RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 COL11A2P13942 1736 aaPredicted RBP13.36□□□□□ -0.27
CTNNA1-235ENST00000522730 BCORQ6W2J9 1755 aa13.35□□□□□ -0.27
CTNNA1-235ENST00000522730 POTECB2RU33 542 aa13.35□□□□□ -0.27
CTNNA1-235ENST00000522730 FKBP4Q02790 459 aaKnown RBP eCLIP13.35□□□□□ -0.27
CTNNA1-235ENST00000522730 SYNE4Q8N205 404 aa13.35□□□□□ -0.27
CTNNA1-235ENST00000522730 RBM17Q96I25 401 aaKnown RBP13.35□□□□□ -0.27
CTNNA1-235ENST00000522730 UTP14AQ9BVJ6 771 aaKnown RBP13.35□□□□□ -0.27
CTNNA1-235ENST00000522730 CCDC88AQ3V6T2 1871 aa13.35□□□□□ -0.27
CTNNA1-235ENST00000522730 LTBP3Q9NS15 1303 aa13.35□□□□□ -0.27
CTNNA1-235ENST00000522730 KDM3BQ7LBC6 1761 aa13.35□□□□□ -0.27
CTNNA1-235ENST00000522730 ABCC12Q96J65 1359 aa13.34□□□□□ -0.27
CTNNA1-235ENST00000522730 APAF1O14727 1248 aa13.34□□□□□ -0.27
CTNNA1-235ENST00000522730 C3orf67Q6ZVT6 689 aa13.34□□□□□ -0.27
CTNNA1-235ENST00000522730 DNAJC5GQ8N7S2 189 aa13.34□□□□□ -0.27
CTNNA1-235ENST00000522730 NLRP3Q96P20 1036 aa13.34□□□□□ -0.27
CTNNA1-235ENST00000522730 CHPF2Q9P2E5 772 aa13.34□□□□□ -0.27
CTNNA1-235ENST00000522730 ELL2O00472 640 aaPredicted RBP13.33□□□□□ -0.28
CTNNA1-235ENST00000522730 NTSR2O95665 410 aa13.33□□□□□ -0.28
CTNNA1-235ENST00000522730 PARP10Q53GL7 1025 aa13.33□□□□□ -0.28
CTNNA1-235ENST00000522730 HDGFL1Q5TGJ6 251 aa13.33□□□□□ -0.28
CTNNA1-235ENST00000522730 TMX4Q9H1E5 349 aaPredicted RBP13.33□□□□□ -0.28
CTNNA1-235ENST00000522730 DDX21Q9NR30 783 aaKnown RBP eCLIP13.33□□□□□ -0.28
CTNNA1-235ENST00000522730 CACNA1SQ13698 1873 aa13.32□□□□□ -0.28
CTNNA1-235ENST00000522730 HCLS1P14317 486 aaPredicted RBP13.32□□□□□ -0.28
CTNNA1-235ENST00000522730 CRY2Q49AN0 593 aa13.32□□□□□ -0.28
CTNNA1-235ENST00000522730 SAMD1Q6SPF0 538 aaPredicted RBP13.32□□□□□ -0.28
CTNNA1-235ENST00000522730 LRP10Q7Z4F1 713 aa13.32□□□□□ -0.28
CTNNA1-235ENST00000522730 TRMT112Q9UI30 125 aaKnown RBP13.32□□□□□ -0.28
CTNNA1-235ENST00000522730 LAMB4A4D0S4 1761 aa13.31□□□□□ -0.28
CTNNA1-235ENST00000522730 PPEF1O14829 653 aaPredicted RBP13.31□□□□□ -0.28
CTNNA1-235ENST00000522730 IARSP41252 1262 aaKnown RBP13.31□□□□□ -0.28
CTNNA1-235ENST00000522730 TCIRG1Q13488 830 aa13.31□□□□□ -0.28
CTNNA1-235ENST00000522730 EAPPQ56P03 285 aaPredicted RBP13.31□□□□□ -0.28
CTNNA1-235ENST00000522730 HSP90AB3PQ58FF7 597 aa13.31□□□□□ -0.28
CTNNA1-235ENST00000522730 DUSP27Q5VZP5 1158 aa13.31□□□□□ -0.28
CTNNA1-235ENST00000522730 SLC51AQ86UW1 340 aa13.31□□□□□ -0.28
CTNNA1-235ENST00000522730 CFAP44Q96MT7 982 aa13.31□□□□□ -0.28
CTNNA1-235ENST00000522730 CLEC11AQ9Y240 323 aa13.31□□□□□ -0.28
CTNNA1-235ENST00000522730 GJA3Q9Y6H8 435 aa13.31□□□□□ -0.28
CTNNA1-235ENST00000522730 NUP98P52948 1817 aa13.3□□□□□ -0.28
CTNNA1-235ENST00000522730 FER1L6Q2WGJ9 1857 aa13.3□□□□□ -0.28
CTNNA1-235ENST00000522730 ATP5J2-PTCD1G3V325 749 aa13.3□□□□□ -0.28
CTNNA1-235ENST00000522730 POTEIP0CG38 1075 aa13.3□□□□□ -0.28
CTNNA1-235ENST00000522730 POTEJP0CG39 1038 aa13.3□□□□□ -0.28
CTNNA1-235ENST00000522730 HOXA10P31260 410 aaPredicted RBP13.3□□□□□ -0.28
CTNNA1-235ENST00000522730 ANKRD13DQ6ZTN6 518 aa13.3□□□□□ -0.28
CTNNA1-235ENST00000522730 NLRP10Q86W26 655 aa13.3□□□□□ -0.28
CTNNA1-235ENST00000522730 JDP2Q8WYK2 163 aa13.3□□□□□ -0.28
CTNNA1-235ENST00000522730 CRAMP1Q96RY5 1269 aa13.3□□□□□ -0.28
CTNNA1-235ENST00000522730 MBIPQ9NS73 344 aa13.3□□□□□ -0.28
CTNNA1-235ENST00000522730 ZNF541Q9H0D2 1346 aa13.3□□□□□ -0.28
CTNNA1-235ENST00000522730 CCDC184Q52MB2 194 aa13.29□□□□□ -0.28
CTNNA1-235ENST00000522730 RTL5Q5HYW3 569 aaPredicted RBP13.29□□□□□ -0.28
CTNNA1-235ENST00000522730 SLC10A5Q5PT55 438 aa13.29□□□□□ -0.28
CTNNA1-235ENST00000522730 CC2D2BQ6DHV5 1058 aa13.29□□□□□ -0.28
CTNNA1-235ENST00000522730 CHADLQ6NUI6 762 aa13.29□□□□□ -0.28
CTNNA1-235ENST00000522730 LARGE2Q8N3Y3 721 aa13.29□□□□□ -0.28
CTNNA1-235ENST00000522730 KLRG1Q96E93 195 aa13.29□□□□□ -0.28
CTNNA1-235ENST00000522730 DBF4Q9UBU7 674 aaPredicted RBP13.29□□□□□ -0.28
CTNNA1-235ENST00000522730 TNRC6CQ9HCJ0 1690 aaKnown RBP13.28□□□□□ -0.28
CTNNA1-235ENST00000522730 TIAM2Q8IVF5 1701 aa13.28□□□□□ -0.28
CTNNA1-235ENST00000522730 IQCA1LA6NCM1 817 aa13.28□□□□□ -0.28
CTNNA1-235ENST00000522730 EIF6P56537 245 aaKnown RBP13.28□□□□□ -0.28
CTNNA1-235ENST00000522730 GNAI1P63096 354 aa13.27□□□□□ -0.29
CTNNA1-235ENST00000522730 CALD1Q05682 793 aaKnown RBP13.27□□□□□ -0.29
CTNNA1-235ENST00000522730 DDX46Q7L014 1031 aaKnown RBP13.27□□□□□ -0.29
CTNNA1-235ENST00000522730 RIC3Q7Z5B4 369 aa13.27□□□□□ -0.29
CTNNA1-235ENST00000522730 PLBD2Q8NHP8 589 aa13.27□□□□□ -0.29
CTNNA1-235ENST00000522730 PSMD1Q99460 953 aa13.27□□□□□ -0.29
CTNNA1-235ENST00000522730 TAF1DQ9H5J8 278 aaPredicted RBP13.27□□□□□ -0.29
CTNNA1-235ENST00000522730 HYPKQ9NX55 129 aa13.27□□□□□ -0.29
CTNNA1-235ENST00000522730 HACL1Q9UJ83 578 aa13.27□□□□□ -0.29
CTNNA1-235ENST00000522730 SH3TC1Q8TE82 1336 aa13.27□□□□□ -0.29
CTNNA1-235ENST00000522730 FZD9O00144 591 aa13.26□□□□□ -0.29
CTNNA1-235ENST00000522730 ABCC4O15439 1325 aa13.26□□□□□ -0.29
CTNNA1-235ENST00000522730 RNF123Q5XPI4 1314 aa13.26□□□□□ -0.29
CTNNA1-235ENST00000522730 C8orf58Q8NAV2 365 aa13.26□□□□□ -0.29
CTNNA1-235ENST00000522730 FAM89AQ96GI7 184 aa13.26□□□□□ -0.29
CTNNA1-235ENST00000522730 IFT57Q9NWB7 429 aa13.26□□□□□ -0.29
CTNNA1-235ENST00000522730 IBTKQ9P2D0 1353 aaPredicted RBP13.26□□□□□ -0.29
CTNNA1-235ENST00000522730 ATP6V0A2Q9Y487 856 aa13.26□□□□□ -0.29
CTNNA1-235ENST00000522730 PCNTO95613 3336 aa13.25□□□□□ -0.29
CTNNA1-235ENST00000522730 ZNF316A6NFI3 1004 aaPredicted RBP13.25□□□□□ -0.29
CTNNA1-235ENST00000522730 PPIP5K2O43314 1243 aa13.25□□□□□ -0.29
CTNNA1-235ENST00000522730 BBOX1O75936 387 aa13.25□□□□□ -0.29
CTNNA1-235ENST00000522730 HOXB7P09629 217 aa13.25□□□□□ -0.29
CTNNA1-235ENST00000522730 ZNF853P0CG23 659 aa13.25□□□□□ -0.29
CTNNA1-235ENST00000522730 EPHX2P34913 555 aa13.25□□□□□ -0.29
CTNNA1-235ENST00000522730 AOC3Q16853 763 aa13.25□□□□□ -0.29
CTNNA1-235ENST00000522730 GRIPAP1Q4V328 841 aa13.25□□□□□ -0.29
CTNNA1-235ENST00000522730 DPP8Q6V1X1 898 aaPredicted RBP13.25□□□□□ -0.29
CTNNA1-235ENST00000522730 NIM1KQ8IY84 436 aa13.25□□□□□ -0.29
CTNNA1-235ENST00000522730 PHAXQ9H814 394 aaKnown RBP13.25□□□□□ -0.29
CTNNA1-235ENST00000522730 SALL2Q9Y467 1007 aaPredicted RBP13.25□□□□□ -0.29
CTNNA1-235ENST00000522730 DICER1Q9UPY3 1922 aaKnown RBP13.25□□□□□ -0.29
CTNNA1-235ENST00000522730 GOLGA2Q08379 1002 aa13.24□□□□□ -0.29
CTNNA1-235ENST00000522730 LDHDQ86WU2 507 aa13.24□□□□□ -0.29
CTNNA1-235ENST00000522730 GPC2Q8N158 579 aa13.24□□□□□ -0.29
CTNNA1-235ENST00000522730 MPNDQ8N594 471 aa13.24□□□□□ -0.29
CTNNA1-235ENST00000522730 JARID2Q92833 1246 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms