RNA–Protein interactions for RNA: ENST00000524650.1

SOX6-204, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-204ENST00000524650 TNRC6CQ9HCJ0 1690 aaKnown RBP8.43□□□□□ -1.06
SOX6-204ENST00000524650 TIAM2Q8IVF5 1701 aa8.43□□□□□ -1.06
SOX6-204ENST00000524650 KLRG2A4D1S0 409 aaPredicted RBP8.43□□□□□ -1.06
SOX6-204ENST00000524650 FKBP4Q02790 459 aaKnown RBP eCLIP8.43□□□□□ -1.06
SOX6-204ENST00000524650 HDGFL1Q5TGJ6 251 aa8.43□□□□□ -1.06
SOX6-204ENST00000524650 GIGYF2Q6Y7W6 1299 aaKnown RBP8.43□□□□□ -1.06
SOX6-204ENST00000524650 ZNF34Q8IZ26 560 aa8.43□□□□□ -1.06
SOX6-204ENST00000524650 SYNE4Q8N205 404 aa8.43□□□□□ -1.06
SOX6-204ENST00000524650 C7orf43Q8WVR3 580 aa8.43□□□□□ -1.06
SOX6-204ENST00000524650 RBM17Q96I25 401 aaKnown RBP8.43□□□□□ -1.06
SOX6-204ENST00000524650 PRKRIP1Q9H875 184 aaPredicted RBP8.43□□□□□ -1.06
SOX6-204ENST00000524650 CHPF2Q9P2E5 772 aa8.43□□□□□ -1.06
SOX6-204ENST00000524650 TRIM35Q9UPQ4 493 aa8.43□□□□□ -1.06
SOX6-204ENST00000524650 CHL1O00533 1208 aa8.42□□□□□ -1.06
SOX6-204ENST00000524650 APAF1O14727 1248 aa8.42□□□□□ -1.06
SOX6-204ENST00000524650 PPEF1O14829 653 aaPredicted RBP8.42□□□□□ -1.06
SOX6-204ENST00000524650 NTSR2O95665 410 aa8.42□□□□□ -1.06
SOX6-204ENST00000524650 PDIA6Q15084 440 aa8.42□□□□□ -1.06
SOX6-204ENST00000524650 PARP10Q53GL7 1025 aa8.42□□□□□ -1.06
SOX6-204ENST00000524650 EAPPQ56P03 285 aaPredicted RBP8.42□□□□□ -1.06
SOX6-204ENST00000524650 HSP90AB3PQ58FF7 597 aa8.42□□□□□ -1.06
SOX6-204ENST00000524650 C3orf67Q6ZVT6 689 aa8.42□□□□□ -1.06
SOX6-204ENST00000524650 NLRP3Q96P20 1036 aa8.42□□□□□ -1.06
SOX6-204ENST00000524650 TRMT112Q9UI30 125 aaKnown RBP8.42□□□□□ -1.06
SOX6-204ENST00000524650 NUP98P52948 1817 aa8.42□□□□□ -1.06
SOX6-204ENST00000524650 FER1L6Q2WGJ9 1857 aa8.42□□□□□ -1.06
SOX6-204ENST00000524650 IQCA1LA6NCM1 817 aa8.41□□□□□ -1.06
SOX6-204ENST00000524650 POTECB2RU33 542 aa8.41□□□□□ -1.06
SOX6-204ENST00000524650 ELL2O00472 640 aaPredicted RBP8.41□□□□□ -1.06
SOX6-204ENST00000524650 HCLS1P14317 486 aaPredicted RBP8.41□□□□□ -1.06
SOX6-204ENST00000524650 IARSP41252 1262 aaKnown RBP8.41□□□□□ -1.06
SOX6-204ENST00000524650 CRY2Q49AN0 593 aa8.41□□□□□ -1.06
SOX6-204ENST00000524650 DNAJC5GQ8N7S2 189 aa8.41□□□□□ -1.06
SOX6-204ENST00000524650 JDP2Q8WYK2 163 aa8.41□□□□□ -1.06
SOX6-204ENST00000524650 DDX21Q9NR30 783 aaKnown RBP eCLIP8.41□□□□□ -1.06
SOX6-204ENST00000524650 CLEC11AQ9Y240 323 aa8.41□□□□□ -1.06
SOX6-204ENST00000524650 GJA3Q9Y6H8 435 aa8.41□□□□□ -1.06
SOX6-204ENST00000524650 ZNF541Q9H0D2 1346 aa8.4□□□□□ -1.06
SOX6-204ENST00000524650 POTEIP0CG38 1075 aa8.4□□□□□ -1.06
SOX6-204ENST00000524650 POTEJP0CG39 1038 aa8.4□□□□□ -1.06
SOX6-204ENST00000524650 HOXA10P31260 410 aaPredicted RBP8.4□□□□□ -1.06
SOX6-204ENST00000524650 TCIRG1Q13488 830 aa8.4□□□□□ -1.06
SOX6-204ENST00000524650 RTL5Q5HYW3 569 aaPredicted RBP8.4□□□□□ -1.06
SOX6-204ENST00000524650 DUSP27Q5VZP5 1158 aa8.4□□□□□ -1.06
SOX6-204ENST00000524650 CC2D2BQ6DHV5 1058 aa8.4□□□□□ -1.06
SOX6-204ENST00000524650 CHADLQ6NUI6 762 aa8.4□□□□□ -1.06
SOX6-204ENST00000524650 LRP10Q7Z4F1 713 aa8.4□□□□□ -1.06
SOX6-204ENST00000524650 NLRP10Q86W26 655 aa8.4□□□□□ -1.06
SOX6-204ENST00000524650 LARGE2Q8N3Y3 721 aa8.4□□□□□ -1.06
SOX6-204ENST00000524650 KLRG1Q96E93 195 aa8.4□□□□□ -1.06
SOX6-204ENST00000524650 CFAP44Q96MT7 982 aa8.4□□□□□ -1.06
SOX6-204ENST00000524650 CRAMP1Q96RY5 1269 aa8.4□□□□□ -1.06
SOX6-204ENST00000524650 MBIPQ9NS73 344 aa8.4□□□□□ -1.06
SOX6-204ENST00000524650 DBF4Q9UBU7 674 aaPredicted RBP8.4□□□□□ -1.06
SOX6-204ENST00000524650 IBTKQ9P2D0 1353 aaPredicted RBP8.39□□□□□ -1.07
SOX6-204ENST00000524650 ATP5J2-PTCD1G3V325 749 aa8.39□□□□□ -1.07
SOX6-204ENST00000524650 EIF6P56537 245 aaKnown RBP8.39□□□□□ -1.07
SOX6-204ENST00000524650 CALD1Q05682 793 aaKnown RBP8.39□□□□□ -1.07
SOX6-204ENST00000524650 ANKRD13DQ6ZTN6 518 aa8.39□□□□□ -1.07
SOX6-204ENST00000524650 DDX46Q7L014 1031 aaKnown RBP8.39□□□□□ -1.07
SOX6-204ENST00000524650 SLC51AQ86UW1 340 aa8.39□□□□□ -1.07
SOX6-204ENST00000524650 PSMD1Q99460 953 aa8.39□□□□□ -1.07
SOX6-204ENST00000524650 TAF1DQ9H5J8 278 aaPredicted RBP8.39□□□□□ -1.07
SOX6-204ENST00000524650 HYPKQ9NX55 129 aa8.39□□□□□ -1.07
SOX6-204ENST00000524650 HACL1Q9UJ83 578 aa8.39□□□□□ -1.07
SOX6-204ENST00000524650 ARFGEF2Q9Y6D5 1785 aa8.39□□□□□ -1.07
SOX6-204ENST00000524650 WDR90Q96KV7 1748 aa8.39□□□□□ -1.07
SOX6-204ENST00000524650 DICER1Q9UPY3 1922 aaKnown RBP8.39□□□□□ -1.07
SOX6-204ENST00000524650 ABCC4O15439 1325 aa8.38□□□□□ -1.07
SOX6-204ENST00000524650 RNF123Q5XPI4 1314 aa8.38□□□□□ -1.07
SOX6-204ENST00000524650 SH3TC1Q8TE82 1336 aa8.38□□□□□ -1.07
SOX6-204ENST00000524650 PPIP5K2O43314 1243 aa8.38□□□□□ -1.07
SOX6-204ENST00000524650 LMOD1P29536 600 aaPredicted RBP8.38□□□□□ -1.07
SOX6-204ENST00000524650 EPHX2P34913 555 aa8.38□□□□□ -1.07
SOX6-204ENST00000524650 GNAI1P63096 354 aa8.38□□□□□ -1.07
SOX6-204ENST00000524650 GRIPAP1Q4V328 841 aa8.38□□□□□ -1.07
SOX6-204ENST00000524650 SLC10A5Q5PT55 438 aa8.38□□□□□ -1.07
SOX6-204ENST00000524650 RIC3Q7Z5B4 369 aa8.38□□□□□ -1.07
SOX6-204ENST00000524650 LDHDQ86WU2 507 aa8.38□□□□□ -1.07
SOX6-204ENST00000524650 NIM1KQ8IY84 436 aa8.38□□□□□ -1.07
SOX6-204ENST00000524650 PLBD2Q8NHP8 589 aa8.38□□□□□ -1.07
SOX6-204ENST00000524650 ATP6V0A2Q9Y487 856 aa8.38□□□□□ -1.07
SOX6-204ENST00000524650 FZD9O00144 591 aa8.37□□□□□ -1.07
SOX6-204ENST00000524650 BBOX1O75936 387 aa8.37□□□□□ -1.07
SOX6-204ENST00000524650 HOXB7P09629 217 aa8.37□□□□□ -1.07
SOX6-204ENST00000524650 ZEB1P37275 1124 aaPredicted RBP8.37□□□□□ -1.07
SOX6-204ENST00000524650 GOLGA2Q08379 1002 aa8.37□□□□□ -1.07
SOX6-204ENST00000524650 AOC3Q16853 763 aa8.37□□□□□ -1.07
SOX6-204ENST00000524650 DPP8Q6V1X1 898 aaPredicted RBP8.37□□□□□ -1.07
SOX6-204ENST00000524650 GPC2Q8N158 579 aa8.37□□□□□ -1.07
SOX6-204ENST00000524650 FAM89AQ96GI7 184 aa8.37□□□□□ -1.07
SOX6-204ENST00000524650 L3MBTL3Q96JM7 780 aaPredicted RBP8.37□□□□□ -1.07
SOX6-204ENST00000524650 IFT57Q9NWB7 429 aa8.37□□□□□ -1.07
SOX6-204ENST00000524650 MKRN1Q9UHC7 482 aaKnown RBP8.37□□□□□ -1.07
SOX6-204ENST00000524650 RIC1Q4ADV7 1423 aa8.37□□□□□ -1.07
SOX6-204ENST00000524650 CCDC184Q52MB2 194 aa8.36□□□□□ -1.07
SOX6-204ENST00000524650 IFFO2Q5TF58 517 aa8.36□□□□□ -1.07
SOX6-204ENST00000524650 MAP1SQ66K74 1059 aaPredicted RBP8.36□□□□□ -1.07
SOX6-204ENST00000524650 PNMA8AQ86V59 439 aaPredicted RBP8.36□□□□□ -1.07
SOX6-204ENST00000524650 MPNDQ8N594 471 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms