RNA–Protein interactions for RNA: ENST00000525947.1

ROM1-203, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene ROM1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-203ENST00000525947 FKBP4Q02790 459 aaKnown RBP eCLIP31.92■■■□□ 2.7
ROM1-203ENST00000525947 FSTL1Q12841 308 aa31.92■■■□□ 2.7
ROM1-203ENST00000525947 DDX21Q9NR30 783 aaKnown RBP eCLIP31.92■■■□□ 2.7
ROM1-203ENST00000525947 CHPF2Q9P2E5 772 aa31.92■■■□□ 2.7
ROM1-203ENST00000525947 CCDC184Q52MB2 194 aa31.91■■■□□ 2.7
ROM1-203ENST00000525947 PARP10Q53GL7 1025 aa31.91■■■□□ 2.7
ROM1-203ENST00000525947 HDGFL1Q5TGJ6 251 aa31.91■■■□□ 2.7
ROM1-203ENST00000525947 C3orf67Q6ZVT6 689 aa31.91■■■□□ 2.7
ROM1-203ENST00000525947 CFAP44Q96MT7 982 aa31.91■■■□□ 2.7
ROM1-203ENST00000525947 RIC1Q4ADV7 1423 aa31.91■■■□□ 2.7
ROM1-203ENST00000525947 DDX60Q8IY21 1712 aaKnown RBP31.9■■■□□ 2.7
ROM1-203ENST00000525947 DDNO94850 711 aaPredicted RBP31.9■■■□□ 2.7
ROM1-203ENST00000525947 HTRA3P83110 453 aa31.9■■■□□ 2.7
ROM1-203ENST00000525947 ZNF428Q96B54 188 aa31.9■■■□□ 2.7
ROM1-203ENST00000525947 UTP14AQ9BVJ6 771 aaKnown RBP31.9■■■□□ 2.7
ROM1-203ENST00000525947 MBIPQ9NS73 344 aa31.9■■■□□ 2.7
ROM1-203ENST00000525947 TCERG1O14776 1098 aaKnown RBP31.89■■■□□ 2.7
ROM1-203ENST00000525947 ZEB1P37275 1124 aaPredicted RBP31.89■■■□□ 2.7
ROM1-203ENST00000525947 RTKN2Q8IZC4 609 aa31.89■■■□□ 2.7
ROM1-203ENST00000525947 SMC1BQ8NDV3 1235 aa31.89■■■□□ 2.7
ROM1-203ENST00000525947 DUSP27Q5VZP5 1158 aa31.87■■■□□ 2.69
ROM1-203ENST00000525947 SLC51AQ86UW1 340 aa31.87■■■□□ 2.69
ROM1-203ENST00000525947 SYNE4Q8N205 404 aa31.87■■■□□ 2.69
ROM1-203ENST00000525947 HOXA10P31260 410 aaPredicted RBP31.86■■■□□ 2.69
ROM1-203ENST00000525947 HSP90AB3PQ58FF7 597 aa31.86■■■□□ 2.69
ROM1-203ENST00000525947 RBM17Q96I25 401 aaKnown RBP31.86■■■□□ 2.69
ROM1-203ENST00000525947 NLRP3Q96P20 1036 aa31.86■■■□□ 2.69
ROM1-203ENST00000525947 TCIRG1Q13488 830 aa31.85■■■□□ 2.69
ROM1-203ENST00000525947 NLRP10Q86W26 655 aa31.84■■■□□ 2.69
ROM1-203ENST00000525947 HOXB7P09629 217 aa31.83■■■□□ 2.69
ROM1-203ENST00000525947 ZNF853P0CG23 659 aa31.83■■■□□ 2.69
ROM1-203ENST00000525947 IARSP41252 1262 aaKnown RBP31.83■■■□□ 2.69
ROM1-203ENST00000525947 CRAMP1Q96RY5 1269 aa31.83■■■□□ 2.69
ROM1-203ENST00000525947 DBF4Q9UBU7 674 aaPredicted RBP31.83■■■□□ 2.69
ROM1-203ENST00000525947 SNED1Q8TER0 1413 aa31.83■■■□□ 2.69
ROM1-203ENST00000525947 ELL2O00472 640 aaPredicted RBP31.82■■■□□ 2.68
ROM1-203ENST00000525947 DNAJC5GQ8N7S2 189 aa31.82■■■□□ 2.68
ROM1-203ENST00000525947 ZNF541Q9H0D2 1346 aa31.81■■■□□ 2.68
ROM1-203ENST00000525947 PPEF1O14829 653 aaPredicted RBP31.81■■■□□ 2.68
ROM1-203ENST00000525947 HCLS1P14317 486 aaPredicted RBP31.81■■■□□ 2.68
ROM1-203ENST00000525947 GNAI1P63096 354 aa31.81■■■□□ 2.68
ROM1-203ENST00000525947 SLC10A5Q5PT55 438 aa31.81■■■□□ 2.68
ROM1-203ENST00000525947 TRMT112Q9UI30 125 aaKnown RBP31.81■■■□□ 2.68
ROM1-203ENST00000525947 IFT57Q9NWB7 429 aa31.8■■■□□ 2.68
ROM1-203ENST00000525947 ANKRD13DQ6ZTN6 518 aa31.79■■■□□ 2.68
ROM1-203ENST00000525947 PLBD2Q8NHP8 589 aa31.79■■■□□ 2.68
ROM1-203ENST00000525947 COL4A5P29400 1685 aa31.79■■■□□ 2.68
ROM1-203ENST00000525947 CALD1Q05682 793 aaKnown RBP31.78■■■□□ 2.68
ROM1-203ENST00000525947 CC2D2BQ6DHV5 1058 aa31.78■■■□□ 2.68
ROM1-203ENST00000525947 PSMD1Q99460 953 aa31.78■■■□□ 2.68
ROM1-203ENST00000525947 HYPKQ9NX55 129 aa31.77■■■□□ 2.68
ROM1-203ENST00000525947 ABCC4O15439 1325 aa31.76■■■□□ 2.68
ROM1-203ENST00000525947 ATP5J2-PTCD1G3V325 749 aa31.76■■■□□ 2.67
ROM1-203ENST00000525947 POTEIP0CG38 1075 aa31.76■■■□□ 2.67
ROM1-203ENST00000525947 POTEJP0CG39 1038 aa31.76■■■□□ 2.67
ROM1-203ENST00000525947 RNF123Q5XPI4 1314 aa31.75■■■□□ 2.67
ROM1-203ENST00000525947 SH3TC1Q8TE82 1336 aa31.75■■■□□ 2.67
ROM1-203ENST00000525947 ZNF316A6NFI3 1004 aaPredicted RBP31.75■■■□□ 2.67
ROM1-203ENST00000525947 C8orf58Q8NAV2 365 aa31.74■■■□□ 2.67
ROM1-203ENST00000525947 JDP2Q8WYK2 163 aa31.73■■■□□ 2.67
ROM1-203ENST00000525947 FZD9O00144 591 aa31.72■■■□□ 2.67
ROM1-203ENST00000525947 L3MBTL3Q96JM7 780 aaPredicted RBP31.72■■■□□ 2.67
ROM1-203ENST00000525947 ISCA1Q9BUE6 129 aa31.72■■■□□ 2.67
ROM1-203ENST00000525947 PHAXQ9H814 394 aaKnown RBP31.72■■■□□ 2.67
ROM1-203ENST00000525947 CACNA1FO60840 1977 aa31.71■■■□□ 2.67
ROM1-203ENST00000525947 IQCA1LA6NCM1 817 aa31.71■■■□□ 2.67
ROM1-203ENST00000525947 RTL5Q5HYW3 569 aaPredicted RBP31.71■■■□□ 2.67
ROM1-203ENST00000525947 CHADLQ6NUI6 762 aa31.71■■■□□ 2.67
ROM1-203ENST00000525947 FAM89AQ96GI7 184 aa31.71■■■□□ 2.67
ROM1-203ENST00000525947 TMX4Q9H1E5 349 aaPredicted RBP31.71■■■□□ 2.67
ROM1-203ENST00000525947 RIC3Q7Z5B4 369 aa31.7■■■□□ 2.67
ROM1-203ENST00000525947 LARGE2Q8N3Y3 721 aa31.7■■■□□ 2.67
ROM1-203ENST00000525947 TAF1DQ9H5J8 278 aaPredicted RBP31.7■■■□□ 2.67
ROM1-203ENST00000525947 MRS2Q9HD23 443 aa31.7■■■□□ 2.67
ROM1-203ENST00000525947 ATP6V0A2Q9Y487 856 aa31.7■■■□□ 2.67
ROM1-203ENST00000525947 GRIPAP1Q4V328 841 aa31.69■■■□□ 2.66
ROM1-203ENST00000525947 DDX46Q7L014 1031 aaKnown RBP31.69■■■□□ 2.66
ROM1-203ENST00000525947 KLRG1Q96E93 195 aa31.69■■■□□ 2.66
ROM1-203ENST00000525947 GJA3Q9Y6H8 435 aa31.69■■■□□ 2.66
ROM1-203ENST00000525947 MYH3P11055 1940 aa31.69■■■□□ 2.66
ROM1-203ENST00000525947 ANP32CO43423 234 aa31.68■■■□□ 2.66
ROM1-203ENST00000525947 EAPPQ56P03 285 aaPredicted RBP31.68■■■□□ 2.66
ROM1-203ENST00000525947 TSR2Q969E8 191 aaKnown RBP31.68■■■□□ 2.66
ROM1-203ENST00000525947 LRRC37AA6NMS7 1700 aa31.68■■■□□ 2.66
ROM1-203ENST00000525947 LTBP1Q14766 1721 aa31.68■■■□□ 2.66
ROM1-203ENST00000525947 ADAMTSL1Q8N6G6 1762 aa31.68■■■□□ 2.66
ROM1-203ENST00000525947 EIF6P56537 245 aaKnown RBP31.67■■■□□ 2.66
ROM1-203ENST00000525947 TSPYL6Q8N831 410 aa31.67■■■□□ 2.66
ROM1-203ENST00000525947 HACL1Q9UJ83 578 aa31.67■■■□□ 2.66
ROM1-203ENST00000525947 SPEF2Q9C093 1822 aa31.66■■■□□ 2.66
ROM1-203ENST00000525947 GOLGA2Q08379 1002 aa31.66■■■□□ 2.66
ROM1-203ENST00000525947 COL4A1P02462 1669 aa31.66■■■□□ 2.66
ROM1-203ENST00000525947 PPIP5K2O43314 1243 aa31.65■■■□□ 2.66
ROM1-203ENST00000525947 BBOX1O75936 387 aa31.65■■■□□ 2.66
ROM1-203ENST00000525947 AOC3Q16853 763 aa31.65■■■□□ 2.66
ROM1-203ENST00000525947 GPC2Q8N158 579 aa31.65■■■□□ 2.66
ROM1-203ENST00000525947 GRAPQ13588 217 aa31.64■■■□□ 2.66
ROM1-203ENST00000525947 SP8Q8IXZ3 490 aa31.64■■■□□ 2.66
ROM1-203ENST00000525947 GRAPLQ8TC17 118 aaPredicted RBP31.64■■■□□ 2.66
ROM1-203ENST00000525947 MYD88Q99836 296 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms