RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 CAPN15O75808 1086 aa20.3■□□□□ 0.84
MRPS28-209ENST00000522987 DDX10Q13206 875 aaKnown RBP20.3■□□□□ 0.84
MRPS28-209ENST00000522987 RTKN2Q8IZC4 609 aa20.3■□□□□ 0.84
MRPS28-209ENST00000522987 CLEC11AQ9Y240 323 aa20.3■□□□□ 0.84
MRPS28-209ENST00000522987 CRY2Q49AN0 593 aa20.29■□□□□ 0.84
MRPS28-209ENST00000522987 IQCA1LA6NCM1 817 aa20.28■□□□□ 0.84
MRPS28-209ENST00000522987 NTSR2O95665 410 aa20.28■□□□□ 0.84
MRPS28-209ENST00000522987 TMPOP42166 694 aaKnown RBP20.28■□□□□ 0.84
MRPS28-209ENST00000522987 AIMP1Q12904 312 aaKnown RBP20.28■□□□□ 0.84
MRPS28-209ENST00000522987 KRT24Q2M2I5 525 aa20.28■□□□□ 0.84
MRPS28-209ENST00000522987 GIGYF2Q6Y7W6 1299 aaKnown RBP20.28■□□□□ 0.84
MRPS28-209ENST00000522987 ZNF34Q8IZ26 560 aa20.28■□□□□ 0.84
MRPS28-209ENST00000522987 LAS1LQ9Y4W2 734 aaKnown RBP20.28■□□□□ 0.84
MRPS28-209ENST00000522987 GJA3Q9Y6H8 435 aa20.28■□□□□ 0.84
MRPS28-209ENST00000522987 PCNTO95613 3336 aa20.27■□□□□ 0.84
MRPS28-209ENST00000522987 PDIA6Q15084 440 aa20.27■□□□□ 0.84
MRPS28-209ENST00000522987 L3MBTL3Q96JM7 780 aaPredicted RBP20.27■□□□□ 0.84
MRPS28-209ENST00000522987 SNED1Q8TER0 1413 aa20.27■□□□□ 0.83
MRPS28-209ENST00000522987 ADAMTSL1Q8N6G6 1762 aa20.26■□□□□ 0.83
MRPS28-209ENST00000522987 LDHDQ86WU2 507 aa20.26■□□□□ 0.83
MRPS28-209ENST00000522987 HACL1Q9UJ83 578 aa20.26■□□□□ 0.83
MRPS28-209ENST00000522987 LTBP1Q14766 1721 aa20.26■□□□□ 0.83
MRPS28-209ENST00000522987 PPEF1O14829 653 aaPredicted RBP20.25■□□□□ 0.83
MRPS28-209ENST00000522987 EPHX2P34913 555 aa20.25■□□□□ 0.83
MRPS28-209ENST00000522987 RALBP1Q15311 655 aa20.25■□□□□ 0.83
MRPS28-209ENST00000522987 LRP10Q7Z4F1 713 aa20.25■□□□□ 0.83
MRPS28-209ENST00000522987 CREBZFQ9NS37 354 aa20.25■□□□□ 0.83
MRPS28-209ENST00000522987 IBTKQ9P2D0 1353 aaPredicted RBP20.24■□□□□ 0.83
MRPS28-209ENST00000522987 FZD9O00144 591 aa20.24■□□□□ 0.83
MRPS28-209ENST00000522987 MAP1SQ66K74 1059 aaPredicted RBP20.24■□□□□ 0.83
MRPS28-209ENST00000522987 PPP1R42Q7Z4L9 355 aa20.24■□□□□ 0.83
MRPS28-209ENST00000522987 JDP2Q8WYK2 163 aa20.24■□□□□ 0.83
MRPS28-209ENST00000522987 RBM17Q96I25 401 aaKnown RBP20.24■□□□□ 0.83
MRPS28-209ENST00000522987 ERBB4Q15303 1308 aa20.24■□□□□ 0.83
MRPS28-209ENST00000522987 HOXA10P31260 410 aaPredicted RBP20.23■□□□□ 0.83
MRPS28-209ENST00000522987 RIC1Q4ADV7 1423 aa20.23■□□□□ 0.83
MRPS28-209ENST00000522987 COPS6Q7L5N1 327 aa20.23■□□□□ 0.83
MRPS28-209ENST00000522987 TNS4Q8IZW8 715 aa20.23■□□□□ 0.83
MRPS28-209ENST00000522987 LARGE2Q8N3Y3 721 aa20.23■□□□□ 0.83
MRPS28-209ENST00000522987 XAGE3Q8WTP9 111 aa20.23■□□□□ 0.83
MRPS28-209ENST00000522987 PSMD1Q99460 953 aa20.23■□□□□ 0.83
MRPS28-209ENST00000522987 UTP14AQ9BVJ6 771 aaKnown RBP20.22■□□□□ 0.83
MRPS28-209ENST00000522987 PASKQ96RG2 1323 aa20.22■□□□□ 0.83
MRPS28-209ENST00000522987 HCLS1P14317 486 aaPredicted RBP20.21■□□□□ 0.83
MRPS28-209ENST00000522987 EIF6P56537 245 aaKnown RBP20.21■□□□□ 0.83
MRPS28-209ENST00000522987 LMOD3Q0VAK6 560 aa20.21■□□□□ 0.83
MRPS28-209ENST00000522987 PARP10Q53GL7 1025 aa20.21■□□□□ 0.83
MRPS28-209ENST00000522987 NLRP3Q96P20 1036 aa20.21■□□□□ 0.83
MRPS28-209ENST00000522987 CRAMP1Q96RY5 1269 aa20.21■□□□□ 0.83
MRPS28-209ENST00000522987 MYBBP1AQ9BQG0 1328 aaKnown RBP20.21■□□□□ 0.83
MRPS28-209ENST00000522987 DDX60Q8IY21 1712 aaKnown RBP20.2■□□□□ 0.82
MRPS28-209ENST00000522987 ITGBL1O95965 494 aaPredicted RBP20.2■□□□□ 0.82
MRPS28-209ENST00000522987 GPC2Q8N158 579 aa20.2■□□□□ 0.82
MRPS28-209ENST00000522987 ABCC4O15439 1325 aa20.2■□□□□ 0.82
MRPS28-209ENST00000522987 PPIP5K2O43314 1243 aa20.19■□□□□ 0.82
MRPS28-209ENST00000522987 FMR1Q06787 632 aaKnown RBP eCLIP20.19■□□□□ 0.82
MRPS28-209ENST00000522987 WDR43Q15061 677 aaKnown RBP eCLIP20.19■□□□□ 0.82
MRPS28-209ENST00000522987 AOC3Q16853 763 aa20.19■□□□□ 0.82
MRPS28-209ENST00000522987 CC2D2BQ6DHV5 1058 aa20.19■□□□□ 0.82
MRPS28-209ENST00000522987 TRPM7Q96QT4 1865 aa20.19■□□□□ 0.82
MRPS28-209ENST00000522987 CNTNAP1P78357 1384 aa20.19■□□□□ 0.82
MRPS28-209ENST00000522987 TMEM88BA6NKF7 163 aa20.18■□□□□ 0.82
MRPS28-209ENST00000522987 EPS15P42566 896 aa20.18■□□□□ 0.82
MRPS28-209ENST00000522987 NLRP10Q86W26 655 aa20.18■□□□□ 0.82
MRPS28-209ENST00000522987 NIM1KQ8IY84 436 aa20.18■□□□□ 0.82
MRPS28-209ENST00000522987 CNTROBQ8N137 903 aa20.18■□□□□ 0.82
MRPS28-209ENST00000522987 CHPF2Q9P2E5 772 aa20.18■□□□□ 0.82
MRPS28-209ENST00000522987 TRIM35Q9UPQ4 493 aa20.18■□□□□ 0.82
MRPS28-209ENST00000522987 LMOD1P29536 600 aaPredicted RBP20.17■□□□□ 0.82
MRPS28-209ENST00000522987 TRMT112Q9UI30 125 aaKnown RBP20.17■□□□□ 0.82
MRPS28-209ENST00000522987 VEGFBP49765 207 aa20.16■□□□□ 0.82
MRPS28-209ENST00000522987 PNMA8AQ86V59 439 aaPredicted RBP20.16■□□□□ 0.82
MRPS28-209ENST00000522987 RUNDC1Q96C34 613 aa20.16■□□□□ 0.82
MRPS28-209ENST00000522987 ADAMTS8Q9UP79 889 aa20.16■□□□□ 0.82
MRPS28-209ENST00000522987 CHL1O00533 1208 aa20.15■□□□□ 0.82
MRPS28-209ENST00000522987 FOXN1O15353 648 aa20.15■□□□□ 0.82
MRPS28-209ENST00000522987 SCNN1DP51172 638 aa20.15■□□□□ 0.82
MRPS28-209ENST00000522987 RTL5Q5HYW3 569 aaPredicted RBP20.15■□□□□ 0.82
MRPS28-209ENST00000522987 SLC10A5Q5PT55 438 aa20.15■□□□□ 0.82
MRPS28-209ENST00000522987 HDGFL1Q5TGJ6 251 aa20.15■□□□□ 0.82
MRPS28-209ENST00000522987 TMX4Q9H1E5 349 aaPredicted RBP20.15■□□□□ 0.82
MRPS28-209ENST00000522987 DDX21Q9NR30 783 aaKnown RBP eCLIP20.15■□□□□ 0.82
MRPS28-209ENST00000522987 BABAM1Q9NWV8 329 aa20.15■□□□□ 0.82
MRPS28-209ENST00000522987 ATP6V0A2Q9Y487 856 aa20.15■□□□□ 0.82
MRPS28-209ENST00000522987 TCIRG1Q13488 830 aa20.14■□□□□ 0.81
MRPS28-209ENST00000522987 HSP90AB3PQ58FF7 597 aa20.14■□□□□ 0.81
MRPS28-209ENST00000522987 COL4A1P02462 1669 aa20.13■□□□□ 0.81
MRPS28-209ENST00000522987 ATP5J2-PTCD1G3V325 749 aa20.13■□□□□ 0.81
MRPS28-209ENST00000522987 ABT1Q9ULW3 272 aaKnown RBP20.13■□□□□ 0.81
MRPS28-209ENST00000522987 SH3TC1Q8TE82 1336 aa20.12■□□□□ 0.81
MRPS28-209ENST00000522987 TRAF5O00463 557 aa20.12■□□□□ 0.81
MRPS28-209ENST00000522987 GRM1Q13255 1194 aa20.12■□□□□ 0.81
MRPS28-209ENST00000522987 DPP8Q6V1X1 898 aaPredicted RBP20.12■□□□□ 0.81
MRPS28-209ENST00000522987 DDX46Q7L014 1031 aaKnown RBP20.11■□□□□ 0.81
MRPS28-209ENST00000522987 MPNDQ8N594 471 aa20.11■□□□□ 0.81
MRPS28-209ENST00000522987 RAD17O75943 681 aa20.1■□□□□ 0.81
MRPS28-209ENST00000522987 CXCL9Q07325 125 aa20.1■□□□□ 0.81
MRPS28-209ENST00000522987 DEFB115Q30KQ5 88 aa20.1■□□□□ 0.81
MRPS28-209ENST00000522987 GRIPAP1Q4V328 841 aa20.1■□□□□ 0.81
MRPS28-209ENST00000522987 PAXIP1Q6ZW49 1069 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms