RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 STAG2Q8N3U4 1231 aa8.08□□□□□ -1.12
CSDE1-211ENST00000525970 NACC1Q96RE7 527 aa8.08□□□□□ -1.12
CSDE1-211ENST00000525970 EFCC1Q9HA90 598 aa8.08□□□□□ -1.12
CSDE1-211ENST00000525970 MKRN1Q9UHC7 482 aaKnown RBP8.08□□□□□ -1.12
CSDE1-211ENST00000525970 STARD13Q9Y3M8 1113 aa8.08□□□□□ -1.12
CSDE1-211ENST00000525970 RFX1P22670 979 aa8.07□□□□□ -1.12
CSDE1-211ENST00000525970 TYRO3Q06418 890 aa8.07□□□□□ -1.12
CSDE1-211ENST00000525970 RETREG2Q8NC44 543 aa8.07□□□□□ -1.12
CSDE1-211ENST00000525970 GAS2L2Q8NHY3 880 aa8.07□□□□□ -1.12
CSDE1-211ENST00000525970 HSH2DQ96JZ2 352 aa8.07□□□□□ -1.12
CSDE1-211ENST00000525970 SEMA6BQ9H3T3 888 aa8.07□□□□□ -1.12
CSDE1-211ENST00000525970 HCN4Q9Y3Q4 1203 aa8.07□□□□□ -1.12
CSDE1-211ENST00000525970 CCDC9Q9Y3X0 531 aaKnown RBP8.07□□□□□ -1.12
CSDE1-211ENST00000525970 SFI1A8K8P3 1242 aa8.06□□□□□ -1.12
CSDE1-211ENST00000525970 PPP1R12BO60237 982 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-211ENST00000525970 PPP1R15AO75807 674 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-211ENST00000525970 ALBP02768 609 aa8.06□□□□□ -1.12
CSDE1-211ENST00000525970 TRIM28Q13263 835 aaKnown RBP8.06□□□□□ -1.12
CSDE1-211ENST00000525970 SUSD3Q96L08 255 aa8.06□□□□□ -1.12
CSDE1-211ENST00000525970 NID1P14543 1247 aa8.05□□□□□ -1.12
CSDE1-211ENST00000525970 ITGB7P26010 798 aa8.05□□□□□ -1.12
CSDE1-211ENST00000525970 C20orf204Q6ZNR8 217 aa8.05□□□□□ -1.12
CSDE1-211ENST00000525970 TSEN2Q8NCE0 465 aaKnown RBP8.05□□□□□ -1.12
CSDE1-211ENST00000525970 C21orf2O43822 256 aa8.04□□□□□ -1.12
CSDE1-211ENST00000525970 DKK1O94907 266 aa8.04□□□□□ -1.12
CSDE1-211ENST00000525970 CFAP70Q5T0N1 1121 aa8.04□□□□□ -1.12
CSDE1-211ENST00000525970 ZNF280CQ8ND82 737 aa8.04□□□□□ -1.12
CSDE1-211ENST00000525970 VRTNQ9H8Y1 702 aa8.04□□□□□ -1.12
CSDE1-211ENST00000525970 ATAD2Q6PL18 1390 aa8.03□□□□□ -1.12
CSDE1-211ENST00000525970 RASA1P20936 1047 aa8.03□□□□□ -1.12
CSDE1-211ENST00000525970 RSPO4Q2I0M5 234 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-211ENST00000525970 IER5Q5VY09 327 aa8.03□□□□□ -1.12
CSDE1-211ENST00000525970 LARP1Q6PKG0 1096 aaKnown RBP8.03□□□□□ -1.12
CSDE1-211ENST00000525970 ALDH16A1Q8IZ83 802 aa8.03□□□□□ -1.12
CSDE1-211ENST00000525970 ZNF594Q96JF6 807 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-211ENST00000525970 C2orf49Q9BVC5 232 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-211ENST00000525970 LILRB5O75023 590 aa8.02□□□□□ -1.13
CSDE1-211ENST00000525970 SEC13P55735 322 aa8.02□□□□□ -1.13
CSDE1-211ENST00000525970 CDCA8Q53HL2 280 aa8.02□□□□□ -1.13
CSDE1-211ENST00000525970 NKAPLQ5M9Q1 402 aa8.02□□□□□ -1.13
CSDE1-211ENST00000525970 BTLAQ7Z6A9 289 aa8.02□□□□□ -1.13
CSDE1-211ENST00000525970 RAB44Q7Z6P3 723 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-211ENST00000525970 C8orf86Q6ZUL3 223 aa8.01□□□□□ -1.13
CSDE1-211ENST00000525970 BHMTQ93088 406 aa8.01□□□□□ -1.13
CSDE1-211ENST00000525970 TPSG1Q9NRR2 321 aa8.01□□□□□ -1.13
CSDE1-211ENST00000525970 C9orf172C9J069 976 aa8□□□□□ -1.13
CSDE1-211ENST00000525970 FAM229AH3BQW9 127 aa8□□□□□ -1.13
CSDE1-211ENST00000525970 SRPK2P78362 688 aaKnown RBP8□□□□□ -1.13
CSDE1-211ENST00000525970 ZMYM1Q5SVZ6 1142 aa8□□□□□ -1.13
CSDE1-211ENST00000525970 KANK4Q5T7N3 995 aaPredicted RBP8□□□□□ -1.13
CSDE1-211ENST00000525970 SCG3Q8WXD2 468 aaKnown RBP8□□□□□ -1.13
CSDE1-211ENST00000525970 UBE2OQ9C0C9 1292 aaKnown RBP8□□□□□ -1.13
CSDE1-211ENST00000525970 SLC6A14Q9UN76 642 aa8□□□□□ -1.13
CSDE1-211ENST00000525970 RTN1Q16799 776 aa7.99□□□□□ -1.13
CSDE1-211ENST00000525970 TRAPPC3LQ5T215 181 aa7.99□□□□□ -1.13
CSDE1-211ENST00000525970 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-211ENST00000525970 TGFBR3LH3BV60 316 aa7.98□□□□□ -1.13
CSDE1-211ENST00000525970 ELNP15502 786 aa7.98□□□□□ -1.13
CSDE1-211ENST00000525970 CRTC2Q53ET0 693 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-211ENST00000525970 A0A0A0MRY4 1105 aa7.97□□□□□ -1.13
CSDE1-211ENST00000525970 DYRK3O43781 588 aa7.97□□□□□ -1.13
CSDE1-211ENST00000525970 RAC1P63000 192 aa7.97□□□□□ -1.13
CSDE1-211ENST00000525970 GRIK4Q16099 956 aa7.97□□□□□ -1.13
CSDE1-211ENST00000525970 GSX2Q9BZM3 304 aa7.97□□□□□ -1.13
CSDE1-211ENST00000525970 USP17L15C9J2P7 530 aa7.96□□□□□ -1.14
CSDE1-211ENST00000525970 USP17L10C9JJH3 530 aa7.96□□□□□ -1.14
CSDE1-211ENST00000525970 USP17L13C9JLJ4 530 aa7.96□□□□□ -1.14
CSDE1-211ENST00000525970 USP17L12C9JPN9 530 aa7.96□□□□□ -1.14
CSDE1-211ENST00000525970 USP17L11C9JVI0 530 aa7.96□□□□□ -1.14
CSDE1-211ENST00000525970 USP17L21D6R901 530 aa7.96□□□□□ -1.14
CSDE1-211ENST00000525970 USP17L18D6R9N7 530 aa7.96□□□□□ -1.14
CSDE1-211ENST00000525970 USP17L22D6RA61 530 aa7.96□□□□□ -1.14
CSDE1-211ENST00000525970 USP17L17D6RBQ6 530 aa7.96□□□□□ -1.14
CSDE1-211ENST00000525970 USP17L19D6RCP7 530 aa7.96□□□□□ -1.14
CSDE1-211ENST00000525970 USP17L20D6RJB6 530 aa7.96□□□□□ -1.14
CSDE1-211ENST00000525970 EPB42P16452 691 aa7.96□□□□□ -1.14
CSDE1-211ENST00000525970 IGFBP4P22692 258 aa7.96□□□□□ -1.14
CSDE1-211ENST00000525970 NRG1Q02297 640 aaPredicted RBP7.96□□□□□ -1.14
CSDE1-211ENST00000525970 TBC1D8BQ0IIM8 1120 aa7.96□□□□□ -1.14
CSDE1-211ENST00000525970 USP17L24Q0WX57 530 aa7.96□□□□□ -1.14
CSDE1-211ENST00000525970 PTK7Q13308 1070 aa7.96□□□□□ -1.14
CSDE1-211ENST00000525970 CCINQ13939 588 aa7.96□□□□□ -1.14
CSDE1-211ENST00000525970 ADGRE1Q14246 886 aa7.96□□□□□ -1.14
CSDE1-211ENST00000525970 PCSK7Q16549 785 aa7.96□□□□□ -1.14
CSDE1-211ENST00000525970 AEBP1Q8IUX7 1158 aa7.96□□□□□ -1.14
CSDE1-211ENST00000525970 CHMP7Q8WUX9 453 aaPredicted RBP7.96□□□□□ -1.14
CSDE1-211ENST00000525970 NGLY1Q96IV0 654 aa7.96□□□□□ -1.14
CSDE1-211ENST00000525970 PNMA5Q96PV4 448 aa7.96□□□□□ -1.14
CSDE1-211ENST00000525970 C11orf16Q9NQ32 467 aa7.96□□□□□ -1.14
CSDE1-211ENST00000525970 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.96□□□□□ -1.14
CSDE1-211ENST00000525970 FAM196BA6NMK8 535 aa7.95□□□□□ -1.14
CSDE1-211ENST00000525970 H2AFB1P0C5Y9 115 aa7.95□□□□□ -1.14
CSDE1-211ENST00000525970 H2AFB2P0C5Z0 115 aa7.95□□□□□ -1.14
CSDE1-211ENST00000525970 DPYDQ12882 1025 aa7.95□□□□□ -1.14
CSDE1-211ENST00000525970 MBTPS1Q14703 1052 aa7.95□□□□□ -1.14
CSDE1-211ENST00000525970 ANKMY2Q8IV38 441 aa7.95□□□□□ -1.14
CSDE1-211ENST00000525970 PBXIP1Q96AQ6 731 aa7.95□□□□□ -1.14
CSDE1-211ENST00000525970 LENG1Q96BZ8 264 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-211ENST00000525970 JPH1Q9HDC5 661 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-211ENST00000525970 DNAJB12Q9NXW2 375 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms