RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.17□□□□□ -1.58
RNU4-60P-201ENST00000517239 ACTN4O43707 911 aaKnown RBP5.16□□□□□ -1.58
RNU4-60P-201ENST00000517239 CAND2O75155 1236 aa5.16□□□□□ -1.58
RNU4-60P-201ENST00000517239 PDGFAP04085 211 aa5.16□□□□□ -1.58
RNU4-60P-201ENST00000517239 KRT18P05783 430 aaKnown RBP5.16□□□□□ -1.58
RNU4-60P-201ENST00000517239 GNALP38405 381 aa5.16□□□□□ -1.58
RNU4-60P-201ENST00000517239 RAB15P59190 212 aa5.16□□□□□ -1.58
RNU4-60P-201ENST00000517239 EXOSC10Q01780 885 aaKnown RBP5.16□□□□□ -1.58
RNU4-60P-201ENST00000517239 IFRD2Q12894 506 aaPredicted RBP5.16□□□□□ -1.58
RNU4-60P-201ENST00000517239 HDAC1Q13547 482 aaPredicted RBP5.16□□□□□ -1.58
RNU4-60P-201ENST00000517239 TBCELQ5QJ74 424 aa5.16□□□□□ -1.58
RNU4-60P-201ENST00000517239 SYCP2LQ5T4T6 812 aa5.16□□□□□ -1.58
RNU4-60P-201ENST00000517239 CLEC4GQ6UXB4 293 aa5.16□□□□□ -1.58
RNU4-60P-201ENST00000517239 PI16Q6UXB8 463 aa5.16□□□□□ -1.58
RNU4-60P-201ENST00000517239 SH3BP5LQ7L8J4 393 aa5.16□□□□□ -1.58
RNU4-60P-201ENST00000517239 NUDT12Q9BQG2 462 aa5.16□□□□□ -1.58
RNU4-60P-201ENST00000517239 SFMBT1Q9UHJ3 866 aa5.16□□□□□ -1.58
RNU4-60P-201ENST00000517239 LRFN2Q9ULH4 789 aa5.16□□□□□ -1.58
RNU4-60P-201ENST00000517239 LEMD3Q9Y2U8 911 aa5.16□□□□□ -1.58
RNU4-60P-201ENST00000517239 PSDA5PKW4 1024 aaPredicted RBP5.15□□□□□ -1.59
RNU4-60P-201ENST00000517239 MINDY4BA8MYZ0 360 aa5.15□□□□□ -1.59
RNU4-60P-201ENST00000517239 GIPC1O14908 333 aa5.15□□□□□ -1.59
RNU4-60P-201ENST00000517239 STAU1O95793 577 aaKnown RBP5.15□□□□□ -1.59
RNU4-60P-201ENST00000517239 PDE6BP35913 854 aa5.15□□□□□ -1.59
RNU4-60P-201ENST00000517239 CDKN1CP49918 316 aaPredicted RBP5.15□□□□□ -1.59
RNU4-60P-201ENST00000517239 SQSTM1Q13501 440 aa5.15□□□□□ -1.59
RNU4-60P-201ENST00000517239 TKFCQ3LXA3 575 aa5.15□□□□□ -1.59
RNU4-60P-201ENST00000517239 C8orf34Q49A92 452 aa5.15□□□□□ -1.59
RNU4-60P-201ENST00000517239 AXDND1Q5T1B0 1012 aaPredicted RBP5.15□□□□□ -1.59
RNU4-60P-201ENST00000517239 WDR78Q5VTH9 848 aa5.15□□□□□ -1.59
RNU4-60P-201ENST00000517239 PPARGC1BQ86YN6 1023 aaKnown RBP5.15□□□□□ -1.59
RNU4-60P-201ENST00000517239 TTC16Q8NEE8 873 aa5.15□□□□□ -1.59
RNU4-60P-201ENST00000517239 SCYL1Q96KG9 808 aa5.15□□□□□ -1.59
RNU4-60P-201ENST00000517239 FEZ1Q99689 392 aa5.15□□□□□ -1.59
RNU4-60P-201ENST00000517239 CCDC113Q9H0I3 377 aa5.15□□□□□ -1.59
RNU4-60P-201ENST00000517239 DNAJC25Q9H1X3 360 aa5.15□□□□□ -1.59
RNU4-60P-201ENST00000517239 ST7Q9NRC1 585 aa5.15□□□□□ -1.59
RNU4-60P-201ENST00000517239 ADAMTS1Q9UHI8 967 aa5.15□□□□□ -1.59
RNU4-60P-201ENST00000517239 POTEFA5A3E0 1075 aa5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 CPNE3O75131 537 aaKnown RBP5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 KIF4AO95239 1232 aa5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 USP17L7P0C7H9 530 aa5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 PCSK2P16519 638 aa5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 NOS2P35228 1153 aa5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 ST13P50502 369 aaKnown RBP5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 DHX8Q14562 1220 aaKnown RBP5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 BRD3Q15059 726 aa5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 AGERQ15109 404 aa5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 PPP2R5AQ15172 486 aa5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 ZRSR2Q15696 482 aaKnown RBP5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 C21orf62-AS1Q17RA5 79 aa5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 KRBA2Q6ZNG9 492 aa5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 KRT26Q7Z3Y9 468 aa5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 RELL1Q8IUW5 271 aa5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 EPS8L3Q8TE67 593 aaKnown RBP5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 RELTQ969Z4 430 aa5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 EMID1Q96A84 441 aaPredicted RBP5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 NGLY1Q96IV0 654 aa5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 KCNH8Q96L42 1107 aa5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 C2orf49Q9BVC5 232 aaPredicted RBP5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 TMX4Q9H1E5 349 aaPredicted RBP5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 QTRT2Q9H974 415 aaKnown RBP5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 TMEM260Q9NX78 707 aa5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 PRKAG3Q9UGI9 489 aa5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 STRIP2Q9ULQ0 834 aa5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 ATP8A1Q9Y2Q0 1164 aa5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 SALL2Q9Y467 1007 aaPredicted RBP5.14□□□□□ -1.59
RNU4-60P-201ENST00000517239 F6X3S4 739 aa5.13□□□□□ -1.59
RNU4-60P-201ENST00000517239 SMAD7O15105 426 aaKnown RBP5.13□□□□□ -1.59
RNU4-60P-201ENST00000517239 TSPAN6O43657 245 aa5.13□□□□□ -1.59
RNU4-60P-201ENST00000517239 ALDH1L1O75891 902 aa5.13□□□□□ -1.59
RNU4-60P-201ENST00000517239 BPNT1O95861 308 aa5.13□□□□□ -1.59
RNU4-60P-201ENST00000517239 VIL1P09327 827 aaKnown RBP5.13□□□□□ -1.59
RNU4-60P-201ENST00000517239 IRS1P35568 1242 aa5.13□□□□□ -1.59
RNU4-60P-201ENST00000517239 ZAP70P43403 619 aa5.13□□□□□ -1.59
RNU4-60P-201ENST00000517239 GDF10P55107 478 aa5.13□□□□□ -1.59
RNU4-60P-201ENST00000517239 FAM98CQ17RN3 349 aaKnown RBP5.13□□□□□ -1.59
RNU4-60P-201ENST00000517239 DOK7Q18PE1 504 aa5.13□□□□□ -1.59
RNU4-60P-201ENST00000517239 ERFEQ4G0M1 354 aa5.13□□□□□ -1.59
RNU4-60P-201ENST00000517239 GPR153Q6NV75 609 aa5.13□□□□□ -1.59
RNU4-60P-201ENST00000517239 SCUBE3Q8IX30 993 aa5.13□□□□□ -1.59
RNU4-60P-201ENST00000517239 SLC10A4Q96EP9 437 aa5.13□□□□□ -1.59
RNU4-60P-201ENST00000517239 EAF1Q96JC9 268 aaPredicted RBP5.13□□□□□ -1.59
RNU4-60P-201ENST00000517239 NAP1L4Q99733 375 aaKnown RBP5.13□□□□□ -1.59
RNU4-60P-201ENST00000517239 ZBED2Q9BTP6 218 aa5.13□□□□□ -1.59
RNU4-60P-201ENST00000517239 PCGF6Q9BYE7 350 aa5.13□□□□□ -1.59
RNU4-60P-201ENST00000517239 GGNBP2Q9H3C7 697 aa5.13□□□□□ -1.59
RNU4-60P-201ENST00000517239 FAM8A1Q9UBU6 413 aa5.13□□□□□ -1.59
RNU4-60P-201ENST00000517239 RABGEF1Q9UJ41 708 aa5.13□□□□□ -1.59
RNU4-60P-201ENST00000517239 A6NHS1 94 aa5.12□□□□□ -1.59
RNU4-60P-201ENST00000517239 RIMBP2O15034 1052 aa5.12□□□□□ -1.59
RNU4-60P-201ENST00000517239 MYL1P05976 194 aa5.12□□□□□ -1.59
RNU4-60P-201ENST00000517239 GBP2P32456 591 aaPredicted RBP5.12□□□□□ -1.59
RNU4-60P-201ENST00000517239 EIF4A3P38919 411 aaKnown RBP5.12□□□□□ -1.59
RNU4-60P-201ENST00000517239 SCTRP47872 440 aa5.12□□□□□ -1.59
RNU4-60P-201ENST00000517239 EPHA4P54764 986 aa5.12□□□□□ -1.59
RNU4-60P-201ENST00000517239 LMOD3Q0VAK6 560 aa5.12□□□□□ -1.59
RNU4-60P-201ENST00000517239 LRRC41Q15345 812 aa5.12□□□□□ -1.59
RNU4-60P-201ENST00000517239 NFE2Q16621 373 aaPredicted RBP5.12□□□□□ -1.59
RNU4-60P-201ENST00000517239 C14orf80Q86SX3 495 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms