RNA–Protein interactions for RNA: ENST00000519414.5

CHMP7-204, Transcript of charged multivesicular body protein 7, humanhuman

TSL 3

Gene CHMP7, Length 914 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-204ENST00000519414 TMEM88BA6NKF7 163 aa25.42■■□□□ 1.66
CHMP7-204ENST00000519414 GPTP24298 496 aa25.42■■□□□ 1.66
CHMP7-204ENST00000519414 GRIPAP1Q4V328 841 aa25.42■■□□□ 1.66
CHMP7-204ENST00000519414 ZBTB3Q9H5J0 574 aa25.42■■□□□ 1.66
CHMP7-204ENST00000519414 RIC1Q4ADV7 1423 aa25.42■■□□□ 1.66
CHMP7-204ENST00000519414 KDM3BQ7LBC6 1761 aa25.41■■□□□ 1.66
CHMP7-204ENST00000519414 ERBB4Q15303 1308 aa25.41■■□□□ 1.66
CHMP7-204ENST00000519414 RNF123Q5XPI4 1314 aa25.41■■□□□ 1.66
CHMP7-204ENST00000519414 UBN2Q6ZU65 1347 aa25.41■■□□□ 1.66
CHMP7-204ENST00000519414 MAPK8IP3Q9UPT6 1336 aa25.41■■□□□ 1.66
CHMP7-204ENST00000519414 SUSD4Q5VX71 490 aa25.41■■□□□ 1.66
CHMP7-204ENST00000519414 ZNF34Q8IZ26 560 aa25.41■■□□□ 1.66
CHMP7-204ENST00000519414 EIF6P56537 245 aaKnown RBP25.39■■□□□ 1.66
CHMP7-204ENST00000519414 GIGYF2Q6Y7W6 1299 aaKnown RBP25.39■■□□□ 1.66
CHMP7-204ENST00000519414 RBM17Q96I25 401 aaKnown RBP25.39■■□□□ 1.66
CHMP7-204ENST00000519414 CRAMP1Q96RY5 1269 aa25.39■■□□□ 1.66
CHMP7-204ENST00000519414 NTSR2O95665 410 aa25.38■■□□□ 1.65
CHMP7-204ENST00000519414 CNTROBQ8N137 903 aa25.38■■□□□ 1.65
CHMP7-204ENST00000519414 PPP1R42Q7Z4L9 355 aa25.37■■□□□ 1.65
CHMP7-204ENST00000519414 DLG5Q8TDM6 1919 aa25.36■■□□□ 1.65
CHMP7-204ENST00000519414 VEGFBP49765 207 aa25.36■■□□□ 1.65
CHMP7-204ENST00000519414 PARP10Q53GL7 1025 aa25.36■■□□□ 1.65
CHMP7-204ENST00000519414 MAP1SQ66K74 1059 aaPredicted RBP25.36■■□□□ 1.65
CHMP7-204ENST00000519414 TSPYL4Q9UJ04 414 aa25.36■■□□□ 1.65
CHMP7-204ENST00000519414 NUP98P52948 1817 aa25.35■■□□□ 1.65
CHMP7-204ENST00000519414 PPEF1O14829 653 aaPredicted RBP25.35■■□□□ 1.65
CHMP7-204ENST00000519414 LARGE2Q8N3Y3 721 aa25.35■■□□□ 1.65
CHMP7-204ENST00000519414 GJA3Q9Y6H8 435 aa25.35■■□□□ 1.65
CHMP7-204ENST00000519414 ADAMTSL1Q8N6G6 1762 aa25.35■■□□□ 1.65
CHMP7-204ENST00000519414 FOXN1O15353 648 aa25.34■■□□□ 1.65
CHMP7-204ENST00000519414 NLRP3Q96P20 1036 aa25.34■■□□□ 1.65
CHMP7-204ENST00000519414 LMOD1P29536 600 aaPredicted RBP25.33■■□□□ 1.65
CHMP7-204ENST00000519414 PDIA6Q15084 440 aa25.33■■□□□ 1.65
CHMP7-204ENST00000519414 C3orf67Q6ZVT6 689 aa25.33■■□□□ 1.65
CHMP7-204ENST00000519414 LRP10Q7Z4F1 713 aa25.33■■□□□ 1.65
CHMP7-204ENST00000519414 BABAM1Q9NWV8 329 aa25.33■■□□□ 1.65
CHMP7-204ENST00000519414 EIF2S2P20042 333 aaKnown RBP25.32■■□□□ 1.64
CHMP7-204ENST00000519414 RIPK4P57078 832 aa25.32■■□□□ 1.64
CHMP7-204ENST00000519414 SLC10A5Q5PT55 438 aa25.32■■□□□ 1.64
CHMP7-204ENST00000519414 AIDAQ96BJ3 306 aa25.32■■□□□ 1.64
CHMP7-204ENST00000519414 TMX4Q9H1E5 349 aaPredicted RBP25.32■■□□□ 1.64
CHMP7-204ENST00000519414 PRDM10Q9NQV6 1147 aa25.32■■□□□ 1.64
CHMP7-204ENST00000519414 COL4A5P29400 1685 aa25.32■■□□□ 1.64
CHMP7-204ENST00000519414 RASSF10A6NK89 507 aa25.31■■□□□ 1.64
CHMP7-204ENST00000519414 TCERG1O14776 1098 aaKnown RBP25.31■■□□□ 1.64
CHMP7-204ENST00000519414 DEFB115Q30KQ5 88 aa25.31■■□□□ 1.64
CHMP7-204ENST00000519414 UTP14AQ9BVJ6 771 aaKnown RBP25.31■■□□□ 1.64
CHMP7-204ENST00000519414 CTCFP49711 727 aaPredicted RBP25.3■■□□□ 1.64
CHMP7-204ENST00000519414 SCNN1DP51172 638 aa25.3■■□□□ 1.64
CHMP7-204ENST00000519414 NIM1KQ8IY84 436 aa25.3■■□□□ 1.64
CHMP7-204ENST00000519414 VPS33BQ9H267 617 aa25.3■■□□□ 1.64
CHMP7-204ENST00000519414 SLC51AQ86UW1 340 aa25.29■■□□□ 1.64
CHMP7-204ENST00000519414 WBP1LQ9NX94 342 aa25.29■■□□□ 1.64
CHMP7-204ENST00000519414 ATP6V0A2Q9Y487 856 aa25.29■■□□□ 1.64
CHMP7-204ENST00000519414 EPS15P42566 896 aa25.28■■□□□ 1.64
CHMP7-204ENST00000519414 DDX21Q9NR30 783 aaKnown RBP eCLIP25.28■■□□□ 1.64
CHMP7-204ENST00000519414 PPIP5K2O43314 1243 aa25.27■■□□□ 1.64
CHMP7-204ENST00000519414 LMOD3Q0VAK6 560 aa25.27■■□□□ 1.64
CHMP7-204ENST00000519414 PROSER3Q2NL68 480 aa25.27■■□□□ 1.64
CHMP7-204ENST00000519414 USP50Q70EL3 339 aaPredicted RBP25.27■■□□□ 1.64
CHMP7-204ENST00000519414 ABT1Q9ULW3 272 aaKnown RBP25.27■■□□□ 1.64
CHMP7-204ENST00000519414 ZNF316A6NFI3 1004 aaPredicted RBP25.26■■□□□ 1.63
CHMP7-204ENST00000519414 RALBP1Q15311 655 aa25.26■■□□□ 1.63
CHMP7-204ENST00000519414 HSP90AB3PQ58FF7 597 aa25.26■■□□□ 1.63
CHMP7-204ENST00000519414 SUPT20HQ8NEM7 779 aa25.26■■□□□ 1.63
CHMP7-204ENST00000519414 BBOX1O75936 387 aa25.25■■□□□ 1.63
CHMP7-204ENST00000519414 ANXA1P04083 346 aa25.25■■□□□ 1.63
CHMP7-204ENST00000519414 TMPOP42166 694 aaKnown RBP25.25■■□□□ 1.63
CHMP7-204ENST00000519414 AOC3Q16853 763 aa25.25■■□□□ 1.63
CHMP7-204ENST00000519414 RTFDC1Q9BY42 306 aaPredicted RBP25.25■■□□□ 1.63
CHMP7-204ENST00000519414 ABCC4O15439 1325 aa25.25■■□□□ 1.63
CHMP7-204ENST00000519414 WDR33Q9C0J8 1336 aaKnown RBP25.24■■□□□ 1.63
CHMP7-204ENST00000519414 COPS6Q7L5N1 327 aa25.24■■□□□ 1.63
CHMP7-204ENST00000519414 LTBP1Q14766 1721 aa25.23■■□□□ 1.63
CHMP7-204ENST00000519414 NLRP10Q86W26 655 aa25.23■■□□□ 1.63
CHMP7-204ENST00000519414 SP8Q8IXZ3 490 aa25.23■■□□□ 1.63
CHMP7-204ENST00000519414 ZNRF3Q9ULT6 936 aa25.23■■□□□ 1.63
CHMP7-204ENST00000519414 MAP2K1Q02750 393 aaPredicted RBP25.22■■□□□ 1.63
CHMP7-204ENST00000519414 AIMP1Q12904 312 aaKnown RBP25.22■■□□□ 1.63
CHMP7-204ENST00000519414 XAGE3Q8WTP9 111 aa25.22■■□□□ 1.63
CHMP7-204ENST00000519414 LBX1P52954 281 aa25.21■■□□□ 1.63
CHMP7-204ENST00000519414 TCIRG1Q13488 830 aa25.21■■□□□ 1.63
CHMP7-204ENST00000519414 DPP8Q6V1X1 898 aaPredicted RBP25.21■■□□□ 1.63
CHMP7-204ENST00000519414 NECTIN2Q92692 538 aa25.21■■□□□ 1.63
CHMP7-204ENST00000519414 ADARB2Q9NS39 739 aaKnown RBP25.21■■□□□ 1.63
CHMP7-204ENST00000519414 GPRC5DQ9NZD1 345 aa25.21■■□□□ 1.63
CHMP7-204ENST00000519414 HCLS1P14317 486 aaPredicted RBP25.2■■□□□ 1.62
CHMP7-204ENST00000519414 CXCL9Q07325 125 aa25.2■■□□□ 1.62
CHMP7-204ENST00000519414 MPNDQ8N594 471 aa25.2■■□□□ 1.62
CHMP7-204ENST00000519414 TRMT112Q9UI30 125 aaKnown RBP25.2■■□□□ 1.62
CHMP7-204ENST00000519414 FMR1Q06787 632 aaKnown RBP eCLIP25.19■■□□□ 1.62
CHMP7-204ENST00000519414 DDX46Q7L014 1031 aaKnown RBP25.19■■□□□ 1.62
CHMP7-204ENST00000519414 SH3TC1Q8TE82 1336 aa25.18■■□□□ 1.62
CHMP7-204ENST00000519414 CHL1O00533 1208 aa25.18■■□□□ 1.62
CHMP7-204ENST00000519414 KIAA2012Q0VF49 1180 aa25.18■■□□□ 1.62
CHMP7-204ENST00000519414 TRAF5O00463 557 aa25.17■■□□□ 1.62
CHMP7-204ENST00000519414 HSPA8P11142 646 aaKnown RBP25.17■■□□□ 1.62
CHMP7-204ENST00000519414 ECE1P42892 770 aa25.17■■□□□ 1.62
CHMP7-204ENST00000519414 GRAPQ13588 217 aa25.17■■□□□ 1.62
CHMP7-204ENST00000519414 CST9Q5W186 159 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms