RNA–Protein interactions for RNA: ENST00000523004.1

GM2A-202, Transcript of GM2 ganglioside activator, humanhuman

TSL 1 (best)

Gene GM2A, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-202ENST00000523004 ZNF34Q8IZ26 560 aa10.41□□□□□ -0.74
GM2A-202ENST00000523004 PNNQ9H307 717 aaKnown RBP10.41□□□□□ -0.74
GM2A-202ENST00000523004 MKRN1Q9UHC7 482 aaKnown RBP10.41□□□□□ -0.74
GM2A-202ENST00000523004 ADAMTSL1Q8N6G6 1762 aa10.41□□□□□ -0.74
GM2A-202ENST00000523004 CNTNAP1P78357 1384 aa10.4□□□□□ -0.74
GM2A-202ENST00000523004 ERBB4Q15303 1308 aa10.4□□□□□ -0.74
GM2A-202ENST00000523004 GPTP24298 496 aa10.4□□□□□ -0.74
GM2A-202ENST00000523004 EPHX2P34913 555 aa10.4□□□□□ -0.74
GM2A-202ENST00000523004 GRIPAP1Q4V328 841 aa10.4□□□□□ -0.74
GM2A-202ENST00000523004 EAPPQ56P03 285 aaPredicted RBP10.4□□□□□ -0.74
GM2A-202ENST00000523004 SUSD4Q5VX71 490 aa10.4□□□□□ -0.74
GM2A-202ENST00000523004 GIGYF2Q6Y7W6 1299 aaKnown RBP10.4□□□□□ -0.74
GM2A-202ENST00000523004 PNMA8AQ86V59 439 aaPredicted RBP10.4□□□□□ -0.74
GM2A-202ENST00000523004 GPC2Q8N158 579 aa10.4□□□□□ -0.74
GM2A-202ENST00000523004 CNKSR2Q8WXI2 1034 aa10.4□□□□□ -0.74
GM2A-202ENST00000523004 ZBTB3Q9H5J0 574 aa10.4□□□□□ -0.74
GM2A-202ENST00000523004 RNF123Q5XPI4 1314 aa10.39□□□□□ -0.75
GM2A-202ENST00000523004 COL4A5P29400 1685 aa10.39□□□□□ -0.75
GM2A-202ENST00000523004 TMEM88BA6NKF7 163 aa10.39□□□□□ -0.75
GM2A-202ENST00000523004 NTSR2O95665 410 aa10.39□□□□□ -0.75
GM2A-202ENST00000523004 PDIA6Q15084 440 aa10.39□□□□□ -0.75
GM2A-202ENST00000523004 LRP10Q7Z4F1 713 aa10.39□□□□□ -0.75
GM2A-202ENST00000523004 JDP2Q8WYK2 163 aa10.39□□□□□ -0.75
GM2A-202ENST00000523004 RPGRQ92834 1020 aaKnown RBP10.39□□□□□ -0.75
GM2A-202ENST00000523004 CRAMP1Q96RY5 1269 aa10.39□□□□□ -0.75
GM2A-202ENST00000523004 MAPK8IP3Q9UPT6 1336 aa10.38□□□□□ -0.75
GM2A-202ENST00000523004 PARP10Q53GL7 1025 aa10.38□□□□□ -0.75
GM2A-202ENST00000523004 CNTROBQ8N137 903 aa10.38□□□□□ -0.75
GM2A-202ENST00000523004 RBM17Q96I25 401 aaKnown RBP10.38□□□□□ -0.75
GM2A-202ENST00000523004 BABAM1Q9NWV8 329 aa10.38□□□□□ -0.75
GM2A-202ENST00000523004 TSPYL4Q9UJ04 414 aa10.38□□□□□ -0.75
GM2A-202ENST00000523004 CLEC11AQ9Y240 323 aa10.38□□□□□ -0.75
GM2A-202ENST00000523004 PPEF1O14829 653 aaPredicted RBP10.37□□□□□ -0.75
GM2A-202ENST00000523004 CAPN15O75808 1086 aa10.37□□□□□ -0.75
GM2A-202ENST00000523004 VEGFBP49765 207 aa10.37□□□□□ -0.75
GM2A-202ENST00000523004 EIF6P56537 245 aaKnown RBP10.37□□□□□ -0.75
GM2A-202ENST00000523004 SLC10A5Q5PT55 438 aa10.37□□□□□ -0.75
GM2A-202ENST00000523004 MAP1SQ66K74 1059 aaPredicted RBP10.37□□□□□ -0.75
GM2A-202ENST00000523004 C3orf67Q6ZVT6 689 aa10.37□□□□□ -0.75
GM2A-202ENST00000523004 PPP1R42Q7Z4L9 355 aa10.37□□□□□ -0.75
GM2A-202ENST00000523004 LTBP1Q14766 1721 aa10.36□□□□□ -0.75
GM2A-202ENST00000523004 FOXN1O15353 648 aa10.36□□□□□ -0.75
GM2A-202ENST00000523004 SCNN1DP51172 638 aa10.36□□□□□ -0.75
GM2A-202ENST00000523004 RIPK4P57078 832 aa10.36□□□□□ -0.75
GM2A-202ENST00000523004 DIEXFQ68CQ4 756 aaKnown RBP10.36□□□□□ -0.75
GM2A-202ENST00000523004 SLC51AQ86UW1 340 aa10.36□□□□□ -0.75
GM2A-202ENST00000523004 LARGE2Q8N3Y3 721 aa10.36□□□□□ -0.75
GM2A-202ENST00000523004 NLRP3Q96P20 1036 aa10.36□□□□□ -0.75
GM2A-202ENST00000523004 GJA3Q9Y6H8 435 aa10.36□□□□□ -0.75
GM2A-202ENST00000523004 RASSF10A6NK89 507 aa10.35□□□□□ -0.75
GM2A-202ENST00000523004 TCERG1O14776 1098 aaKnown RBP10.35□□□□□ -0.75
GM2A-202ENST00000523004 EIF2S2P20042 333 aaKnown RBP10.35□□□□□ -0.75
GM2A-202ENST00000523004 TMPOP42166 694 aaKnown RBP10.35□□□□□ -0.75
GM2A-202ENST00000523004 EPS15P42566 896 aa10.35□□□□□ -0.75
GM2A-202ENST00000523004 PROSER3Q2NL68 480 aa10.35□□□□□ -0.75
GM2A-202ENST00000523004 UTP14AQ9BVJ6 771 aaKnown RBP10.35□□□□□ -0.75
GM2A-202ENST00000523004 VPS33BQ9H267 617 aa10.35□□□□□ -0.75
GM2A-202ENST00000523004 PRDM10Q9NQV6 1147 aa10.35□□□□□ -0.75
GM2A-202ENST00000523004 WBP1LQ9NX94 342 aa10.35□□□□□ -0.75
GM2A-202ENST00000523004 ATP6V0A2Q9Y487 856 aa10.35□□□□□ -0.75
GM2A-202ENST00000523004 LAMB2P55268 1798 aa10.34□□□□□ -0.75
GM2A-202ENST00000523004 ANKRD36CQ5JPF3 1778 aa10.34□□□□□ -0.75
GM2A-202ENST00000523004 ANXA1P04083 346 aa10.34□□□□□ -0.75
GM2A-202ENST00000523004 LMOD1P29536 600 aaPredicted RBP10.34□□□□□ -0.75
GM2A-202ENST00000523004 LMOD3Q0VAK6 560 aa10.34□□□□□ -0.75
GM2A-202ENST00000523004 RALBP1Q15311 655 aa10.34□□□□□ -0.75
GM2A-202ENST00000523004 DEFB115Q30KQ5 88 aa10.34□□□□□ -0.75
GM2A-202ENST00000523004 NIM1KQ8IY84 436 aa10.34□□□□□ -0.75
GM2A-202ENST00000523004 DDX21Q9NR30 783 aaKnown RBP eCLIP10.34□□□□□ -0.75
GM2A-202ENST00000523004 TRPM7Q96QT4 1865 aa10.34□□□□□ -0.75
GM2A-202ENST00000523004 ABCC4O15439 1325 aa10.33□□□□□ -0.76
GM2A-202ENST00000523004 PPIP5K2O43314 1243 aa10.33□□□□□ -0.76
GM2A-202ENST00000523004 BBOX1O75936 387 aa10.33□□□□□ -0.76
GM2A-202ENST00000523004 CTCFP49711 727 aaPredicted RBP10.33□□□□□ -0.76
GM2A-202ENST00000523004 AOC3Q16853 763 aa10.33□□□□□ -0.76
GM2A-202ENST00000523004 HSP90AB3PQ58FF7 597 aa10.33□□□□□ -0.76
GM2A-202ENST00000523004 USP50Q70EL3 339 aaPredicted RBP10.33□□□□□ -0.76
GM2A-202ENST00000523004 COPS6Q7L5N1 327 aa10.33□□□□□ -0.76
GM2A-202ENST00000523004 NLRP10Q86W26 655 aa10.33□□□□□ -0.76
GM2A-202ENST00000523004 RTFDC1Q9BY42 306 aaPredicted RBP10.33□□□□□ -0.76
GM2A-202ENST00000523004 TMX4Q9H1E5 349 aaPredicted RBP10.33□□□□□ -0.76
GM2A-202ENST00000523004 TAF1P21675 1872 aa10.32□□□□□ -0.76
GM2A-202ENST00000523004 CHL1O00533 1208 aa10.32□□□□□ -0.76
GM2A-202ENST00000523004 NPM3O75607 178 aaKnown RBP10.32□□□□□ -0.76
GM2A-202ENST00000523004 CXCL9Q07325 125 aa10.32□□□□□ -0.76
GM2A-202ENST00000523004 AIMP1Q12904 312 aaKnown RBP10.32□□□□□ -0.76
GM2A-202ENST00000523004 TCIRG1Q13488 830 aa10.32□□□□□ -0.76
GM2A-202ENST00000523004 SP8Q8IXZ3 490 aa10.32□□□□□ -0.76
GM2A-202ENST00000523004 SUPT20HQ8NEM7 779 aa10.32□□□□□ -0.76
GM2A-202ENST00000523004 XAGE3Q8WTP9 111 aa10.32□□□□□ -0.76
GM2A-202ENST00000523004 AIDAQ96BJ3 306 aa10.32□□□□□ -0.76
GM2A-202ENST00000523004 GPRC5DQ9NZD1 345 aa10.32□□□□□ -0.76
GM2A-202ENST00000523004 ZNRF3Q9ULT6 936 aa10.32□□□□□ -0.76
GM2A-202ENST00000523004 WDR33Q9C0J8 1336 aaKnown RBP10.32□□□□□ -0.76
GM2A-202ENST00000523004 HCLS1P14317 486 aaPredicted RBP10.31□□□□□ -0.76
GM2A-202ENST00000523004 MAP2K1Q02750 393 aaPredicted RBP10.31□□□□□ -0.76
GM2A-202ENST00000523004 FMR1Q06787 632 aaKnown RBP eCLIP10.31□□□□□ -0.76
GM2A-202ENST00000523004 KIAA2012Q0VF49 1180 aa10.31□□□□□ -0.76
GM2A-202ENST00000523004 KRT24Q2M2I5 525 aa10.31□□□□□ -0.76
GM2A-202ENST00000523004 CST9Q5W186 159 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms