RNA–Protein interactions for RNA: ENST00000515627.2

LINC01843-201, Transcript of long intergenic non-protein coding RNA 1843, humanhuman

TSL 1 (best) BASIC

Gene LINC01843, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01843-201ENST00000515627 EIF2S2P20042 333 aaKnown RBP13.38□□□□□ -0.27
LINC01843-201ENST00000515627 KRT24Q2M2I5 525 aa13.38□□□□□ -0.27
LINC01843-201ENST00000515627 IFFO2Q5TF58 517 aa13.38□□□□□ -0.27
LINC01843-201ENST00000515627 JMYQ8N9B5 988 aa13.38□□□□□ -0.27
LINC01843-201ENST00000515627 NYXQ9GZU5 481 aa13.38□□□□□ -0.27
LINC01843-201ENST00000515627 TRIM35Q9UPQ4 493 aa13.38□□□□□ -0.27
LINC01843-201ENST00000515627 CHL1O00533 1208 aa13.37□□□□□ -0.27
LINC01843-201ENST00000515627 ALDH1B1P30837 517 aa13.37□□□□□ -0.27
LINC01843-201ENST00000515627 HOXA10P31260 410 aaPredicted RBP13.37□□□□□ -0.27
LINC01843-201ENST00000515627 NEUROD2Q15784 382 aa13.37□□□□□ -0.27
LINC01843-201ENST00000515627 LMOD3Q0VAK6 560 aa13.36□□□□□ -0.27
LINC01843-201ENST00000515627 RTKN2Q8IZC4 609 aa13.36□□□□□ -0.27
LINC01843-201ENST00000515627 SYNE4Q8N205 404 aa13.36□□□□□ -0.27
LINC01843-201ENST00000515627 NECTIN2Q92692 538 aa13.36□□□□□ -0.27
LINC01843-201ENST00000515627 L3MBTL3Q96JM7 780 aaPredicted RBP13.36□□□□□ -0.27
LINC01843-201ENST00000515627 ADAMTS8Q9UP79 889 aa13.36□□□□□ -0.27
LINC01843-201ENST00000515627 IARSP41252 1262 aaKnown RBP13.35□□□□□ -0.27
LINC01843-201ENST00000515627 RUNDC1Q96C34 613 aa13.35□□□□□ -0.27
LINC01843-201ENST00000515627 ANKRD36CQ5JPF3 1778 aa13.35□□□□□ -0.27
LINC01843-201ENST00000515627 SCN4AP35499 1836 aa13.34□□□□□ -0.27
LINC01843-201ENST00000515627 FZD9O00144 591 aa13.34□□□□□ -0.27
LINC01843-201ENST00000515627 PARP10Q53GL7 1025 aa13.34□□□□□ -0.27
LINC01843-201ENST00000515627 CHADLQ6NUI6 762 aa13.34□□□□□ -0.27
LINC01843-201ENST00000515627 COPS6Q7L5N1 327 aa13.34□□□□□ -0.27
LINC01843-201ENST00000515627 XAGE3Q8WTP9 111 aa13.34□□□□□ -0.27
LINC01843-201ENST00000515627 RPGRQ92834 1020 aaKnown RBP13.34□□□□□ -0.27
LINC01843-201ENST00000515627 CRAMP1Q96RY5 1269 aa13.34□□□□□ -0.27
LINC01843-201ENST00000515627 PSMD1Q99460 953 aa13.34□□□□□ -0.27
LINC01843-201ENST00000515627 TAF1DQ9H5J8 278 aaPredicted RBP13.34□□□□□ -0.27
LINC01843-201ENST00000515627 PRKRIP1Q9H875 184 aaPredicted RBP13.34□□□□□ -0.27
LINC01843-201ENST00000515627 ADAMTSL1Q8N6G6 1762 aa13.33□□□□□ -0.28
LINC01843-201ENST00000515627 CACNB1Q02641 598 aaPredicted RBP13.33□□□□□ -0.28
LINC01843-201ENST00000515627 WDR43Q15061 677 aaKnown RBP eCLIP13.33□□□□□ -0.28
LINC01843-201ENST00000515627 SLC10A5Q5PT55 438 aa13.33□□□□□ -0.28
LINC01843-201ENST00000515627 LAMB2P55268 1798 aa13.32□□□□□ -0.28
LINC01843-201ENST00000515627 AIMP1Q12904 312 aaKnown RBP13.32□□□□□ -0.28
LINC01843-201ENST00000515627 CC2D2BQ6DHV5 1058 aa13.32□□□□□ -0.28
LINC01843-201ENST00000515627 PPP1R42Q7Z4L9 355 aa13.32□□□□□ -0.28
LINC01843-201ENST00000515627 NLRP10Q86W26 655 aa13.32□□□□□ -0.28
LINC01843-201ENST00000515627 UTP14AQ9BVJ6 771 aaKnown RBP13.32□□□□□ -0.28
LINC01843-201ENST00000515627 RNF39Q9H2S5 420 aa13.32□□□□□ -0.28
LINC01843-201ENST00000515627 DDX21Q9NR30 783 aaKnown RBP eCLIP13.32□□□□□ -0.28
LINC01843-201ENST00000515627 CHPF2Q9P2E5 772 aa13.32□□□□□ -0.28
LINC01843-201ENST00000515627 LAS1LQ9Y4W2 734 aaKnown RBP13.32□□□□□ -0.28
LINC01843-201ENST00000515627 LTBP1Q14766 1721 aa13.31□□□□□ -0.28
LINC01843-201ENST00000515627 IQCA1LA6NCM1 817 aa13.31□□□□□ -0.28
LINC01843-201ENST00000515627 TCERG1O14776 1098 aaKnown RBP13.31□□□□□ -0.28
LINC01843-201ENST00000515627 PPEF1O14829 653 aaPredicted RBP13.31□□□□□ -0.28
LINC01843-201ENST00000515627 NPM3O75607 178 aaKnown RBP13.31□□□□□ -0.28
LINC01843-201ENST00000515627 RBM17Q96I25 401 aaKnown RBP13.31□□□□□ -0.28
LINC01843-201ENST00000515627 RNF123Q5XPI4 1314 aa13.31□□□□□ -0.28
LINC01843-201ENST00000515627 PASKQ96RG2 1323 aa13.31□□□□□ -0.28
LINC01843-201ENST00000515627 TCIRG1Q13488 830 aa13.3□□□□□ -0.28
LINC01843-201ENST00000515627 LDHDQ86WU2 507 aa13.3□□□□□ -0.28
LINC01843-201ENST00000515627 ZNF428Q96B54 188 aa13.3□□□□□ -0.28
LINC01843-201ENST00000515627 NLRP3Q96P20 1036 aa13.3□□□□□ -0.28
LINC01843-201ENST00000515627 ABCC4O15439 1325 aa13.3□□□□□ -0.28
LINC01843-201ENST00000515627 ITGBL1O95965 494 aaPredicted RBP13.29□□□□□ -0.28
LINC01843-201ENST00000515627 ZNF853P0CG23 659 aa13.29□□□□□ -0.28
LINC01843-201ENST00000515627 HCLS1P14317 486 aaPredicted RBP13.29□□□□□ -0.28
LINC01843-201ENST00000515627 EPHX2P34913 555 aa13.29□□□□□ -0.28
LINC01843-201ENST00000515627 HSP90AB3PQ58FF7 597 aa13.29□□□□□ -0.28
LINC01843-201ENST00000515627 HDGFL1Q5TGJ6 251 aa13.29□□□□□ -0.28
LINC01843-201ENST00000515627 GPC2Q8N158 579 aa13.29□□□□□ -0.28
LINC01843-201ENST00000515627 CFAP44Q96MT7 982 aa13.29□□□□□ -0.28
LINC01843-201ENST00000515627 MBIPQ9NS73 344 aa13.29□□□□□ -0.28
LINC01843-201ENST00000515627 HACL1Q9UJ83 578 aa13.29□□□□□ -0.28
LINC01843-201ENST00000515627 ATP6V0A2Q9Y487 856 aa13.29□□□□□ -0.28
LINC01843-201ENST00000515627 COL4A1P02462 1669 aa13.28□□□□□ -0.28
LINC01843-201ENST00000515627 TAF1P21675 1872 aa13.28□□□□□ -0.28
LINC01843-201ENST00000515627 HOXB7P09629 217 aa13.28□□□□□ -0.28
LINC01843-201ENST00000515627 GRIPAP1Q4V328 841 aa13.28□□□□□ -0.28
LINC01843-201ENST00000515627 EAPPQ56P03 285 aaPredicted RBP13.28□□□□□ -0.28
LINC01843-201ENST00000515627 JDP2Q8WYK2 163 aa13.28□□□□□ -0.28
LINC01843-201ENST00000515627 CREBZFQ9NS37 354 aa13.28□□□□□ -0.28
LINC01843-201ENST00000515627 DDX60Q8IY21 1712 aaKnown RBP13.27□□□□□ -0.28
LINC01843-201ENST00000515627 ZNF316A6NFI3 1004 aaPredicted RBP13.27□□□□□ -0.29
LINC01843-201ENST00000515627 APAF1O14727 1248 aa13.27□□□□□ -0.29
LINC01843-201ENST00000515627 SCNN1DP51172 638 aa13.27□□□□□ -0.29
LINC01843-201ENST00000515627 COL13A1Q5TAT6 717 aaPredicted RBP13.27□□□□□ -0.29
LINC01843-201ENST00000515627 DUSP27Q5VZP5 1158 aa13.27□□□□□ -0.29
LINC01843-201ENST00000515627 LARGE2Q8N3Y3 721 aa13.27□□□□□ -0.29
LINC01843-201ENST00000515627 PLBD2Q8NHP8 589 aa13.27□□□□□ -0.29
LINC01843-201ENST00000515627 ISCA1Q9BUE6 129 aa13.27□□□□□ -0.29
LINC01843-201ENST00000515627 TRMT112Q9UI30 125 aaKnown RBP13.27□□□□□ -0.29
LINC01843-201ENST00000515627 SH3TC1Q8TE82 1336 aa13.27□□□□□ -0.29
LINC01843-201ENST00000515627 PCNTO95613 3336 aa13.27□□□□□ -0.29
LINC01843-201ENST00000515627 EIF6P56537 245 aaKnown RBP13.26□□□□□ -0.29
LINC01843-201ENST00000515627 AOC3Q16853 763 aa13.26□□□□□ -0.29
LINC01843-201ENST00000515627 ANKRD13DQ6ZTN6 518 aa13.26□□□□□ -0.29
LINC01843-201ENST00000515627 RTFDC1Q9BY42 306 aaPredicted RBP13.26□□□□□ -0.29
LINC01843-201ENST00000515627 DUOX1Q9NRD9 1551 aa13.26□□□□□ -0.29
LINC01843-201ENST00000515627 DBF4Q9UBU7 674 aaPredicted RBP13.26□□□□□ -0.29
LINC01843-201ENST00000515627 MKRN1Q9UHC7 482 aaKnown RBP13.26□□□□□ -0.29
LINC01843-201ENST00000515627 GJA3Q9Y6H8 435 aa13.26□□□□□ -0.29
LINC01843-201ENST00000515627 ATP5J2-PTCD1G3V325 749 aa13.25□□□□□ -0.29
LINC01843-201ENST00000515627 PPIP5K2O43314 1243 aa13.25□□□□□ -0.29
LINC01843-201ENST00000515627 HSPA1AP0DMV8 641 aaKnown RBP13.25□□□□□ -0.29
LINC01843-201ENST00000515627 HSPA1BP0DMV9 641 aaKnown RBP13.25□□□□□ -0.29
LINC01843-201ENST00000515627 EPS15P42566 896 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms