RNA–Protein interactions for RNA: ENST00000518840.5

R3HCC1-204, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene R3HCC1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-204ENST00000518840 IARSP41252 1262 aaKnown RBP24.47■■□□□ 1.51
R3HCC1-204ENST00000518840 LMOD3Q0VAK6 560 aa24.47■■□□□ 1.51
R3HCC1-204ENST00000518840 NEUROD2Q15784 382 aa24.47■■□□□ 1.51
R3HCC1-204ENST00000518840 KRT24Q2M2I5 525 aa24.46■■□□□ 1.51
R3HCC1-204ENST00000518840 NECTIN2Q92692 538 aa24.46■■□□□ 1.51
R3HCC1-204ENST00000518840 RPGRQ92834 1020 aaKnown RBP24.46■■□□□ 1.51
R3HCC1-204ENST00000518840 TAF1DQ9H5J8 278 aaPredicted RBP24.46■■□□□ 1.51
R3HCC1-204ENST00000518840 TRIM35Q9UPQ4 493 aa24.45■■□□□ 1.5
R3HCC1-204ENST00000518840 IQCA1LA6NCM1 817 aa24.44■■□□□ 1.5
R3HCC1-204ENST00000518840 FZD9O00144 591 aa24.44■■□□□ 1.5
R3HCC1-204ENST00000518840 PSMD1Q99460 953 aa24.44■■□□□ 1.5
R3HCC1-204ENST00000518840 CHL1O00533 1208 aa24.43■■□□□ 1.5
R3HCC1-204ENST00000518840 PARP10Q53GL7 1025 aa24.43■■□□□ 1.5
R3HCC1-204ENST00000518840 CC2D2BQ6DHV5 1058 aa24.43■■□□□ 1.5
R3HCC1-204ENST00000518840 PPP1R42Q7Z4L9 355 aa24.43■■□□□ 1.5
R3HCC1-204ENST00000518840 CRAMP1Q96RY5 1269 aa24.43■■□□□ 1.5
R3HCC1-204ENST00000518840 COL4A5P29400 1685 aa24.43■■□□□ 1.5
R3HCC1-204ENST00000518840 COPS6Q7L5N1 327 aa24.42■■□□□ 1.5
R3HCC1-204ENST00000518840 XAGE3Q8WTP9 111 aa24.42■■□□□ 1.5
R3HCC1-204ENST00000518840 RUNDC1Q96C34 613 aa24.42■■□□□ 1.5
R3HCC1-204ENST00000518840 TCERG1O14776 1098 aaKnown RBP24.41■■□□□ 1.5
R3HCC1-204ENST00000518840 SLC10A5Q5PT55 438 aa24.41■■□□□ 1.5
R3HCC1-204ENST00000518840 LDHDQ86WU2 507 aa24.41■■□□□ 1.5
R3HCC1-204ENST00000518840 RBM17Q96I25 401 aaKnown RBP24.41■■□□□ 1.5
R3HCC1-204ENST00000518840 UTP14AQ9BVJ6 771 aaKnown RBP24.41■■□□□ 1.5
R3HCC1-204ENST00000518840 ADAMTS8Q9UP79 889 aa24.41■■□□□ 1.5
R3HCC1-204ENST00000518840 PPEF1O14829 653 aaPredicted RBP24.4■■□□□ 1.5
R3HCC1-204ENST00000518840 AIMP1Q12904 312 aaKnown RBP24.4■■□□□ 1.5
R3HCC1-204ENST00000518840 RNF123Q5XPI4 1314 aa24.39■■□□□ 1.5
R3HCC1-204ENST00000518840 WDR43Q15061 677 aaKnown RBP eCLIP24.39■■□□□ 1.49
R3HCC1-204ENST00000518840 NLRP3Q96P20 1036 aa24.39■■□□□ 1.49
R3HCC1-204ENST00000518840 HACL1Q9UJ83 578 aa24.39■■□□□ 1.49
R3HCC1-204ENST00000518840 LAS1LQ9Y4W2 734 aaKnown RBP24.39■■□□□ 1.49
R3HCC1-204ENST00000518840 SCN4AP35499 1836 aa24.39■■□□□ 1.49
R3HCC1-204ENST00000518840 PASKQ96RG2 1323 aa24.38■■□□□ 1.49
R3HCC1-204ENST00000518840 EAPPQ56P03 285 aaPredicted RBP24.38■■□□□ 1.49
R3HCC1-204ENST00000518840 COL13A1Q5TAT6 717 aaPredicted RBP24.38■■□□□ 1.49
R3HCC1-204ENST00000518840 NLRP10Q86W26 655 aa24.38■■□□□ 1.49
R3HCC1-204ENST00000518840 DDX21Q9NR30 783 aaKnown RBP eCLIP24.38■■□□□ 1.49
R3HCC1-204ENST00000518840 CREBZFQ9NS37 354 aa24.38■■□□□ 1.49
R3HCC1-204ENST00000518840 EPHX2P34913 555 aa24.37■■□□□ 1.49
R3HCC1-204ENST00000518840 GPC2Q8N158 579 aa24.37■■□□□ 1.49
R3HCC1-204ENST00000518840 JDP2Q8WYK2 163 aa24.37■■□□□ 1.49
R3HCC1-204ENST00000518840 ITGBL1O95965 494 aaPredicted RBP24.36■■□□□ 1.49
R3HCC1-204ENST00000518840 TCIRG1Q13488 830 aa24.36■■□□□ 1.49
R3HCC1-204ENST00000518840 CHPF2Q9P2E5 772 aa24.36■■□□□ 1.49
R3HCC1-204ENST00000518840 ABCC4O15439 1325 aa24.35■■□□□ 1.49
R3HCC1-204ENST00000518840 HCLS1P14317 486 aaPredicted RBP24.35■■□□□ 1.49
R3HCC1-204ENST00000518840 GRIPAP1Q4V328 841 aa24.35■■□□□ 1.49
R3HCC1-204ENST00000518840 HSP90AB3PQ58FF7 597 aa24.35■■□□□ 1.49
R3HCC1-204ENST00000518840 PRKRIP1Q9H875 184 aaPredicted RBP24.35■■□□□ 1.49
R3HCC1-204ENST00000518840 MKRN1Q9UHC7 482 aaKnown RBP24.35■■□□□ 1.49
R3HCC1-204ENST00000518840 HSPA1AP0DMV8 641 aaKnown RBP24.34■■□□□ 1.49
R3HCC1-204ENST00000518840 HSPA1BP0DMV9 641 aaKnown RBP24.34■■□□□ 1.49
R3HCC1-204ENST00000518840 LARGE2Q8N3Y3 721 aa24.34■■□□□ 1.49
R3HCC1-204ENST00000518840 ZNF428Q96B54 188 aa24.34■■□□□ 1.49
R3HCC1-204ENST00000518840 ATP6V0A2Q9Y487 856 aa24.34■■□□□ 1.49
R3HCC1-204ENST00000518840 ADAMTSL1Q8N6G6 1762 aa24.34■■□□□ 1.49
R3HCC1-204ENST00000518840 EIF6P56537 245 aaKnown RBP24.33■■□□□ 1.49
R3HCC1-204ENST00000518840 CLEC11AQ9Y240 323 aa24.33■■□□□ 1.49
R3HCC1-204ENST00000518840 GJA3Q9Y6H8 435 aa24.33■■□□□ 1.49
R3HCC1-204ENST00000518840 HDGFL1Q5TGJ6 251 aa24.32■■□□□ 1.48
R3HCC1-204ENST00000518840 TRMT112Q9UI30 125 aaKnown RBP24.32■■□□□ 1.48
R3HCC1-204ENST00000518840 ANKRD36CQ5JPF3 1778 aa24.31■■□□□ 1.48
R3HCC1-204ENST00000518840 PCNTO95613 3336 aa24.31■■□□□ 1.48
R3HCC1-204ENST00000518840 MAP1SQ66K74 1059 aaPredicted RBP24.31■■□□□ 1.48
R3HCC1-204ENST00000518840 PNMA8AQ86V59 439 aaPredicted RBP24.31■■□□□ 1.48
R3HCC1-204ENST00000518840 CFAP44Q96MT7 982 aa24.31■■□□□ 1.48
R3HCC1-204ENST00000518840 LTBP1Q14766 1721 aa24.3■■□□□ 1.48
R3HCC1-204ENST00000518840 HOXB7P09629 217 aa24.3■■□□□ 1.48
R3HCC1-204ENST00000518840 SCNN1DP51172 638 aa24.3■■□□□ 1.48
R3HCC1-204ENST00000518840 SH3TC1Q8TE82 1336 aa24.3■■□□□ 1.48
R3HCC1-204ENST00000518840 PPIP5K2O43314 1243 aa24.29■■□□□ 1.48
R3HCC1-204ENST00000518840 AOC3Q16853 763 aa24.29■■□□□ 1.48
R3HCC1-204ENST00000518840 DUSP27Q5VZP5 1158 aa24.29■■□□□ 1.48
R3HCC1-204ENST00000518840 PLBD2Q8NHP8 589 aa24.29■■□□□ 1.48
R3HCC1-204ENST00000518840 MBIPQ9NS73 344 aa24.29■■□□□ 1.48
R3HCC1-204ENST00000518840 CNTNAP1P78357 1384 aa24.29■■□□□ 1.48
R3HCC1-204ENST00000518840 BBOX1O75936 387 aa24.28■■□□□ 1.48
R3HCC1-204ENST00000518840 EPS15P42566 896 aa24.28■■□□□ 1.48
R3HCC1-204ENST00000518840 ANKRD13DQ6ZTN6 518 aa24.28■■□□□ 1.48
R3HCC1-204ENST00000518840 NIM1KQ8IY84 436 aa24.28■■□□□ 1.48
R3HCC1-204ENST00000518840 CNTROBQ8N137 903 aa24.28■■□□□ 1.48
R3HCC1-204ENST00000518840 RTFDC1Q9BY42 306 aaPredicted RBP24.28■■□□□ 1.48
R3HCC1-204ENST00000518840 DBF4Q9UBU7 674 aaPredicted RBP24.28■■□□□ 1.48
R3HCC1-204ENST00000518840 LAMB2P55268 1798 aa24.28■■□□□ 1.48
R3HCC1-204ENST00000518840 TMEM88BA6NKF7 163 aa24.27■■□□□ 1.48
R3HCC1-204ENST00000518840 ZNF853P0CG23 659 aa24.27■■□□□ 1.48
R3HCC1-204ENST00000518840 SP8Q8IXZ3 490 aa24.27■■□□□ 1.48
R3HCC1-204ENST00000518840 ISCA1Q9BUE6 129 aa24.27■■□□□ 1.48
R3HCC1-204ENST00000518840 APAF1O14727 1248 aa24.26■■□□□ 1.47
R3HCC1-204ENST00000518840 TMX4Q9H1E5 349 aaPredicted RBP24.26■■□□□ 1.47
R3HCC1-204ENST00000518840 ATP5J2-PTCD1G3V325 749 aa24.25■■□□□ 1.47
R3HCC1-204ENST00000518840 LMOD1P29536 600 aaPredicted RBP24.25■■□□□ 1.47
R3HCC1-204ENST00000518840 GRAPQ13588 217 aa24.25■■□□□ 1.47
R3HCC1-204ENST00000518840 DDX46Q7L014 1031 aaKnown RBP24.25■■□□□ 1.47
R3HCC1-204ENST00000518840 GRAPLQ8TC17 118 aaPredicted RBP24.25■■□□□ 1.47
R3HCC1-204ENST00000518840 CXCL9Q07325 125 aa24.24■■□□□ 1.47
R3HCC1-204ENST00000518840 DPP8Q6V1X1 898 aaPredicted RBP24.24■■□□□ 1.47
R3HCC1-204ENST00000518840 FAM89AQ96GI7 184 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms