RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 ADAMTSL1Q8N6G6 1762 aa22.59■■□□□ 1.21
TSKU-202ENST00000525167 GIGYF2Q6Y7W6 1299 aaKnown RBP22.59■■□□□ 1.21
TSKU-202ENST00000525167 ZNF34Q8IZ26 560 aa22.59■■□□□ 1.21
TSKU-202ENST00000525167 JDP2Q8WYK2 163 aa22.59■■□□□ 1.21
TSKU-202ENST00000525167 ZBTB3Q9H5J0 574 aa22.59■■□□□ 1.21
TSKU-202ENST00000525167 EPHX2P34913 555 aa22.58■■□□□ 1.21
TSKU-202ENST00000525167 PARP10Q53GL7 1025 aa22.58■■□□□ 1.21
TSKU-202ENST00000525167 CRAMP1Q96RY5 1269 aa22.58■■□□□ 1.21
TSKU-202ENST00000525167 CNTNAP1P78357 1384 aa22.58■■□□□ 1.21
TSKU-202ENST00000525167 NTSR2O95665 410 aa22.57■■□□□ 1.2
TSKU-202ENST00000525167 GPTP24298 496 aa22.57■■□□□ 1.2
TSKU-202ENST00000525167 SUSD4Q5VX71 490 aa22.57■■□□□ 1.2
TSKU-202ENST00000525167 PPP1R42Q7Z4L9 355 aa22.57■■□□□ 1.2
TSKU-202ENST00000525167 MKRN1Q9UHC7 482 aaKnown RBP22.57■■□□□ 1.2
TSKU-202ENST00000525167 TSPYL4Q9UJ04 414 aa22.57■■□□□ 1.2
TSKU-202ENST00000525167 ITGBL1O95965 494 aaPredicted RBP22.56■■□□□ 1.2
TSKU-202ENST00000525167 EAPPQ56P03 285 aaPredicted RBP22.56■■□□□ 1.2
TSKU-202ENST00000525167 RBM17Q96I25 401 aaKnown RBP22.56■■□□□ 1.2
TSKU-202ENST00000525167 TMEM88BA6NKF7 163 aa22.55■■□□□ 1.2
TSKU-202ENST00000525167 LMOD3Q0VAK6 560 aa22.55■■□□□ 1.2
TSKU-202ENST00000525167 RNF123Q5XPI4 1314 aa22.55■■□□□ 1.2
TSKU-202ENST00000525167 EIF6P56537 245 aaKnown RBP22.54■■□□□ 1.2
TSKU-202ENST00000525167 RALBP1Q15311 655 aa22.54■■□□□ 1.2
TSKU-202ENST00000525167 LRP10Q7Z4F1 713 aa22.54■■□□□ 1.2
TSKU-202ENST00000525167 CLEC11AQ9Y240 323 aa22.54■■□□□ 1.2
TSKU-202ENST00000525167 PPEF1O14829 653 aaPredicted RBP22.52■■□□□ 1.2
TSKU-202ENST00000525167 RIPK4P57078 832 aa22.52■■□□□ 1.2
TSKU-202ENST00000525167 PDIA6Q15084 440 aa22.52■■□□□ 1.2
TSKU-202ENST00000525167 NLRP3Q96P20 1036 aa22.52■■□□□ 1.2
TSKU-202ENST00000525167 SLC10A5Q5PT55 438 aa22.51■■□□□ 1.19
TSKU-202ENST00000525167 LARGE2Q8N3Y3 721 aa22.51■■□□□ 1.19
TSKU-202ENST00000525167 TMX4Q9H1E5 349 aaPredicted RBP22.51■■□□□ 1.19
TSKU-202ENST00000525167 VPS33BQ9H267 617 aa22.51■■□□□ 1.19
TSKU-202ENST00000525167 COL4A5P29400 1685 aa22.51■■□□□ 1.19
TSKU-202ENST00000525167 LMOD1P29536 600 aaPredicted RBP22.5■■□□□ 1.19
TSKU-202ENST00000525167 HSP90AB3PQ58FF7 597 aa22.5■■□□□ 1.19
TSKU-202ENST00000525167 CNTROBQ8N137 903 aa22.5■■□□□ 1.19
TSKU-202ENST00000525167 UTP14AQ9BVJ6 771 aaKnown RBP22.5■■□□□ 1.19
TSKU-202ENST00000525167 EIF2S2P20042 333 aaKnown RBP22.49■■□□□ 1.19
TSKU-202ENST00000525167 TMPOP42166 694 aaKnown RBP22.49■■□□□ 1.19
TSKU-202ENST00000525167 ATP6V0A2Q9Y487 856 aa22.48■■□□□ 1.19
TSKU-202ENST00000525167 GJA3Q9Y6H8 435 aa22.48■■□□□ 1.19
TSKU-202ENST00000525167 RASSF10A6NK89 507 aa22.47■■□□□ 1.19
TSKU-202ENST00000525167 VEGFBP49765 207 aa22.47■■□□□ 1.19
TSKU-202ENST00000525167 MAP1SQ66K74 1059 aaPredicted RBP22.47■■□□□ 1.19
TSKU-202ENST00000525167 C3orf67Q6ZVT6 689 aa22.47■■□□□ 1.19
TSKU-202ENST00000525167 NIM1KQ8IY84 436 aa22.47■■□□□ 1.19
TSKU-202ENST00000525167 ANKRD36CQ5JPF3 1778 aa22.46■■□□□ 1.19
TSKU-202ENST00000525167 SCNN1DP51172 638 aa22.46■■□□□ 1.19
TSKU-202ENST00000525167 PROSER3Q2NL68 480 aa22.46■■□□□ 1.19
TSKU-202ENST00000525167 SUPT20HQ8NEM7 779 aa22.46■■□□□ 1.19
TSKU-202ENST00000525167 USP50Q70EL3 339 aaPredicted RBP22.45■■□□□ 1.18
TSKU-202ENST00000525167 AIDAQ96BJ3 306 aa22.45■■□□□ 1.18
TSKU-202ENST00000525167 RTFDC1Q9BY42 306 aaPredicted RBP22.45■■□□□ 1.18
TSKU-202ENST00000525167 PRDM10Q9NQV6 1147 aa22.45■■□□□ 1.18
TSKU-202ENST00000525167 ABCC4O15439 1325 aa22.45■■□□□ 1.18
TSKU-202ENST00000525167 LTBP1Q14766 1721 aa22.45■■□□□ 1.18
TSKU-202ENST00000525167 FOXN1O15353 648 aa22.44■■□□□ 1.18
TSKU-202ENST00000525167 PPIP5K2O43314 1243 aa22.44■■□□□ 1.18
TSKU-202ENST00000525167 CAPN15O75808 1086 aa22.44■■□□□ 1.18
TSKU-202ENST00000525167 BBOX1O75936 387 aa22.44■■□□□ 1.18
TSKU-202ENST00000525167 COPS6Q7L5N1 327 aa22.44■■□□□ 1.18
TSKU-202ENST00000525167 NLRP10Q86W26 655 aa22.44■■□□□ 1.18
TSKU-202ENST00000525167 DDX21Q9NR30 783 aaKnown RBP eCLIP22.44■■□□□ 1.18
TSKU-202ENST00000525167 MYBBP1AQ9BQG0 1328 aaKnown RBP22.43■■□□□ 1.18
TSKU-202ENST00000525167 TCERG1O14776 1098 aaKnown RBP22.43■■□□□ 1.18
TSKU-202ENST00000525167 CTCFP49711 727 aaPredicted RBP22.43■■□□□ 1.18
TSKU-202ENST00000525167 DEFB115Q30KQ5 88 aa22.43■■□□□ 1.18
TSKU-202ENST00000525167 CHL1O00533 1208 aa22.42■■□□□ 1.18
TSKU-202ENST00000525167 ANXA1P04083 346 aa22.42■■□□□ 1.18
TSKU-202ENST00000525167 EPS15P42566 896 aa22.42■■□□□ 1.18
TSKU-202ENST00000525167 TCIRG1Q13488 830 aa22.42■■□□□ 1.18
TSKU-202ENST00000525167 SP8Q8IXZ3 490 aa22.42■■□□□ 1.18
TSKU-202ENST00000525167 XAGE3Q8WTP9 111 aa22.42■■□□□ 1.18
TSKU-202ENST00000525167 WBP1LQ9NX94 342 aa22.42■■□□□ 1.18
TSKU-202ENST00000525167 SH3TC1Q8TE82 1336 aa22.41■■□□□ 1.18
TSKU-202ENST00000525167 HOXB7P09629 217 aa22.41■■□□□ 1.18
TSKU-202ENST00000525167 AOC3Q16853 763 aa22.41■■□□□ 1.18
TSKU-202ENST00000525167 ZNRF3Q9ULT6 936 aa22.41■■□□□ 1.18
TSKU-202ENST00000525167 LAMB2P55268 1798 aa22.4■■□□□ 1.18
TSKU-202ENST00000525167 CDHR2Q9BYE9 1310 aa22.4■■□□□ 1.18
TSKU-202ENST00000525167 DPP8Q6V1X1 898 aaPredicted RBP22.4■■□□□ 1.18
TSKU-202ENST00000525167 DDX46Q7L014 1031 aaKnown RBP22.4■■□□□ 1.18
TSKU-202ENST00000525167 TMC4Q7Z404 712 aa22.4■■□□□ 1.18
TSKU-202ENST00000525167 SLC51AQ86UW1 340 aa22.4■■□□□ 1.18
TSKU-202ENST00000525167 ADARB2Q9NS39 739 aaKnown RBP22.4■■□□□ 1.18
TSKU-202ENST00000525167 TRMT112Q9UI30 125 aaKnown RBP22.4■■□□□ 1.18
TSKU-202ENST00000525167 ABT1Q9ULW3 272 aaKnown RBP22.4■■□□□ 1.18
TSKU-202ENST00000525167 AIMP1Q12904 312 aaKnown RBP22.39■■□□□ 1.17
TSKU-202ENST00000525167 RUNDC1Q96C34 613 aa22.39■■□□□ 1.17
TSKU-202ENST00000525167 GPRC5DQ9NZD1 345 aa22.39■■□□□ 1.17
TSKU-202ENST00000525167 HCLS1P14317 486 aaPredicted RBP22.38■■□□□ 1.17
TSKU-202ENST00000525167 MAP2K1Q02750 393 aaPredicted RBP22.38■■□□□ 1.17
TSKU-202ENST00000525167 KIAA2012Q0VF49 1180 aa22.38■■□□□ 1.17
TSKU-202ENST00000525167 GRAPQ13588 217 aa22.38■■□□□ 1.17
TSKU-202ENST00000525167 MPNDQ8N594 471 aa22.38■■□□□ 1.17
TSKU-202ENST00000525167 GRAPLQ8TC17 118 aaPredicted RBP22.38■■□□□ 1.17
TSKU-202ENST00000525167 NECTIN2Q92692 538 aa22.38■■□□□ 1.17
TSKU-202ENST00000525167 WDR33Q9C0J8 1336 aaKnown RBP22.37■■□□□ 1.17
TSKU-202ENST00000525167 CXCL9Q07325 125 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms