD44-222ENST00000526025 CDHR2Q9BYE9 1310 aa26.29■■□□□ 1.8
CD44-222ENST00000526025 KLHL34Q8N239 644 aa26.28■■□□□ 1.8
CD44-222ENST00000526025 FRAT1Q92837 279 aaPredicted RBP26.27■■□□□ 1.8
CD44-222ENST00000526025 H7C1W4 665 aa26.26■■□□□ 1.79
CD44-222ENST00000526025 CRY2Q49AN0 593 aa26.26■■□□□ 1.79
CD44-222ENST00000526025 FAM89AQ96GI7 184 aa26.26■■□□□ 1.79
CD44-222ENST00000526025 INTS3Q68E01 1043 aaKnown RBP26.25■■□□□ 1.79
CD44-222ENST00000526025 CCDC24Q8N4L8 307 aa26.25■■□□□ 1.79
CD44-222ENST00000526025 NLGN2Q8NFZ4 835 aa26.25■■□□□ 1.79
CD44-222ENST00000526025 H0YIN7 160 aa26.24■■□□□ 1.79
CD44-222ENST00000526025 NLRP3Q96P20 1036 aa26.24■■□□□ 1.79
CD44-222ENST00000526025 UTYO14607 1347 aa26.23■■□□□ 1.79
CD44-222ENST00000526025 GRM8O00222 908 aa26.23■■□□□ 1.79
CD44-222ENST00000526025 IRS4O14654 1257 aaPredicted RBP26.23■■□□□ 1.79
CD44-222ENST00000526025 MS4A1P11836 297 aa26.23■■□□□ 1.79
CD44-222ENST00000526025 DPEP1P16444 411 aa26.23■■□□□ 1.79
CD44-222ENST00000526025 C2CD5Q86YS7 1000 aa26.23■■□□□ 1.79
CD44-222ENST00000526025 ARFGEF1Q9Y6D6 1849 aa26.23■■□□□ 1.79
CD44-222ENST00000526025 SRGNP10124 158 aa26.22■■□□□ 1.79
CD44-222ENST00000526025 CASP7P55210 303 aa26.22■■□□□ 1.79
CD44-222ENST00000526025 STYK1Q6J9G0 422 aa26.22■■□□□ 1.79
CD44-222ENST00000526025 SYNE4Q8N205 404 aa26.22■■□□□ 1.79
CD44-222ENST00000526025 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.22■■□□□ 1.79
CD44-222ENST00000526025 PLA2G12BQ9BX93 195 aa26.22■■□□□ 1.79
CD44-222ENST00000526025 KCNA3P22001 575 aa26.21■■□□□ 1.79
CD44-222ENST00000526025 UBE3BQ7Z3V4 1068 aa26.21■■□□□ 1.79
CD44-222ENST00000526025 MASTLQ96GX5 879 aa26.21■■□□□ 1.79
CD44-222ENST00000526025 A0A0G2JLW4 131 aa26.2■■□□□ 1.78
CD44-222ENST00000526025 PDE8AO60658 829 aa26.2■■□□□ 1.78
CD44-222ENST00000526025 HCLS1P14317 486 aaPredicted RBP26.2■■□□□ 1.78
CD44-222ENST00000526025 NPR1P16066 1061 aa26.2■■□□□ 1.78
CD44-222ENST00000526025 HOXA10P31260 410 aaPredicted RBP26.2■■□□□ 1.78
CD44-222ENST00000526025 DZIP1LQ8IYY4 767 aaKnown RBP26.2■■□□□ 1.78
CD44-222ENST00000526025 C9orf78Q9NZ63 289 aaPredicted RBP26.2■■□□□ 1.78
CD44-222ENST00000526025 CHRNA5P30532 468 aa26.19■■□□□ 1.78
CD44-222ENST00000526025 SF3B3Q15393 1217 aaKnown RBP26.19■■□□□ 1.78
CD44-222ENST00000526025 FTSJ3Q8IY81 847 aaKnown RBP26.19■■□□□ 1.78
CD44-222ENST00000526025 PIM2Q9P1W9 311 aa26.19■■□□□ 1.78
CD44-222ENST00000526025 CACNA1SQ13698 1873 aa26.19■■□□□ 1.78
CD44-222ENST00000526025 RTL5Q5HYW3 569 aaPredicted RBP26.17■■□□□ 1.78
CD44-222ENST00000526025 C3orf67Q6ZVT6 689 aa26.17■■□□□ 1.78
CD44-222ENST00000526025 CNKSR1Q969H4 720 aa26.17■■□□□ 1.78
CD44-222ENST00000526025 USP44Q9H0E7 712 aa26.17■■□□□ 1.78
CD44-222ENST00000526025 CLUAP1Q96AJ1 413 aa26.16■■□□□ 1.78
CD44-222ENST00000526025 CRAMP1Q96RY5 1269 aa26.16■■□□□ 1.78
CD44-222ENST00000526025 TNNQ9UQP3 1299 aa26.16■■□□□ 1.78
CD44-222ENST00000526025 RPGRQ92834 1020 aaKnown RBP26.15■■□□□ 1.78
CD44-222ENST00000526025 RBM17Q96I25 401 aaKnown RBP26.15■■□□□ 1.78
CD44-222ENST00000526025 HDAC5Q9UQL6 1122 aa26.15■■□□□ 1.78
CD44-222ENST00000526025 RTL9Q8NET4 1388 aa26.15■■□□□ 1.78
CD44-222ENST00000526025 SLX4Q8IY92 1834 aa26.14■■□□□ 1.78
CD44-222ENST00000526025 NBPF7P0C2Y1 421 aaPredicted RBP26.14■■□□□ 1.78
CD44-222ENST00000526025 ALDH1B1P30837 517 aa26.14■■□□□ 1.78
CD44-222ENST00000526025 CTSWP56202 376 aa26.14■■□□□ 1.78
CD44-222ENST00000526025 PDE3AQ14432 1141 aa26.14■■□□□ 1.78
CD44-222ENST00000526025 TMEM57Q8N5G2 664 aa26.14■■□□□ 1.78
CD44-222ENST00000526025 TTLL6Q8N841 843 aa26.14■■□□□ 1.78
CD44-222ENST00000526025 JARID2Q92833 1246 aaPredicted RBP26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms