RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 PDIA6Q15084 440 aa15.5■□□□□ 0.07
SPARC-206ENST00000524277 SLC10A5Q5PT55 438 aa15.5■□□□□ 0.07
SPARC-206ENST00000524277 PNMA8AQ86V59 439 aaPredicted RBP15.5■□□□□ 0.07
SPARC-206ENST00000524277 VPS33BQ9H267 617 aa15.5■□□□□ 0.07
SPARC-206ENST00000524277 TAF1DQ9H5J8 278 aaPredicted RBP15.5■□□□□ 0.07
SPARC-206ENST00000524277 CREBZFQ9NS37 354 aa15.5■□□□□ 0.07
SPARC-206ENST00000524277 HACL1Q9UJ83 578 aa15.5■□□□□ 0.07
SPARC-206ENST00000524277 NUP98P52948 1817 aa15.5■□□□□ 0.07
SPARC-206ENST00000524277 UBN2Q6ZU65 1347 aa15.49■□□□□ 0.07
SPARC-206ENST00000524277 NTSR2O95665 410 aa15.49■□□□□ 0.07
SPARC-206ENST00000524277 DDX10Q13206 875 aaKnown RBP15.49■□□□□ 0.07
SPARC-206ENST00000524277 WDR43Q15061 677 aaKnown RBP eCLIP15.49■□□□□ 0.07
SPARC-206ENST00000524277 LRP10Q7Z4F1 713 aa15.49■□□□□ 0.07
SPARC-206ENST00000524277 RUNDC1Q96C34 613 aa15.49■□□□□ 0.07
SPARC-206ENST00000524277 UTP14AQ9BVJ6 771 aaKnown RBP15.49■□□□□ 0.07
SPARC-206ENST00000524277 ABCC12Q96J65 1359 aa15.49■□□□□ 0.07
SPARC-206ENST00000524277 SCN4AP35499 1836 aa15.48■□□□□ 0.07
SPARC-206ENST00000524277 CHL1O00533 1208 aa15.48■□□□□ 0.07
SPARC-206ENST00000524277 HOXB7P09629 217 aa15.48■□□□□ 0.07
SPARC-206ENST00000524277 EIF6P56537 245 aaKnown RBP15.48■□□□□ 0.07
SPARC-206ENST00000524277 GPC2Q8N158 579 aa15.48■□□□□ 0.07
SPARC-206ENST00000524277 CACNA1SQ13698 1873 aa15.48■□□□□ 0.07
SPARC-206ENST00000524277 OLFM4Q6UX06 510 aa15.47■□□□□ 0.07
SPARC-206ENST00000524277 DDX21Q9NR30 783 aaKnown RBP eCLIP15.47■□□□□ 0.07
SPARC-206ENST00000524277 PPEF1O14829 653 aaPredicted RBP15.46■□□□□ 0.07
SPARC-206ENST00000524277 COPS6Q7L5N1 327 aa15.46■□□□□ 0.07
SPARC-206ENST00000524277 ZNF541Q9H0D2 1346 aa15.45■□□□□ 0.06
SPARC-206ENST00000524277 SNED1Q8TER0 1413 aa15.45■□□□□ 0.06
SPARC-206ENST00000524277 BBOX1O75936 387 aa15.45■□□□□ 0.06
SPARC-206ENST00000524277 EPHX2P34913 555 aa15.45■□□□□ 0.06
SPARC-206ENST00000524277 TCIRG1Q13488 830 aa15.45■□□□□ 0.06
SPARC-206ENST00000524277 NEUROD2Q15784 382 aa15.45■□□□□ 0.06
SPARC-206ENST00000524277 SUPT20HQ8NEM7 779 aa15.45■□□□□ 0.06
SPARC-206ENST00000524277 PASKQ96RG2 1323 aa15.44■□□□□ 0.06
SPARC-206ENST00000524277 POTEIP0CG38 1075 aa15.44■□□□□ 0.06
SPARC-206ENST00000524277 POTEJP0CG39 1038 aa15.44■□□□□ 0.06
SPARC-206ENST00000524277 LMOD1P29536 600 aaPredicted RBP15.44■□□□□ 0.06
SPARC-206ENST00000524277 EAPPQ56P03 285 aaPredicted RBP15.44■□□□□ 0.06
SPARC-206ENST00000524277 LARGE2Q8N3Y3 721 aa15.44■□□□□ 0.06
SPARC-206ENST00000524277 XAGE3Q8WTP9 111 aa15.44■□□□□ 0.06
SPARC-206ENST00000524277 CLEC11AQ9Y240 323 aa15.44■□□□□ 0.06
SPARC-206ENST00000524277 ATP6V0A2Q9Y487 856 aa15.44■□□□□ 0.06
SPARC-206ENST00000524277 AIMP1Q12904 312 aaKnown RBP15.43■□□□□ 0.06
SPARC-206ENST00000524277 PROSER3Q2NL68 480 aa15.43■□□□□ 0.06
SPARC-206ENST00000524277 TMC4Q7Z404 712 aa15.43■□□□□ 0.06
SPARC-206ENST00000524277 NLRP10Q86W26 655 aa15.43■□□□□ 0.06
SPARC-206ENST00000524277 CCDC146Q8IYE0 955 aa15.43■□□□□ 0.06
SPARC-206ENST00000524277 CFAP44Q96MT7 982 aa15.43■□□□□ 0.06
SPARC-206ENST00000524277 ADAMTS8Q9UP79 889 aa15.43■□□□□ 0.06
SPARC-206ENST00000524277 TRIM35Q9UPQ4 493 aa15.43■□□□□ 0.06
SPARC-206ENST00000524277 TMEM88BA6NKF7 163 aa15.42■□□□□ 0.06
SPARC-206ENST00000524277 ITGBL1O95965 494 aaPredicted RBP15.42■□□□□ 0.06
SPARC-206ENST00000524277 CALD1Q05682 793 aaKnown RBP15.42■□□□□ 0.06
SPARC-206ENST00000524277 SP8Q8IXZ3 490 aa15.42■□□□□ 0.06
SPARC-206ENST00000524277 NIM1KQ8IY84 436 aa15.42■□□□□ 0.06
SPARC-206ENST00000524277 RTFDC1Q9BY42 306 aaPredicted RBP15.42■□□□□ 0.06
SPARC-206ENST00000524277 CHMP4AQ9BY43 222 aa15.42■□□□□ 0.06
SPARC-206ENST00000524277 DBF4Q9UBU7 674 aaPredicted RBP15.42■□□□□ 0.06
SPARC-206ENST00000524277 TRMT112Q9UI30 125 aaKnown RBP15.42■□□□□ 0.06
SPARC-206ENST00000524277 PCNTO95613 3336 aa15.42■□□□□ 0.06
SPARC-206ENST00000524277 SH3TC1Q8TE82 1336 aa15.42■□□□□ 0.06
SPARC-206ENST00000524277 ANXA1P04083 346 aa15.41■□□□□ 0.06
SPARC-206ENST00000524277 HSPA1AP0DMV8 641 aaKnown RBP15.41■□□□□ 0.06
SPARC-206ENST00000524277 HSPA1BP0DMV9 641 aaKnown RBP15.41■□□□□ 0.06
SPARC-206ENST00000524277 HDGFL1Q5TGJ6 251 aa15.41■□□□□ 0.06
SPARC-206ENST00000524277 ANKRD13DQ6ZTN6 518 aa15.41■□□□□ 0.06
SPARC-206ENST00000524277 DDX46Q7L014 1031 aaKnown RBP15.41■□□□□ 0.06
SPARC-206ENST00000524277 PLBD2Q8NHP8 589 aa15.41■□□□□ 0.06
SPARC-206ENST00000524277 HYPKQ9NX55 129 aa15.41■□□□□ 0.06
SPARC-206ENST00000524277 LAS1LQ9Y4W2 734 aaKnown RBP15.41■□□□□ 0.06
SPARC-206ENST00000524277 PPIP5K2O43314 1243 aa15.4■□□□□ 0.06
SPARC-206ENST00000524277 C3orf67Q6ZVT6 689 aa15.4■□□□□ 0.06
SPARC-206ENST00000524277 CNTROBQ8N137 903 aa15.4■□□□□ 0.06
SPARC-206ENST00000524277 NECTIN2Q92692 538 aa15.4■□□□□ 0.06
SPARC-206ENST00000524277 PRKRIP1Q9H875 184 aaPredicted RBP15.4■□□□□ 0.06
SPARC-206ENST00000524277 GJA3Q9Y6H8 435 aa15.4■□□□□ 0.06
SPARC-206ENST00000524277 ABCC4O15439 1325 aa15.4■□□□□ 0.06
SPARC-206ENST00000524277 CNTNAP1P78357 1384 aa15.39■□□□□ 0.05
SPARC-206ENST00000524277 GRAPQ13588 217 aa15.39■□□□□ 0.05
SPARC-206ENST00000524277 COL13A1Q5TAT6 717 aaPredicted RBP15.39■□□□□ 0.05
SPARC-206ENST00000524277 DPP8Q6V1X1 898 aaPredicted RBP15.39■□□□□ 0.05
SPARC-206ENST00000524277 USP50Q70EL3 339 aaPredicted RBP15.39■□□□□ 0.05
SPARC-206ENST00000524277 MPNDQ8N594 471 aa15.39■□□□□ 0.05
SPARC-206ENST00000524277 GRAPLQ8TC17 118 aaPredicted RBP15.39■□□□□ 0.05
SPARC-206ENST00000524277 CHPF2Q9P2E5 772 aa15.39■□□□□ 0.05
SPARC-206ENST00000524277 MKRN1Q9UHC7 482 aaKnown RBP15.39■□□□□ 0.05
SPARC-206ENST00000524277 TCERG1O14776 1098 aaKnown RBP15.38■□□□□ 0.05
SPARC-206ENST00000524277 HCLS1P14317 486 aaPredicted RBP15.38■□□□□ 0.05
SPARC-206ENST00000524277 HSP90B1P14625 803 aaKnown RBP15.38■□□□□ 0.05
SPARC-206ENST00000524277 TRIM28Q13263 835 aaKnown RBP15.38■□□□□ 0.05
SPARC-206ENST00000524277 ZNRF3Q9ULT6 936 aa15.38■□□□□ 0.05
SPARC-206ENST00000524277 GNAI1P63096 354 aa15.37■□□□□ 0.05
SPARC-206ENST00000524277 DUSP27Q5VZP5 1158 aa15.37■□□□□ 0.05
SPARC-206ENST00000524277 TNS4Q8IZW8 715 aa15.37■□□□□ 0.05
SPARC-206ENST00000524277 ISCA1Q9BUE6 129 aa15.37■□□□□ 0.05
SPARC-206ENST00000524277 IFT57Q9NWB7 429 aa15.37■□□□□ 0.05
SPARC-206ENST00000524277 ZNF853P0CG23 659 aa15.36■□□□□ 0.05
SPARC-206ENST00000524277 SCNN1DP51172 638 aa15.36■□□□□ 0.05
SPARC-206ENST00000524277 KIAA2012Q0VF49 1180 aa15.36■□□□□ 0.05
SPARC-206ENST00000524277 TNIP1Q15025 636 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms