RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 LRPPRCP42704 1394 aaKnown RBP3.82□□□□□ -1.8
SKP1-204ENST00000517691 ROBO2Q9HCK4 1378 aa3.82□□□□□ -1.8
SKP1-204ENST00000517691 DIP2AQ14689 1571 aa3.82□□□□□ -1.8
SKP1-204ENST00000517691 SETBP1Q9Y6X0 1596 aa3.82□□□□□ -1.8
SKP1-204ENST00000517691 NBPF8Q3BBV2 869 aa3.82□□□□□ -1.8
SKP1-204ENST00000517691 FMNL2Q96PY5 1086 aa3.82□□□□□ -1.8
SKP1-204ENST00000517691 HIRIP3Q9BW71 556 aaPredicted RBP3.82□□□□□ -1.8
SKP1-204ENST00000517691 CARD11Q9BXL7 1154 aa3.82□□□□□ -1.8
SKP1-204ENST00000517691 COL25A1Q9BXS0 654 aaPredicted RBP3.82□□□□□ -1.8
SKP1-204ENST00000517691 ALG2Q9H553 416 aa3.82□□□□□ -1.8
SKP1-204ENST00000517691 PRDM9Q9NQV7 894 aa3.82□□□□□ -1.8
SKP1-204ENST00000517691 MYOM2P54296 1465 aa3.82□□□□□ -1.8
SKP1-204ENST00000517691 YTHDC2Q9H6S0 1430 aaKnown RBP3.81□□□□□ -1.8
SKP1-204ENST00000517691 ROCK2O75116 1388 aaKnown RBP3.81□□□□□ -1.8
SKP1-204ENST00000517691 ABCC11Q96J66 1382 aa3.81□□□□□ -1.8
SKP1-204ENST00000517691 VAC14Q08AM6 782 aa3.81□□□□□ -1.8
SKP1-204ENST00000517691 SCARF1Q14162 830 aa3.81□□□□□ -1.8
SKP1-204ENST00000517691 WASHC4Q2M389 1173 aa3.81□□□□□ -1.8
SKP1-204ENST00000517691 KMT5BQ4FZB7 885 aa3.81□□□□□ -1.8
SKP1-204ENST00000517691 CCDC125Q86Z20 511 aa3.81□□□□□ -1.8
SKP1-204ENST00000517691 SCUBE3Q8IX30 993 aa3.81□□□□□ -1.8
SKP1-204ENST00000517691 PRAG1Q86YV5 1406 aa3.81□□□□□ -1.8
SKP1-204ENST00000517691 NKTRP30414 1462 aaKnown RBP3.8□□□□□ -1.8
SKP1-204ENST00000517691 NRXN1Q9ULB1 1477 aa3.8□□□□□ -1.8
SKP1-204ENST00000517691 PPLO60437 1756 aa3.8□□□□□ -1.8
SKP1-204ENST00000517691 CARNS1A5YM72 827 aa3.8□□□□□ -1.8
SKP1-204ENST00000517691 C6orf229H3BNL8 230 aa3.8□□□□□ -1.8
SKP1-204ENST00000517691 PER1O15534 1290 aaPredicted RBP3.8□□□□□ -1.8
SKP1-204ENST00000517691 ATP6V1AP38606 617 aa3.8□□□□□ -1.8
SKP1-204ENST00000517691 ESCO1Q5FWF5 840 aa3.8□□□□□ -1.8
SKP1-204ENST00000517691 SIRT1Q96EB6 747 aa3.8□□□□□ -1.8
SKP1-204ENST00000517691 IGSF5Q9NSI5 407 aa3.8□□□□□ -1.8
SKP1-204ENST00000517691 PLEKHH1Q9ULM0 1364 aa3.8□□□□□ -1.8
SKP1-204ENST00000517691 NRXN3Q9Y4C0 1643 aa3.8□□□□□ -1.8
SKP1-204ENST00000517691 NCOA3Q9Y6Q9 1424 aa3.8□□□□□ -1.8
SKP1-204ENST00000517691 NR6A1Q15406 480 aa3.8□□□□□ -1.8
SKP1-204ENST00000517691 RNF19BQ6ZMZ0 732 aa3.8□□□□□ -1.8
SKP1-204ENST00000517691 HELBQ8NG08 1087 aaPredicted RBP3.8□□□□□ -1.8
SKP1-204ENST00000517691 PRR7Q8TB68 274 aa3.8□□□□□ -1.8
SKP1-204ENST00000517691 TSC1Q92574 1164 aa3.8□□□□□ -1.8
SKP1-204ENST00000517691 PPP1R12CQ9BZL4 782 aa3.8□□□□□ -1.8
SKP1-204ENST00000517691 SLC27A5Q9Y2P5 690 aa3.8□□□□□ -1.8
SKP1-204ENST00000517691 IQSEC2Q5JU85 1478 aa3.79□□□□□ -1.8
SKP1-204ENST00000517691 CENPJQ9HC77 1338 aaPredicted RBP3.79□□□□□ -1.8
SKP1-204ENST00000517691 PTCH1Q13635 1447 aa3.79□□□□□ -1.8
SKP1-204ENST00000517691 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.79□□□□□ -1.8
SKP1-204ENST00000517691 RFX1P22670 979 aa3.79□□□□□ -1.8
SKP1-204ENST00000517691 ITGB7P26010 798 aa3.79□□□□□ -1.8
SKP1-204ENST00000517691 HSPA1LP34931 641 aa3.79□□□□□ -1.8
SKP1-204ENST00000517691 CCDC27Q2M243 656 aa3.79□□□□□ -1.8
SKP1-204ENST00000517691 GPR161Q8N6U8 529 aaKnown RBP3.79□□□□□ -1.8
SKP1-204ENST00000517691 PBXIP1Q96AQ6 731 aa3.79□□□□□ -1.8
SKP1-204ENST00000517691 UCN2Q96RP3 112 aa3.79□□□□□ -1.8
SKP1-204ENST00000517691 ORAI2Q96SN7 254 aa3.79□□□□□ -1.8
SKP1-204ENST00000517691 CDK19Q9BWU1 502 aa3.79□□□□□ -1.8
SKP1-204ENST00000517691 FCF1Q9Y324 198 aaKnown RBP3.79□□□□□ -1.8
SKP1-204ENST00000517691 NWD1Q149M9 1564 aa3.79□□□□□ -1.8
SKP1-204ENST00000517691 FAM135BQ49AJ0 1406 aa3.79□□□□□ -1.8
SKP1-204ENST00000517691 STRCP1A6NGW2 1772 aa3.79□□□□□ -1.8
SKP1-204ENST00000517691 WASLO00401 505 aaPredicted RBP3.78□□□□□ -1.8
SKP1-204ENST00000517691 GRIPAP1Q4V328 841 aa3.78□□□□□ -1.8
SKP1-204ENST00000517691 MORN1Q5T089 497 aa3.78□□□□□ -1.8
SKP1-204ENST00000517691 BRINP3Q76B58 766 aa3.78□□□□□ -1.8
SKP1-204ENST00000517691 CERS3Q8IU89 383 aa3.78□□□□□ -1.8
SKP1-204ENST00000517691 FAM160A2Q8N612 972 aaPredicted RBP3.78□□□□□ -1.8
SKP1-204ENST00000517691 DDX17Q92841 729 aaKnown RBP3.78□□□□□ -1.8
SKP1-204ENST00000517691 ADGRL3Q9HAR2 1447 aa3.78□□□□□ -1.8
SKP1-204ENST00000517691 ASXL1Q8IXJ9 1541 aa3.78□□□□□ -1.8
SKP1-204ENST00000517691 CHD2O14647 1828 aaKnown RBP3.78□□□□□ -1.8
SKP1-204ENST00000517691 ST20-MTHFSA0A0A6YYL1 179 aa3.78□□□□□ -1.8
SKP1-204ENST00000517691 PALM3A6NDB9 673 aaPredicted RBP3.78□□□□□ -1.8
SKP1-204ENST00000517691 FOXO3O43524 673 aa3.78□□□□□ -1.8
SKP1-204ENST00000517691 XPCQ01831 940 aaPredicted RBP3.78□□□□□ -1.8
SKP1-204ENST00000517691 PSME1Q06323 249 aa3.78□□□□□ -1.8
SKP1-204ENST00000517691 MCTP1Q6DN14 999 aa3.78□□□□□ -1.8
SKP1-204ENST00000517691 PMFBP1Q8TBY8 1022 aa3.78□□□□□ -1.8
SKP1-204ENST00000517691 NANOS1Q8WY41 292 aaKnown RBP3.78□□□□□ -1.8
SKP1-204ENST00000517691 THAP11Q96EK4 314 aa3.78□□□□□ -1.8
SKP1-204ENST00000517691 SEMA6BQ9H3T3 888 aa3.78□□□□□ -1.8
SKP1-204ENST00000517691 TFIP11Q9UBB9 837 aaKnown RBP3.78□□□□□ -1.8
SKP1-204ENST00000517691 EIF3AQ14152 1382 aaKnown RBP3.78□□□□□ -1.8
SKP1-204ENST00000517691 ADGRB1O14514 1584 aa3.78□□□□□ -1.8
SKP1-204ENST00000517691 EVC2Q86UK5 1308 aa3.77□□□□□ -1.81
SKP1-204ENST00000517691 TECPR2O15040 1411 aa3.77□□□□□ -1.81
SKP1-204ENST00000517691 IFT172Q9UG01 1749 aa3.77□□□□□ -1.81
SKP1-204ENST00000517691 SMARCA5O60264 1052 aaPredicted RBP3.77□□□□□ -1.81
SKP1-204ENST00000517691 RETREG3Q86VR2 466 aa3.77□□□□□ -1.81
SKP1-204ENST00000517691 NGDNQ8NEJ9 315 aaKnown RBP3.77□□□□□ -1.81
SKP1-204ENST00000517691 NUDT16Q96DE0 195 aaKnown RBP3.77□□□□□ -1.81
SKP1-204ENST00000517691 BRPF3Q9ULD4 1205 aa3.77□□□□□ -1.81
SKP1-204ENST00000517691 XRN1Q8IZH2 1706 aaKnown RBP3.77□□□□□ -1.81
SKP1-204ENST00000517691 LAMC1P11047 1609 aa3.77□□□□□ -1.81
SKP1-204ENST00000517691 DCCP43146 1447 aa3.77□□□□□ -1.81
SKP1-204ENST00000517691 C1orf167Q5SNV9 1468 aa3.77□□□□□ -1.81
SKP1-204ENST00000517691 PDE4CQ08493 712 aa3.77□□□□□ -1.81
SKP1-204ENST00000517691 KCNA1Q09470 495 aa3.77□□□□□ -1.81
SKP1-204ENST00000517691 DESI1Q6ICB0 168 aa3.77□□□□□ -1.81
SKP1-204ENST00000517691 LYPD8Q6UX82 237 aa3.77□□□□□ -1.81
SKP1-204ENST00000517691 KRT28Q7Z3Y7 464 aa3.77□□□□□ -1.81
SKP1-204ENST00000517691 TMC1Q8TDI8 760 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms