RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 IBTKQ9P2D0 1353 aaPredicted RBP31.64■■■□□ 2.66
USP47-205ENST00000525257 ITGBL1O95965 494 aaPredicted RBP31.63■■■□□ 2.65
USP47-205ENST00000525257 JDP2Q8WYK2 163 aa31.63■■■□□ 2.65
USP47-205ENST00000525257 RIC1Q4ADV7 1423 aa31.63■■■□□ 2.65
USP47-205ENST00000525257 COL4A5P29400 1685 aa31.62■■■□□ 2.65
USP47-205ENST00000525257 SUSD4Q5VX71 490 aa31.62■■■□□ 2.65
USP47-205ENST00000525257 GPC2Q8N158 579 aa31.62■■■□□ 2.65
USP47-205ENST00000525257 TMEM88BA6NKF7 163 aa31.61■■■□□ 2.65
USP47-205ENST00000525257 CC2D2BQ6DHV5 1058 aa31.61■■■□□ 2.65
USP47-205ENST00000525257 HOXA10P31260 410 aaPredicted RBP31.6■■■□□ 2.65
USP47-205ENST00000525257 SLC51AQ86UW1 340 aa31.6■■■□□ 2.65
USP47-205ENST00000525257 PNMA8AQ86V59 439 aaPredicted RBP31.6■■■□□ 2.65
USP47-205ENST00000525257 ZNF34Q8IZ26 560 aa31.59■■■□□ 2.65
USP47-205ENST00000525257 PNNQ9H307 717 aaKnown RBP31.59■■■□□ 2.65
USP47-205ENST00000525257 GJA3Q9Y6H8 435 aa31.59■■■□□ 2.65
USP47-205ENST00000525257 TCERG1O14776 1098 aaKnown RBP31.58■■■□□ 2.65
USP47-205ENST00000525257 NTSR2O95665 410 aa31.58■■■□□ 2.65
USP47-205ENST00000525257 MAP1SQ66K74 1059 aaPredicted RBP31.58■■■□□ 2.65
USP47-205ENST00000525257 GIGYF2Q6Y7W6 1299 aaKnown RBP31.58■■■□□ 2.65
USP47-205ENST00000525257 TSPYL4Q9UJ04 414 aa31.58■■■□□ 2.65
USP47-205ENST00000525257 ERBB4Q15303 1308 aa31.57■■■□□ 2.64
USP47-205ENST00000525257 EIF6P56537 245 aaKnown RBP31.57■■■□□ 2.64
USP47-205ENST00000525257 RBM17Q96I25 401 aaKnown RBP31.57■■■□□ 2.64
USP47-205ENST00000525257 PPEF1O14829 653 aaPredicted RBP31.56■■■□□ 2.64
USP47-205ENST00000525257 FOXN1O15353 648 aa31.56■■■□□ 2.64
USP47-205ENST00000525257 VEGFBP49765 207 aa31.56■■■□□ 2.64
USP47-205ENST00000525257 C3orf67Q6ZVT6 689 aa31.56■■■□□ 2.64
USP47-205ENST00000525257 CNTROBQ8N137 903 aa31.56■■■□□ 2.64
USP47-205ENST00000525257 LARGE2Q8N3Y3 721 aa31.55■■■□□ 2.64
USP47-205ENST00000525257 CRAMP1Q96RY5 1269 aa31.55■■■□□ 2.64
USP47-205ENST00000525257 LTBP1Q14766 1721 aa31.55■■■□□ 2.64
USP47-205ENST00000525257 EIF2S2P20042 333 aaKnown RBP31.54■■■□□ 2.64
USP47-205ENST00000525257 PPP1R42Q7Z4L9 355 aa31.54■■■□□ 2.64
USP47-205ENST00000525257 LMOD1P29536 600 aaPredicted RBP31.52■■■□□ 2.64
USP47-205ENST00000525257 GRIPAP1Q4V328 841 aa31.52■■■□□ 2.64
USP47-205ENST00000525257 PARP10Q53GL7 1025 aa31.52■■■□□ 2.64
USP47-205ENST00000525257 LRP10Q7Z4F1 713 aa31.52■■■□□ 2.64
USP47-205ENST00000525257 ANXA1P04083 346 aa31.51■■■□□ 2.63
USP47-205ENST00000525257 RIPK4P57078 832 aa31.51■■■□□ 2.63
USP47-205ENST00000525257 PDIA6Q15084 440 aa31.51■■■□□ 2.63
USP47-205ENST00000525257 PROSER3Q2NL68 480 aa31.5■■■□□ 2.63
USP47-205ENST00000525257 AIDAQ96BJ3 306 aa31.5■■■□□ 2.63
USP47-205ENST00000525257 NLRP3Q96P20 1036 aa31.5■■■□□ 2.63
USP47-205ENST00000525257 SCNN1DP51172 638 aa31.49■■■□□ 2.63
USP47-205ENST00000525257 UTP14AQ9BVJ6 771 aaKnown RBP31.49■■■□□ 2.63
USP47-205ENST00000525257 NIM1KQ8IY84 436 aa31.48■■■□□ 2.63
USP47-205ENST00000525257 PPIP5K2O43314 1243 aa31.47■■■□□ 2.63
USP47-205ENST00000525257 EPS15P42566 896 aa31.47■■■□□ 2.63
USP47-205ENST00000525257 ANKRD36CQ5JPF3 1778 aa31.47■■■□□ 2.63
USP47-205ENST00000525257 RASSF10A6NK89 507 aa31.46■■■□□ 2.63
USP47-205ENST00000525257 DEFB115Q30KQ5 88 aa31.46■■■□□ 2.63
USP47-205ENST00000525257 NECTIN2Q92692 538 aa31.46■■■□□ 2.63
USP47-205ENST00000525257 TMX4Q9H1E5 349 aaPredicted RBP31.46■■■□□ 2.63
USP47-205ENST00000525257 ABT1Q9ULW3 272 aaKnown RBP31.46■■■□□ 2.63
USP47-205ENST00000525257 CTCFP49711 727 aaPredicted RBP31.45■■■□□ 2.63
USP47-205ENST00000525257 AOC3Q16853 763 aa31.45■■■□□ 2.63
USP47-205ENST00000525257 DDX21Q9NR30 783 aaKnown RBP eCLIP31.45■■■□□ 2.63
USP47-205ENST00000525257 LAMB2P55268 1798 aa31.45■■■□□ 2.62
USP47-205ENST00000525257 ABCC4O15439 1325 aa31.45■■■□□ 2.62
USP47-205ENST00000525257 SLC10A5Q5PT55 438 aa31.44■■■□□ 2.62
USP47-205ENST00000525257 PRDM10Q9NQV6 1147 aa31.44■■■□□ 2.62
USP47-205ENST00000525257 ATP6V0A2Q9Y487 856 aa31.44■■■□□ 2.62
USP47-205ENST00000525257 TMPOP42166 694 aaKnown RBP31.43■■■□□ 2.62
USP47-205ENST00000525257 AIMP1Q12904 312 aaKnown RBP31.43■■■□□ 2.62
USP47-205ENST00000525257 BABAM1Q9NWV8 329 aa31.43■■■□□ 2.62
USP47-205ENST00000525257 WBP1LQ9NX94 342 aa31.43■■■□□ 2.62
USP47-205ENST00000525257 FMR1Q06787 632 aaKnown RBP eCLIP31.42■■■□□ 2.621e-9■■■■■ 27.7
USP47-205ENST00000525257 LMOD3Q0VAK6 560 aa31.41■■■□□ 2.62
USP47-205ENST00000525257 COPS6Q7L5N1 327 aa31.41■■■□□ 2.62
USP47-205ENST00000525257 XAGE3Q8WTP9 111 aa31.41■■■□□ 2.62
USP47-205ENST00000525257 HCLS1P14317 486 aaPredicted RBP31.4■■■□□ 2.62
USP47-205ENST00000525257 USP50Q70EL3 339 aaPredicted RBP31.4■■■□□ 2.62
USP47-205ENST00000525257 WDR33Q9C0J8 1336 aaKnown RBP31.4■■■□□ 2.62
USP47-205ENST00000525257 RALBP1Q15311 655 aa31.39■■■□□ 2.62
USP47-205ENST00000525257 HSP90AB3PQ58FF7 597 aa31.39■■■□□ 2.62
USP47-205ENST00000525257 NLRP10Q86W26 655 aa31.39■■■□□ 2.62
USP47-205ENST00000525257 LBX1P52954 281 aa31.38■■■□□ 2.61
USP47-205ENST00000525257 SUPT20HQ8NEM7 779 aa31.38■■■□□ 2.61
USP47-205ENST00000525257 NEUROD2Q15784 382 aa31.37■■■□□ 2.61
USP47-205ENST00000525257 DPP8Q6V1X1 898 aaPredicted RBP31.37■■■□□ 2.61
USP47-205ENST00000525257 VPS33BQ9H267 617 aa31.37■■■□□ 2.61
USP47-205ENST00000525257 TRPM7Q96QT4 1865 aa31.36■■■□□ 2.61
USP47-205ENST00000525257 TRAF5O00463 557 aa31.36■■■□□ 2.61
USP47-205ENST00000525257 CXCL9Q07325 125 aa31.36■■■□□ 2.61
USP47-205ENST00000525257 KRT24Q2M2I5 525 aa31.36■■■□□ 2.61
USP47-205ENST00000525257 CCDC146Q8IYE0 955 aa31.36■■■□□ 2.61
USP47-205ENST00000525257 RTFDC1Q9BY42 306 aaPredicted RBP31.36■■■□□ 2.61
USP47-205ENST00000525257 GPRC5DQ9NZD1 345 aa31.36■■■□□ 2.61
USP47-205ENST00000525257 TRMT112Q9UI30 125 aaKnown RBP31.36■■■□□ 2.61
USP47-205ENST00000525257 ZNRF3Q9ULT6 936 aa31.36■■■□□ 2.61
USP47-205ENST00000525257 BBOX1O75936 387 aa31.35■■■□□ 2.61
USP47-205ENST00000525257 PAXIP1Q6ZW49 1069 aaPredicted RBP31.35■■■□□ 2.61
USP47-205ENST00000525257 SP8Q8IXZ3 490 aa31.35■■■□□ 2.61
USP47-205ENST00000525257 ADARB2Q9NS39 739 aaKnown RBP31.35■■■□□ 2.61
USP47-205ENST00000525257 TCIRG1Q13488 830 aa31.34■■■□□ 2.61
USP47-205ENST00000525257 DDX46Q7L014 1031 aaKnown RBP31.34■■■□□ 2.61
USP47-205ENST00000525257 MPNDQ8N594 471 aa31.34■■■□□ 2.61
USP47-205ENST00000525257 ZNF428Q96B54 188 aa31.34■■■□□ 2.61
USP47-205ENST00000525257 TAF1P21675 1872 aa31.33■■■□□ 2.61
USP47-205ENST00000525257 SH3TC1Q8TE82 1336 aa31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms