RNA–Protein interactions for RNA: ENST00000524627.5

SF3B2-203, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-203ENST00000524627 GPC2Q8N158 579 aa16.89■□□□□ 0.29
SF3B2-203ENST00000524627 PNISRQ8TF01 805 aaKnown RBP16.89■□□□□ 0.29
SF3B2-203ENST00000524627 RPGRQ92834 1020 aaKnown RBP16.89■□□□□ 0.29
SF3B2-203ENST00000524627 EIF4A1P60842 406 aaKnown RBP16.88■□□□□ 0.29
SF3B2-203ENST00000524627 THUMPD2Q9BTF0 503 aaKnown RBP16.88■□□□□ 0.29
SF3B2-203ENST00000524627 ZBTB3Q9H5J0 574 aa16.88■□□□□ 0.29
SF3B2-203ENST00000524627 GJA3Q9Y6H8 435 aa16.88■□□□□ 0.29
SF3B2-203ENST00000524627 UBN2Q6ZU65 1347 aa16.88■□□□□ 0.29
SF3B2-203ENST00000524627 COL4A5P29400 1685 aa16.88■□□□□ 0.29
SF3B2-203ENST00000524627 CTCFP49711 727 aaPredicted RBP16.87■□□□□ 0.29
SF3B2-203ENST00000524627 EIF6P56537 245 aaKnown RBP16.87■□□□□ 0.29
SF3B2-203ENST00000524627 CC2D2BQ6DHV5 1058 aa16.87■□□□□ 0.29
SF3B2-203ENST00000524627 SLC51AQ86UW1 340 aa16.87■□□□□ 0.29
SF3B2-203ENST00000524627 PRDM10Q9NQV6 1147 aa16.87■□□□□ 0.29
SF3B2-203ENST00000524627 TCERG1O14776 1098 aaKnown RBP16.86■□□□□ 0.29
SF3B2-203ENST00000524627 SUSD4Q5VX71 490 aa16.86■□□□□ 0.29
SF3B2-203ENST00000524627 IBTKQ9P2D0 1353 aaPredicted RBP16.86■□□□□ 0.29
SF3B2-203ENST00000524627 RASSF10A6NK89 507 aa16.85■□□□□ 0.29
SF3B2-203ENST00000524627 LMOD1P29536 600 aaPredicted RBP16.85■□□□□ 0.29
SF3B2-203ENST00000524627 HOXA10P31260 410 aaPredicted RBP16.85■□□□□ 0.29
SF3B2-203ENST00000524627 NFE2L2Q16236 605 aa16.85■□□□□ 0.29
SF3B2-203ENST00000524627 DEFB115Q30KQ5 88 aa16.85■□□□□ 0.29
SF3B2-203ENST00000524627 LARGE2Q8N3Y3 721 aa16.85■□□□□ 0.29
SF3B2-203ENST00000524627 RBM17Q96I25 401 aaKnown RBP16.85■□□□□ 0.29
SF3B2-203ENST00000524627 PLEKHF1Q96S99 279 aa16.85■□□□□ 0.29
SF3B2-203ENST00000524627 WBP1LQ9NX94 342 aa16.85■□□□□ 0.29
SF3B2-203ENST00000524627 ABT1Q9ULW3 272 aaKnown RBP16.85■□□□□ 0.29
SF3B2-203ENST00000524627 RIC1Q4ADV7 1423 aa16.85■□□□□ 0.29
SF3B2-203ENST00000524627 LTBP1Q14766 1721 aa16.84■□□□□ 0.29
SF3B2-203ENST00000524627 PPEF1O14829 653 aaPredicted RBP16.84■□□□□ 0.29
SF3B2-203ENST00000524627 ZNF34Q8IZ26 560 aa16.84■□□□□ 0.29
SF3B2-203ENST00000524627 NTSR2O95665 410 aa16.83■□□□□ 0.28
SF3B2-203ENST00000524627 EPS15P42566 896 aa16.83■□□□□ 0.28
SF3B2-203ENST00000524627 LBX1P52954 281 aa16.83■□□□□ 0.28
SF3B2-203ENST00000524627 GRIPAP1Q4V328 841 aa16.83■□□□□ 0.28
SF3B2-203ENST00000524627 C3orf67Q6ZVT6 689 aa16.83■□□□□ 0.28
SF3B2-203ENST00000524627 CRAMP1Q96RY5 1269 aa16.83■□□□□ 0.28
SF3B2-203ENST00000524627 DDX21Q9NR30 783 aaKnown RBP eCLIP16.83■□□□□ 0.28
SF3B2-203ENST00000524627 WDR33Q9C0J8 1336 aaKnown RBP16.82■□□□□ 0.28
SF3B2-203ENST00000524627 MAPK8IP3Q9UPT6 1336 aa16.82■□□□□ 0.28
SF3B2-203ENST00000524627 SCNN1DP51172 638 aa16.82■□□□□ 0.28
SF3B2-203ENST00000524627 GIGYF2Q6Y7W6 1299 aaKnown RBP16.82■□□□□ 0.28
SF3B2-203ENST00000524627 FMR1Q06787 632 aaKnown RBP eCLIP16.81■□□□□ 0.284e-7■■□□□ 12.7
SF3B2-203ENST00000524627 PPP1R42Q7Z4L9 355 aa16.81■□□□□ 0.28
SF3B2-203ENST00000524627 NIM1KQ8IY84 436 aa16.81■□□□□ 0.28
SF3B2-203ENST00000524627 ERBB4Q15303 1308 aa16.8■□□□□ 0.28
SF3B2-203ENST00000524627 PPIP5K2O43314 1243 aa16.8■□□□□ 0.28
SF3B2-203ENST00000524627 PARP10Q53GL7 1025 aa16.8■□□□□ 0.28
SF3B2-203ENST00000524627 PAXIP1Q6ZW49 1069 aaPredicted RBP16.8■□□□□ 0.28
SF3B2-203ENST00000524627 NLRP3Q96P20 1036 aa16.8■□□□□ 0.28
SF3B2-203ENST00000524627 TSPYL4Q9UJ04 414 aa16.8■□□□□ 0.28
SF3B2-203ENST00000524627 HSPA8P11142 646 aaKnown RBP16.79■□□□□ 0.28
SF3B2-203ENST00000524627 EIF2S2P20042 333 aaKnown RBP16.79■□□□□ 0.28
SF3B2-203ENST00000524627 MAP2K1Q02750 393 aaPredicted RBP16.79■□□□□ 0.28
SF3B2-203ENST00000524627 AOC3Q16853 763 aa16.79■□□□□ 0.28
SF3B2-203ENST00000524627 TMX4Q9H1E5 349 aaPredicted RBP16.79■□□□□ 0.28
SF3B2-203ENST00000524627 PNNQ9H307 717 aaKnown RBP16.79■□□□□ 0.28
SF3B2-203ENST00000524627 TRAF5O00463 557 aa16.78■□□□□ 0.28
SF3B2-203ENST00000524627 ANXA1P04083 346 aa16.78■□□□□ 0.28
SF3B2-203ENST00000524627 GRM1Q13255 1194 aa16.78■□□□□ 0.28
SF3B2-203ENST00000524627 PROSER3Q2NL68 480 aa16.78■□□□□ 0.28
SF3B2-203ENST00000524627 USP50Q70EL3 339 aaPredicted RBP16.78■□□□□ 0.28
SF3B2-203ENST00000524627 UTP14AQ9BVJ6 771 aaKnown RBP16.78■□□□□ 0.28
SF3B2-203ENST00000524627 ATP6V0A2Q9Y487 856 aa16.78■□□□□ 0.28
SF3B2-203ENST00000524627 ABCC4O15439 1325 aa16.77■□□□□ 0.28
SF3B2-203ENST00000524627 PDIA6Q15084 440 aa16.77■□□□□ 0.28
SF3B2-203ENST00000524627 LRP10Q7Z4F1 713 aa16.77■□□□□ 0.28
SF3B2-203ENST00000524627 CAPNS2Q96L46 248 aa16.77■□□□□ 0.28
SF3B2-203ENST00000524627 SLC10A5Q5PT55 438 aa16.76■□□□□ 0.27
SF3B2-203ENST00000524627 CST9Q5W186 159 aa16.76■□□□□ 0.27
SF3B2-203ENST00000524627 CYP4F22Q6NT55 531 aa16.76■□□□□ 0.27
SF3B2-203ENST00000524627 NECTIN2Q92692 538 aa16.76■□□□□ 0.27
SF3B2-203ENST00000524627 GPRC5DQ9NZD1 345 aa16.76■□□□□ 0.27
SF3B2-203ENST00000524627 TRPM7Q96QT4 1865 aa16.76■□□□□ 0.27
SF3B2-203ENST00000524627 ECE1P42892 770 aa16.75■□□□□ 0.27
SF3B2-203ENST00000524627 RIPK4P57078 832 aa16.75■□□□□ 0.27
SF3B2-203ENST00000524627 CXCL9Q07325 125 aa16.75■□□□□ 0.27
SF3B2-203ENST00000524627 VPS33BQ9H267 617 aa16.75■□□□□ 0.27
SF3B2-203ENST00000524627 ADARB2Q9NS39 739 aaKnown RBP16.75■□□□□ 0.27
SF3B2-203ENST00000524627 ZNRF3Q9ULT6 936 aa16.75■□□□□ 0.27
SF3B2-203ENST00000524627 THSD7BQ9C0I4 1608 aa16.74■□□□□ 0.27
SF3B2-203ENST00000524627 HCLS1P14317 486 aaPredicted RBP16.74■□□□□ 0.27
SF3B2-203ENST00000524627 AIMP1Q12904 312 aaKnown RBP16.74■□□□□ 0.27
SF3B2-203ENST00000524627 DPP8Q6V1X1 898 aaPredicted RBP16.74■□□□□ 0.27
SF3B2-203ENST00000524627 SUPT20HQ8NEM7 779 aa16.74■□□□□ 0.27
SF3B2-203ENST00000524627 GPR101Q96P66 508 aaPredicted RBP16.74■□□□□ 0.27
SF3B2-203ENST00000524627 BEGAINQ9BUH8 593 aa16.74■□□□□ 0.27
SF3B2-203ENST00000524627 BBOX1O75936 387 aa16.73■□□□□ 0.27
SF3B2-203ENST00000524627 GMPSP49915 693 aaPredicted RBP16.73■□□□□ 0.27
SF3B2-203ENST00000524627 COPS6Q7L5N1 327 aa16.73■□□□□ 0.27
SF3B2-203ENST00000524627 NLRP10Q86W26 655 aa16.73■□□□□ 0.27
SF3B2-203ENST00000524627 XAGE3Q8WTP9 111 aa16.73■□□□□ 0.27
SF3B2-203ENST00000524627 ABHD8Q96I13 439 aa16.73■□□□□ 0.27
SF3B2-203ENST00000524627 RTFDC1Q9BY42 306 aaPredicted RBP16.73■□□□□ 0.27
SF3B2-203ENST00000524627 TLL2Q9Y6L7 1015 aa16.73■□□□□ 0.27
SF3B2-203ENST00000524627 LAMB2P55268 1798 aa16.73■□□□□ 0.27
SF3B2-203ENST00000524627 ANKRD36CQ5JPF3 1778 aa16.73■□□□□ 0.27
SF3B2-203ENST00000524627 HSP90AB3PQ58FF7 597 aa16.72■□□□□ 0.27
SF3B2-203ENST00000524627 SP8Q8IXZ3 490 aa16.72■□□□□ 0.27
SF3B2-203ENST00000524627 MPNDQ8N594 471 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms