RNA–Protein interactions for RNA: ENST00000525554.1

IFITM1-203, Transcript of interferon induced transmembrane protein 1, humanhuman

TSL 3

Gene IFITM1, Length 80 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM1-203ENST00000525554 LDHDQ86WU2 507 aa17.95■□□□□ 0.46
IFITM1-203ENST00000525554 JDP2Q8WYK2 163 aa17.95■□□□□ 0.46
IFITM1-203ENST00000525554 ABCC12Q96J65 1359 aa17.94■□□□□ 0.46
IFITM1-203ENST00000525554 SCN4AP35499 1836 aa17.94■□□□□ 0.46
IFITM1-203ENST00000525554 NTSR2O95665 410 aa17.94■□□□□ 0.46
IFITM1-203ENST00000525554 EIF2S2P20042 333 aaKnown RBP17.94■□□□□ 0.46
IFITM1-203ENST00000525554 DDX10Q13206 875 aaKnown RBP17.94■□□□□ 0.46
IFITM1-203ENST00000525554 HSP90AB3PQ58FF7 597 aa17.94■□□□□ 0.46
IFITM1-203ENST00000525554 NLRP3Q96P20 1036 aa17.94■□□□□ 0.46
IFITM1-203ENST00000525554 TAF1DQ9H5J8 278 aaPredicted RBP17.94■□□□□ 0.46
IFITM1-203ENST00000525554 CREBZFQ9NS37 354 aa17.94■□□□□ 0.46
IFITM1-203ENST00000525554 PCNTO95613 3336 aa17.94■□□□□ 0.46
IFITM1-203ENST00000525554 CHL1O00533 1208 aa17.93■□□□□ 0.46
IFITM1-203ENST00000525554 OLFM4Q6UX06 510 aa17.93■□□□□ 0.46
IFITM1-203ENST00000525554 PNMA8AQ86V59 439 aaPredicted RBP17.93■□□□□ 0.46
IFITM1-203ENST00000525554 GPC2Q8N158 579 aa17.93■□□□□ 0.46
IFITM1-203ENST00000525554 RUNDC1Q96C34 613 aa17.93■□□□□ 0.46
IFITM1-203ENST00000525554 UTP14AQ9BVJ6 771 aaKnown RBP17.93■□□□□ 0.46
IFITM1-203ENST00000525554 VPS33BQ9H267 617 aa17.93■□□□□ 0.46
IFITM1-203ENST00000525554 HACL1Q9UJ83 578 aa17.93■□□□□ 0.46
IFITM1-203ENST00000525554 SNED1Q8TER0 1413 aa17.92■□□□□ 0.46
IFITM1-203ENST00000525554 TMX4Q9H1E5 349 aaPredicted RBP17.92■□□□□ 0.46
IFITM1-203ENST00000525554 WDR43Q15061 677 aaKnown RBP eCLIP17.91■□□□□ 0.46
IFITM1-203ENST00000525554 DDX21Q9NR30 783 aaKnown RBP eCLIP17.91■□□□□ 0.46
IFITM1-203ENST00000525554 HOXB7P09629 217 aa17.9■□□□□ 0.46
IFITM1-203ENST00000525554 COPS6Q7L5N1 327 aa17.9■□□□□ 0.46
IFITM1-203ENST00000525554 ZNF541Q9H0D2 1346 aa17.9■□□□□ 0.46
IFITM1-203ENST00000525554 PPEF1O14829 653 aaPredicted RBP17.89■□□□□ 0.45
IFITM1-203ENST00000525554 BBOX1O75936 387 aa17.89■□□□□ 0.45
IFITM1-203ENST00000525554 POTEIP0CG38 1075 aa17.89■□□□□ 0.45
IFITM1-203ENST00000525554 POTEJP0CG39 1038 aa17.89■□□□□ 0.45
IFITM1-203ENST00000525554 EPHX2P34913 555 aa17.89■□□□□ 0.45
IFITM1-203ENST00000525554 EIF6P56537 245 aaKnown RBP17.89■□□□□ 0.45
IFITM1-203ENST00000525554 PASKQ96RG2 1323 aa17.89■□□□□ 0.45
IFITM1-203ENST00000525554 TCIRG1Q13488 830 aa17.88■□□□□ 0.45
IFITM1-203ENST00000525554 NEUROD2Q15784 382 aa17.88■□□□□ 0.45
IFITM1-203ENST00000525554 PROSER3Q2NL68 480 aa17.88■□□□□ 0.45
IFITM1-203ENST00000525554 TRIM35Q9UPQ4 493 aa17.88■□□□□ 0.45
IFITM1-203ENST00000525554 ATP6V0A2Q9Y487 856 aa17.88■□□□□ 0.45
IFITM1-203ENST00000525554 ITGBL1O95965 494 aaPredicted RBP17.87■□□□□ 0.45
IFITM1-203ENST00000525554 NLRP10Q86W26 655 aa17.87■□□□□ 0.45
IFITM1-203ENST00000525554 LARGE2Q8N3Y3 721 aa17.87■□□□□ 0.45
IFITM1-203ENST00000525554 SUPT20HQ8NEM7 779 aa17.87■□□□□ 0.45
IFITM1-203ENST00000525554 XAGE3Q8WTP9 111 aa17.87■□□□□ 0.45
IFITM1-203ENST00000525554 ADAMTS8Q9UP79 889 aa17.87■□□□□ 0.45
IFITM1-203ENST00000525554 EAPPQ56P03 285 aaPredicted RBP17.86■□□□□ 0.45
IFITM1-203ENST00000525554 CCDC146Q8IYE0 955 aa17.86■□□□□ 0.45
IFITM1-203ENST00000525554 CFAP44Q96MT7 982 aa17.86■□□□□ 0.45
IFITM1-203ENST00000525554 DBF4Q9UBU7 674 aaPredicted RBP17.86■□□□□ 0.45
IFITM1-203ENST00000525554 TMEM88BA6NKF7 163 aa17.85■□□□□ 0.45
IFITM1-203ENST00000525554 ANXA1P04083 346 aa17.85■□□□□ 0.45
IFITM1-203ENST00000525554 AIMP1Q12904 312 aaKnown RBP17.85■□□□□ 0.45
IFITM1-203ENST00000525554 C3orf67Q6ZVT6 689 aa17.85■□□□□ 0.45
IFITM1-203ENST00000525554 TMC4Q7Z404 712 aa17.85■□□□□ 0.45
IFITM1-203ENST00000525554 SP8Q8IXZ3 490 aa17.85■□□□□ 0.45
IFITM1-203ENST00000525554 SH3TC1Q8TE82 1336 aa17.85■□□□□ 0.45
IFITM1-203ENST00000525554 RTFDC1Q9BY42 306 aaPredicted RBP17.85■□□□□ 0.45
IFITM1-203ENST00000525554 CLEC11AQ9Y240 323 aa17.85■□□□□ 0.45
IFITM1-203ENST00000525554 LMOD1P29536 600 aaPredicted RBP17.84■□□□□ 0.45
IFITM1-203ENST00000525554 COL13A1Q5TAT6 717 aaPredicted RBP17.84■□□□□ 0.45
IFITM1-203ENST00000525554 PLBD2Q8NHP8 589 aa17.84■□□□□ 0.45
IFITM1-203ENST00000525554 PRKRIP1Q9H875 184 aaPredicted RBP17.84■□□□□ 0.45
IFITM1-203ENST00000525554 TRMT112Q9UI30 125 aaKnown RBP17.84■□□□□ 0.45
IFITM1-203ENST00000525554 LAS1LQ9Y4W2 734 aaKnown RBP17.84■□□□□ 0.45
IFITM1-203ENST00000525554 HSPA1AP0DMV8 641 aaKnown RBP17.83■□□□□ 0.44
IFITM1-203ENST00000525554 HSPA1BP0DMV9 641 aaKnown RBP17.83■□□□□ 0.44
IFITM1-203ENST00000525554 HDGFL1Q5TGJ6 251 aa17.83■□□□□ 0.44
IFITM1-203ENST00000525554 ANKRD13DQ6ZTN6 518 aa17.83■□□□□ 0.44
IFITM1-203ENST00000525554 DDX46Q7L014 1031 aaKnown RBP17.83■□□□□ 0.44
IFITM1-203ENST00000525554 NIM1KQ8IY84 436 aa17.83■□□□□ 0.44
IFITM1-203ENST00000525554 CNTROBQ8N137 903 aa17.83■□□□□ 0.44
IFITM1-203ENST00000525554 NECTIN2Q92692 538 aa17.83■□□□□ 0.44
IFITM1-203ENST00000525554 HYPKQ9NX55 129 aa17.83■□□□□ 0.44
IFITM1-203ENST00000525554 CHPF2Q9P2E5 772 aa17.83■□□□□ 0.44
IFITM1-203ENST00000525554 CNTNAP1P78357 1384 aa17.82■□□□□ 0.44
IFITM1-203ENST00000525554 ABCC4O15439 1325 aa17.82■□□□□ 0.44
IFITM1-203ENST00000525554 PPIP5K2O43314 1243 aa17.82■□□□□ 0.44
IFITM1-203ENST00000525554 CALD1Q05682 793 aaKnown RBP17.82■□□□□ 0.44
IFITM1-203ENST00000525554 TRIM28Q13263 835 aaKnown RBP17.82■□□□□ 0.44
IFITM1-203ENST00000525554 CHMP4AQ9BY43 222 aa17.82■□□□□ 0.44
IFITM1-203ENST00000525554 GJA3Q9Y6H8 435 aa17.82■□□□□ 0.44
IFITM1-203ENST00000525554 TCERG1O14776 1098 aaKnown RBP17.81■□□□□ 0.44
IFITM1-203ENST00000525554 HCLS1P14317 486 aaPredicted RBP17.81■□□□□ 0.44
IFITM1-203ENST00000525554 KRT24Q2M2I5 525 aa17.81■□□□□ 0.44
IFITM1-203ENST00000525554 USP50Q70EL3 339 aaPredicted RBP17.81■□□□□ 0.44
IFITM1-203ENST00000525554 MKRN1Q9UHC7 482 aaKnown RBP17.81■□□□□ 0.44
IFITM1-203ENST00000525554 ZNRF3Q9ULT6 936 aa17.81■□□□□ 0.44
IFITM1-203ENST00000525554 ADAMTSL1Q8N6G6 1762 aa17.81■□□□□ 0.44
IFITM1-203ENST00000525554 ZNF853P0CG23 659 aa17.8■□□□□ 0.44
IFITM1-203ENST00000525554 SCNN1DP51172 638 aa17.8■□□□□ 0.44
IFITM1-203ENST00000525554 GRAPQ13588 217 aa17.8■□□□□ 0.44
IFITM1-203ENST00000525554 DPP8Q6V1X1 898 aaPredicted RBP17.8■□□□□ 0.44
IFITM1-203ENST00000525554 MPNDQ8N594 471 aa17.8■□□□□ 0.44
IFITM1-203ENST00000525554 GRAPLQ8TC17 118 aaPredicted RBP17.8■□□□□ 0.44
IFITM1-203ENST00000525554 ISCA1Q9BUE6 129 aa17.8■□□□□ 0.44
IFITM1-203ENST00000525554 DUSP27Q5VZP5 1158 aa17.79■□□□□ 0.44
IFITM1-203ENST00000525554 MAP1SQ66K74 1059 aaPredicted RBP17.79■□□□□ 0.44
IFITM1-203ENST00000525554 IFT57Q9NWB7 429 aa17.79■□□□□ 0.44
IFITM1-203ENST00000525554 COL4A5P29400 1685 aa17.79■□□□□ 0.44
IFITM1-203ENST00000525554 ANKRD36CQ5JPF3 1778 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms