RNA–Protein interactions for RNA: ENST00000525116.5

CASP4-205, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-205ENST00000525116 PLSCR2Q9NRY7 297 aa9.85□□□□□ -0.83
CASP4-205ENST00000525116 SALL2Q9Y467 1007 aaPredicted RBP9.85□□□□□ -0.83
CASP4-205ENST00000525116 KTN1Q86UP2 1357 aaKnown RBP9.85□□□□□ -0.83
CASP4-205ENST00000525116 FMNL1O95466 1100 aaPredicted RBP9.84□□□□□ -0.83
CASP4-205ENST00000525116 NEUROD1Q13562 356 aa9.84□□□□□ -0.83
CASP4-205ENST00000525116 SIN3AQ96ST3 1273 aa9.84□□□□□ -0.83
CASP4-205ENST00000525116 USB1Q9BQ65 265 aaKnown RBP9.84□□□□□ -0.83
CASP4-205ENST00000525116 CCDC7Q96M83 1385 aa9.84□□□□□ -0.83
CASP4-205ENST00000525116 TTC21AQ8NDW8 1320 aa9.83□□□□□ -0.84
CASP4-205ENST00000525116 SENP3-EIF4A1A0A087X0R7 540 aa9.83□□□□□ -0.84
CASP4-205ENST00000525116 NME9Q86XW9 330 aa9.83□□□□□ -0.84
CASP4-205ENST00000525116 CALR3Q96L12 384 aaKnown RBP9.83□□□□□ -0.84
CASP4-205ENST00000525116 TRIM34Q9BYJ4 488 aa9.83□□□□□ -0.84
CASP4-205ENST00000525116 TNS2Q63HR2 1409 aa9.82□□□□□ -0.84
CASP4-205ENST00000525116 NFAT5O94916 1531 aa9.82□□□□□ -0.84
CASP4-205ENST00000525116 TRPM1Q7Z4N2 1603 aa9.82□□□□□ -0.84
CASP4-205ENST00000525116 IL2RBP14784 551 aa9.82□□□□□ -0.84
CASP4-205ENST00000525116 GPR162Q16538 588 aa9.82□□□□□ -0.84
CASP4-205ENST00000525116 ZNF827Q17R98 1081 aa9.82□□□□□ -0.84
CASP4-205ENST00000525116 RNF19BQ6ZMZ0 732 aa9.82□□□□□ -0.84
CASP4-205ENST00000525116 TMC1Q8TDI8 760 aa9.82□□□□□ -0.84
CASP4-205ENST00000525116 ANKRD24Q8TF21 1146 aa9.82□□□□□ -0.84
CASP4-205ENST00000525116 ROCK2O75116 1388 aaKnown RBP9.82□□□□□ -0.84
CASP4-205ENST00000525116 BRICD5Q6PL45 260 aa9.81□□□□□ -0.84
CASP4-205ENST00000525116 BLOC1S3Q6QNY0 202 aa9.81□□□□□ -0.84
CASP4-205ENST00000525116 SCUBE3Q8IX30 993 aa9.81□□□□□ -0.84
CASP4-205ENST00000525116 DDX54Q8TDD1 881 aaKnown RBP9.81□□□□□ -0.84
CASP4-205ENST00000525116 LRRC4BQ9NT99 713 aa9.81□□□□□ -0.84
CASP4-205ENST00000525116 NHSQ6T4R5 1651 aa9.8□□□□□ -0.84
CASP4-205ENST00000525116 KCNQ4P56696 695 aa9.8□□□□□ -0.84
CASP4-205ENST00000525116 C1QTNF8P60827 252 aa9.8□□□□□ -0.84
CASP4-205ENST00000525116 NYAP1Q6ZVC0 841 aa9.8□□□□□ -0.84
CASP4-205ENST00000525116 LTV1Q96GA3 475 aaPredicted RBP9.8□□□□□ -0.84
CASP4-205ENST00000525116 WBP1LQ9NX94 342 aa9.8□□□□□ -0.84
CASP4-205ENST00000525116 PER1O15534 1290 aaPredicted RBP9.79□□□□□ -0.84
CASP4-205ENST00000525116 IRF5Q13568 498 aa9.79□□□□□ -0.84
CASP4-205ENST00000525116 LYPD8Q6UX82 237 aa9.79□□□□□ -0.84
CASP4-205ENST00000525116 THSD4Q6ZMP0 1018 aa9.79□□□□□ -0.84
CASP4-205ENST00000525116 GLMNQ92990 594 aa9.79□□□□□ -0.84
CASP4-205ENST00000525116 SYTL4Q96C24 671 aaPredicted RBP9.79□□□□□ -0.84
CASP4-205ENST00000525116 BTAF1O14981 1849 aa9.79□□□□□ -0.84
CASP4-205ENST00000525116 GOLGB1Q14789 3259 aaKnown RBP9.79□□□□□ -0.84
CASP4-205ENST00000525116 KAT6BQ8WYB5 2073 aa9.78□□□□□ -0.84
CASP4-205ENST00000525116 ABCC6O95255 1503 aa9.78□□□□□ -0.84
CASP4-205ENST00000525116 POM121CA8CG34 1229 aa9.78□□□□□ -0.84
CASP4-205ENST00000525116 POLD1P28340 1107 aa9.78□□□□□ -0.84
CASP4-205ENST00000525116 NR6A1Q15406 480 aa9.78□□□□□ -0.84
CASP4-205ENST00000525116 HDGFL2Q7Z4V5 671 aaPredicted RBP9.78□□□□□ -0.84
CASP4-205ENST00000525116 SLC12A5Q9H2X9 1139 aa9.78□□□□□ -0.84
CASP4-205ENST00000525116 TFCP2L1Q9NZI6 479 aa9.78□□□□□ -0.84
CASP4-205ENST00000525116 USP31Q70CQ4 1352 aa9.77□□□□□ -0.84
CASP4-205ENST00000525116 JUNDP17535 347 aa9.77□□□□□ -0.85
CASP4-205ENST00000525116 KCTD12Q96CX2 325 aaKnown RBP9.77□□□□□ -0.85
CASP4-205ENST00000525116 KRTAP3-3Q9BYR6 98 aa9.77□□□□□ -0.85
CASP4-205ENST00000525116 KRTAP3-2Q9BYR7 98 aa9.77□□□□□ -0.85
CASP4-205ENST00000525116 CHD4Q14839 1912 aa9.77□□□□□ -0.85
CASP4-205ENST00000525116 LTN1O94822 1766 aa9.77□□□□□ -0.85
CASP4-205ENST00000525116 PAPPAQ13219 1627 aa9.77□□□□□ -0.85
CASP4-205ENST00000525116 SBNO2Q9Y2G9 1366 aa9.76□□□□□ -0.85
CASP4-205ENST00000525116 MON2Q7Z3U7 1717 aa9.76□□□□□ -0.85
CASP4-205ENST00000525116 GIGYF1O75420 1035 aaPredicted RBP9.76□□□□□ -0.85
CASP4-205ENST00000525116 SLC27A3Q5K4L6 730 aa9.76□□□□□ -0.85
CASP4-205ENST00000525116 NLGN2Q8NFZ4 835 aa9.76□□□□□ -0.85
CASP4-205ENST00000525116 EPS8L1Q8TE68 723 aa9.76□□□□□ -0.85
CASP4-205ENST00000525116 THAP11Q96EK4 314 aa9.76□□□□□ -0.85
CASP4-205ENST00000525116 CARD11Q9BXL7 1154 aa9.76□□□□□ -0.85
CASP4-205ENST00000525116 PNPLA7Q6ZV29 1317 aa9.76□□□□□ -0.85
CASP4-205ENST00000525116 MAP3K5Q99683 1374 aa9.75□□□□□ -0.85
CASP4-205ENST00000525116 CD163L1Q9NR16 1453 aa9.75□□□□□ -0.85
CASP4-205ENST00000525116 FBLN1P23142 703 aa9.75□□□□□ -0.85
CASP4-205ENST00000525116 SOX11P35716 441 aa9.75□□□□□ -0.85
CASP4-205ENST00000525116 COPS2P61201 443 aa9.75□□□□□ -0.85
CASP4-205ENST00000525116 VAC14Q08AM6 782 aa9.75□□□□□ -0.85
CASP4-205ENST00000525116 PTPRNQ16849 979 aa9.75□□□□□ -0.85
CASP4-205ENST00000525116 SLC16A10Q8TF71 515 aa9.75□□□□□ -0.85
CASP4-205ENST00000525116 IP6K1Q92551 441 aa9.75□□□□□ -0.85
CASP4-205ENST00000525116 SPSB2Q99619 263 aa9.75□□□□□ -0.85
CASP4-205ENST00000525116 MSS51Q4VC12 460 aa9.74□□□□□ -0.85
CASP4-205ENST00000525116 TERF2IPQ9NYB0 399 aa9.74□□□□□ -0.85
CASP4-205ENST00000525116 GPR37L1O60883 481 aa9.73□□□□□ -0.85
CASP4-205ENST00000525116 HDGFL1Q5TGJ6 251 aa9.73□□□□□ -0.85
CASP4-205ENST00000525116 MSL1Q68DK7 614 aa9.73□□□□□ -0.85
CASP4-205ENST00000525116 CCNL1Q9UK58 526 aaPredicted RBP9.73□□□□□ -0.85
CASP4-205ENST00000525116 EDC4Q6P2E9 1401 aaKnown RBP9.73□□□□□ -0.85
CASP4-205ENST00000525116 YBX3P16989 372 aaKnown RBP eCLIP9.72□□□□□ -0.85
CASP4-205ENST00000525116 CTHP32929 405 aa9.72□□□□□ -0.85
CASP4-205ENST00000525116 AMPHP49418 695 aa9.72□□□□□ -0.85
CASP4-205ENST00000525116 ZCRB1Q8TBF4 217 aaKnown RBP9.72□□□□□ -0.85
CASP4-205ENST00000525116 CEP350Q5VT06 3117 aa9.72□□□□□ -0.85
CASP4-205ENST00000525116 A0A1W2PP64 1363 aa9.72□□□□□ -0.85
CASP4-205ENST00000525116 ANKRD36BQ8N2N9 1353 aa9.72□□□□□ -0.85
CASP4-205ENST00000525116 USP54Q70EL1 1684 aa9.71□□□□□ -0.85
CASP4-205ENST00000525116 CCNYL3P0C7X3 344 aa9.71□□□□□ -0.86
CASP4-205ENST00000525116 HOXC9P31274 260 aa9.71□□□□□ -0.86
CASP4-205ENST00000525116 EIF4G2P78344 907 aaKnown RBP eCLIP9.71□□□□□ -0.86
CASP4-205ENST00000525116 COL23A1Q86Y22 540 aaPredicted RBP9.71□□□□□ -0.86
CASP4-205ENST00000525116 USHBP1Q8N6Y0 703 aa9.71□□□□□ -0.86
CASP4-205ENST00000525116 COG3Q96JB2 828 aa9.71□□□□□ -0.86
CASP4-205ENST00000525116 FKBPLQ9UIM3 349 aa9.71□□□□□ -0.86
CASP4-205ENST00000525116 MAP3K19Q56UN5 1328 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms