RNA–Protein interactions for RNA: ENST00000520802.5

EFCAB13-209, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 568 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-209ENST00000520802 PCNTO95613 3336 aa23.19■■□□□ 1.3
EFCAB13-209ENST00000520802 RBM17Q96I25 401 aaKnown RBP23.18■■□□□ 1.3
EFCAB13-209ENST00000520802 TMX4Q9H1E5 349 aaPredicted RBP23.18■■□□□ 1.3
EFCAB13-209ENST00000520802 GJA3Q9Y6H8 435 aa23.18■■□□□ 1.3
EFCAB13-209ENST00000520802 ITGBL1O95965 494 aaPredicted RBP23.17■■□□□ 1.3
EFCAB13-209ENST00000520802 LMOD1P29536 600 aaPredicted RBP23.17■■□□□ 1.3
EFCAB13-209ENST00000520802 GRIPAP1Q4V328 841 aa23.17■■□□□ 1.3
EFCAB13-209ENST00000520802 TCERG1O14776 1098 aaKnown RBP23.16■■□□□ 1.3
EFCAB13-209ENST00000520802 SUSD4Q5VX71 490 aa23.16■■□□□ 1.3
EFCAB13-209ENST00000520802 MAP1SQ66K74 1059 aaPredicted RBP23.16■■□□□ 1.3
EFCAB13-209ENST00000520802 PPP1R42Q7Z4L9 355 aa23.16■■□□□ 1.3
EFCAB13-209ENST00000520802 CNTROBQ8N137 903 aa23.16■■□□□ 1.3
EFCAB13-209ENST00000520802 PLEKHF1Q96S99 279 aa23.16■■□□□ 1.3
EFCAB13-209ENST00000520802 LARGE2Q8N3Y3 721 aa23.15■■□□□ 1.3
EFCAB13-209ENST00000520802 TSPYL4Q9UJ04 414 aa23.15■■□□□ 1.3
EFCAB13-209ENST00000520802 UBN2Q6ZU65 1347 aa23.14■■□□□ 1.3
EFCAB13-209ENST00000520802 PPEF1O14829 653 aaPredicted RBP23.14■■□□□ 1.29
EFCAB13-209ENST00000520802 HOXA10P31260 410 aaPredicted RBP23.14■■□□□ 1.29
EFCAB13-209ENST00000520802 VEGFBP49765 207 aa23.14■■□□□ 1.29
EFCAB13-209ENST00000520802 KDM3BQ7LBC6 1761 aa23.14■■□□□ 1.29
EFCAB13-209ENST00000520802 DLG5Q8TDM6 1919 aa23.14■■□□□ 1.29
EFCAB13-209ENST00000520802 IBTKQ9P2D0 1353 aaPredicted RBP23.14■■□□□ 1.29
EFCAB13-209ENST00000520802 NUP98P52948 1817 aa23.13■■□□□ 1.29
EFCAB13-209ENST00000520802 FOXN1O15353 648 aa23.13■■□□□ 1.29
EFCAB13-209ENST00000520802 GIGYF2Q6Y7W6 1299 aaKnown RBP23.13■■□□□ 1.29
EFCAB13-209ENST00000520802 CRAMP1Q96RY5 1269 aa23.13■■□□□ 1.29
EFCAB13-209ENST00000520802 ERBB4Q15303 1308 aa23.12■■□□□ 1.29
EFCAB13-209ENST00000520802 EIF2S2P20042 333 aaKnown RBP23.12■■□□□ 1.29
EFCAB13-209ENST00000520802 PARP10Q53GL7 1025 aa23.12■■□□□ 1.29
EFCAB13-209ENST00000520802 ZNF34Q8IZ26 560 aa23.12■■□□□ 1.29
EFCAB13-209ENST00000520802 NLRP3Q96P20 1036 aa23.12■■□□□ 1.29
EFCAB13-209ENST00000520802 ABT1Q9ULW3 272 aaKnown RBP23.12■■□□□ 1.29
EFCAB13-209ENST00000520802 CTCFP49711 727 aaPredicted RBP23.11■■□□□ 1.29
EFCAB13-209ENST00000520802 DEFB115Q30KQ5 88 aa23.11■■□□□ 1.29
EFCAB13-209ENST00000520802 NIM1KQ8IY84 436 aa23.11■■□□□ 1.29
EFCAB13-209ENST00000520802 RIC1Q4ADV7 1423 aa23.1■■□□□ 1.29
EFCAB13-209ENST00000520802 NTSR2O95665 410 aa23.1■■□□□ 1.29
EFCAB13-209ENST00000520802 RIPK4P57078 832 aa23.09■■□□□ 1.29
EFCAB13-209ENST00000520802 UTP14AQ9BVJ6 771 aaKnown RBP23.09■■□□□ 1.29
EFCAB13-209ENST00000520802 PRDM10Q9NQV6 1147 aa23.09■■□□□ 1.29
EFCAB13-209ENST00000520802 PPIP5K2O43314 1243 aa23.08■■□□□ 1.29
EFCAB13-209ENST00000520802 SNED1Q8TER0 1413 aa23.08■■□□□ 1.28
EFCAB13-209ENST00000520802 PAXIP1Q6ZW49 1069 aaPredicted RBP23.07■■□□□ 1.28
EFCAB13-209ENST00000520802 RASSF10A6NK89 507 aa23.06■■□□□ 1.28
EFCAB13-209ENST00000520802 EPS15P42566 896 aa23.06■■□□□ 1.28
EFCAB13-209ENST00000520802 LMOD3Q0VAK6 560 aa23.06■■□□□ 1.28
EFCAB13-209ENST00000520802 C3orf67Q6ZVT6 689 aa23.06■■□□□ 1.28
EFCAB13-209ENST00000520802 DDX21Q9NR30 783 aaKnown RBP eCLIP23.06■■□□□ 1.28
EFCAB13-209ENST00000520802 ADAMTSL1Q8N6G6 1762 aa23.06■■□□□ 1.28
EFCAB13-209ENST00000520802 SCNN1DP51172 638 aa23.05■■□□□ 1.28
EFCAB13-209ENST00000520802 AOC3Q16853 763 aa23.05■■□□□ 1.28
EFCAB13-209ENST00000520802 USP50Q70EL3 339 aaPredicted RBP23.05■■□□□ 1.28
EFCAB13-209ENST00000520802 SUPT20HQ8NEM7 779 aa23.05■■□□□ 1.28
EFCAB13-209ENST00000520802 WBP1LQ9NX94 342 aa23.05■■□□□ 1.28
EFCAB13-209ENST00000520802 ATP6V0A2Q9Y487 856 aa23.05■■□□□ 1.28
EFCAB13-209ENST00000520802 WDR33Q9C0J8 1336 aaKnown RBP23.05■■□□□ 1.28
EFCAB13-209ENST00000520802 ANXA1P04083 346 aa23.04■■□□□ 1.28
EFCAB13-209ENST00000520802 MAP2K1Q02750 393 aaPredicted RBP23.04■■□□□ 1.28
EFCAB13-209ENST00000520802 AIMP1Q12904 312 aaKnown RBP23.04■■□□□ 1.28
EFCAB13-209ENST00000520802 HSP90AB3PQ58FF7 597 aa23.04■■□□□ 1.28
EFCAB13-209ENST00000520802 NECTIN2Q92692 538 aa23.04■■□□□ 1.28
EFCAB13-209ENST00000520802 COL4A5P29400 1685 aa23.03■■□□□ 1.28
EFCAB13-209ENST00000520802 LBX1P52954 281 aa23.03■■□□□ 1.28
EFCAB13-209ENST00000520802 SLC10A5Q5PT55 438 aa23.03■■□□□ 1.28
EFCAB13-209ENST00000520802 SLC51AQ86UW1 340 aa23.03■■□□□ 1.28
EFCAB13-209ENST00000520802 VPS33BQ9H267 617 aa23.03■■□□□ 1.28
EFCAB13-209ENST00000520802 BABAM1Q9NWV8 329 aa23.03■■□□□ 1.28
EFCAB13-209ENST00000520802 GRM1Q13255 1194 aa23.02■■□□□ 1.28
EFCAB13-209ENST00000520802 PDIA6Q15084 440 aa23.02■■□□□ 1.28
EFCAB13-209ENST00000520802 PROSER3Q2NL68 480 aa23.02■■□□□ 1.28
EFCAB13-209ENST00000520802 DPP8Q6V1X1 898 aaPredicted RBP23.02■■□□□ 1.28
EFCAB13-209ENST00000520802 ABCC4O15439 1325 aa23.02■■□□□ 1.28
EFCAB13-209ENST00000520802 BBOX1O75936 387 aa23.01■■□□□ 1.27
EFCAB13-209ENST00000520802 COPS6Q7L5N1 327 aa23.01■■□□□ 1.27
EFCAB13-209ENST00000520802 ZNRF3Q9ULT6 936 aa23.01■■□□□ 1.27
EFCAB13-209ENST00000520802 TMPOP42166 694 aaKnown RBP23■■□□□ 1.27
EFCAB13-209ENST00000520802 ECE1P42892 770 aa23■■□□□ 1.27
EFCAB13-209ENST00000520802 DDX46Q7L014 1031 aaKnown RBP23■■□□□ 1.27
EFCAB13-209ENST00000520802 LRP10Q7Z4F1 713 aa23■■□□□ 1.27
EFCAB13-209ENST00000520802 XAGE3Q8WTP9 111 aa23■■□□□ 1.27
EFCAB13-209ENST00000520802 BEGAINQ9BUH8 593 aa23■■□□□ 1.27
EFCAB13-209ENST00000520802 ADARB2Q9NS39 739 aaKnown RBP23■■□□□ 1.27
EFCAB13-209ENST00000520802 TRMT112Q9UI30 125 aaKnown RBP23■■□□□ 1.27
EFCAB13-209ENST00000520802 HCLS1P14317 486 aaPredicted RBP22.99■■□□□ 1.27
EFCAB13-209ENST00000520802 RALBP1Q15311 655 aa22.99■■□□□ 1.27
EFCAB13-209ENST00000520802 NEUROD2Q15784 382 aa22.99■■□□□ 1.27
EFCAB13-209ENST00000520802 SP8Q8IXZ3 490 aa22.99■■□□□ 1.27
EFCAB13-209ENST00000520802 MPNDQ8N594 471 aa22.99■■□□□ 1.27
EFCAB13-209ENST00000520802 GPRC5DQ9NZD1 345 aa22.99■■□□□ 1.27
EFCAB13-209ENST00000520802 LAS1LQ9Y4W2 734 aaKnown RBP22.99■■□□□ 1.27
EFCAB13-209ENST00000520802 FMR1Q06787 632 aaKnown RBP eCLIP22.98■■□□□ 1.27
EFCAB13-209ENST00000520802 NLRP10Q86W26 655 aa22.98■■□□□ 1.27
EFCAB13-209ENST00000520802 BCL2L13Q9BXK5 485 aa22.98■■□□□ 1.27
EFCAB13-209ENST00000520802 LTBP1Q14766 1721 aa22.97■■□□□ 1.27
EFCAB13-209ENST00000520802 TRAF5O00463 557 aa22.97■■□□□ 1.27
EFCAB13-209ENST00000520802 CXCL9Q07325 125 aa22.97■■□□□ 1.27
EFCAB13-209ENST00000520802 TCIRG1Q13488 830 aa22.97■■□□□ 1.27
EFCAB13-209ENST00000520802 CAPNS2Q96L46 248 aa22.97■■□□□ 1.27
EFCAB13-209ENST00000520802 SH3TC1Q8TE82 1336 aa22.97■■□□□ 1.27
EFCAB13-209ENST00000520802 HSPA8P11142 646 aaKnown RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms