RNA–Protein interactions for RNA: ENST00000515365.1

HERC6-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-208ENST00000515365 IDH3AP50213 366 aa6.48□□□□□ -1.37
HERC6-208ENST00000515365 HDLBPQ00341 1268 aaKnown RBP6.48□□□□□ -1.37
HERC6-208ENST00000515365 C8orf34Q49A92 452 aa6.48□□□□□ -1.37
HERC6-208ENST00000515365 LYSMD3Q7Z3D4 306 aa6.48□□□□□ -1.37
HERC6-208ENST00000515365 DNAJC25Q9H1X3 360 aa6.48□□□□□ -1.37
HERC6-208ENST00000515365 ANKIB1Q9P2G1 1089 aa6.48□□□□□ -1.37
HERC6-208ENST00000515365 LOC105371045A0A1W2PR82 267 aa6.47□□□□□ -1.37
HERC6-208ENST00000515365 GNA15P30679 374 aa6.47□□□□□ -1.37
HERC6-208ENST00000515365 ARSDP51689 593 aa6.47□□□□□ -1.37
HERC6-208ENST00000515365 ZC3H6P61129 1189 aaKnown RBP6.47□□□□□ -1.37
HERC6-208ENST00000515365 C6orf118Q5T5N4 469 aa6.47□□□□□ -1.37
HERC6-208ENST00000515365 MRPL14Q6P1L8 145 aaKnown RBP6.47□□□□□ -1.37
HERC6-208ENST00000515365 BICDL1Q6ZP65 573 aa6.47□□□□□ -1.37
HERC6-208ENST00000515365 PRICKLE2Q7Z3G6 844 aa6.47□□□□□ -1.37
HERC6-208ENST00000515365 BTLAQ7Z6A9 289 aa6.47□□□□□ -1.37
HERC6-208ENST00000515365 TTC16Q8NEE8 873 aa6.47□□□□□ -1.37
HERC6-208ENST00000515365 ZIC5Q96T25 663 aa6.47□□□□□ -1.37
HERC6-208ENST00000515365 USP35Q9P2H5 1018 aa6.47□□□□□ -1.37
HERC6-208ENST00000515365 VTI1BQ9UEU0 232 aa6.47□□□□□ -1.37
HERC6-208ENST00000515365 A0A1B0GTH6 734 aa6.46□□□□□ -1.38
HERC6-208ENST00000515365 MSX1P28360 303 aa6.46□□□□□ -1.38
HERC6-208ENST00000515365 XKR5Q6UX68 686 aa6.46□□□□□ -1.38
HERC6-208ENST00000515365 FRMD6Q96NE9 622 aa6.46□□□□□ -1.38
HERC6-208ENST00000515365 TIMMDC1Q9NPL8 285 aa6.46□□□□□ -1.38
HERC6-208ENST00000515365 RTCBQ9Y3I0 505 aaKnown RBP6.46□□□□□ -1.38
HERC6-208ENST00000515365 ERCC6L2Q5T890 1561 aa6.45□□□□□ -1.38
HERC6-208ENST00000515365 CPNE3O75131 537 aaKnown RBP6.45□□□□□ -1.38
HERC6-208ENST00000515365 TNFRSF21O75509 655 aa6.45□□□□□ -1.38
HERC6-208ENST00000515365 ERCC5P28715 1186 aaPredicted RBP6.45□□□□□ -1.38
HERC6-208ENST00000515365 TRIP4Q15650 581 aaPredicted RBP6.45□□□□□ -1.38
HERC6-208ENST00000515365 LRRC69Q6ZNQ3 347 aa6.45□□□□□ -1.38
HERC6-208ENST00000515365 METTL16Q86W50 562 aaKnown RBP6.45□□□□□ -1.38
HERC6-208ENST00000515365 TMEM87AQ8NBN3 555 aa6.45□□□□□ -1.38
HERC6-208ENST00000515365 METTL5Q9NRN9 209 aaKnown RBP6.45□□□□□ -1.38
HERC6-208ENST00000515365 USP20Q9Y2K6 914 aa6.45□□□□□ -1.38
HERC6-208ENST00000515365 KCNMB2Q9Y691 235 aa6.45□□□□□ -1.38
HERC6-208ENST00000515365 RIMBP3CA6NJZ7 1639 aa6.45□□□□□ -1.38
HERC6-208ENST00000515365 RIMBP3BA6NNM3 1639 aa6.45□□□□□ -1.38
HERC6-208ENST00000515365 RIMBP3Q9UFD9 1639 aa6.45□□□□□ -1.38
HERC6-208ENST00000515365 A0A1W2PNR3 127 aa6.44□□□□□ -1.38
HERC6-208ENST00000515365 TTLL8A6PVC2 850 aa6.44□□□□□ -1.38
HERC6-208ENST00000515365 RHOQP17081 205 aa6.44□□□□□ -1.38
HERC6-208ENST00000515365 GRNP28799 593 aaKnown RBP6.44□□□□□ -1.38
HERC6-208ENST00000515365 FANCCQ00597 558 aa6.44□□□□□ -1.38
HERC6-208ENST00000515365 RAD51AP2Q09MP3 1159 aa6.44□□□□□ -1.38
HERC6-208ENST00000515365 ARSJQ5FYB0 599 aaPredicted RBP6.44□□□□□ -1.38
HERC6-208ENST00000515365 C9orf131Q5VYM1 1079 aa6.44□□□□□ -1.38
HERC6-208ENST00000515365 PDE12Q6L8Q7 609 aaKnown RBP6.44□□□□□ -1.38
HERC6-208ENST00000515365 SNX29Q8TEQ0 813 aa6.44□□□□□ -1.38
HERC6-208ENST00000515365 NEUROD4Q9HD90 331 aa6.44□□□□□ -1.38
HERC6-208ENST00000515365 FOXD3Q9UJU5 478 aaPredicted RBP6.44□□□□□ -1.38
HERC6-208ENST00000515365 FNDC3AQ9Y2H6 1198 aaKnown RBP6.44□□□□□ -1.38
HERC6-208ENST00000515365 AK5Q9Y6K8 562 aa6.44□□□□□ -1.38
HERC6-208ENST00000515365 SOS2Q07890 1332 aaPredicted RBP6.44□□□□□ -1.38
HERC6-208ENST00000515365 UBAP1LF5GYI3 381 aa6.43□□□□□ -1.38
HERC6-208ENST00000515365 AVPP01185 164 aa6.43□□□□□ -1.38
HERC6-208ENST00000515365 TYRO3Q06418 890 aa6.43□□□□□ -1.38
HERC6-208ENST00000515365 USPL1Q5W0Q7 1092 aa6.43□□□□□ -1.38
HERC6-208ENST00000515365 ZNF438Q7Z4V0 828 aa6.43□□□□□ -1.38
HERC6-208ENST00000515365 CMTR1Q8N1G2 835 aaKnown RBP6.43□□□□□ -1.38
HERC6-208ENST00000515365 CRISPLD1Q9H336 500 aa6.43□□□□□ -1.38
HERC6-208ENST00000515365 SPG7Q9UQ90 795 aa6.43□□□□□ -1.38
HERC6-208ENST00000515365 CTSHP09668 335 aa6.42□□□□□ -1.38
HERC6-208ENST00000515365 EPB42P16452 691 aa6.42□□□□□ -1.38
HERC6-208ENST00000515365 ZNF76P36508 570 aa6.42□□□□□ -1.38
HERC6-208ENST00000515365 SCARF1Q14162 830 aa6.42□□□□□ -1.38
HERC6-208ENST00000515365 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.42□□□□□ -1.38
HERC6-208ENST00000515365 NAALADL2Q58DX5 795 aa6.42□□□□□ -1.38
HERC6-208ENST00000515365 NT5DC4Q86YG4 428 aa6.42□□□□□ -1.38
HERC6-208ENST00000515365 SREK1Q8WXA9 508 aaKnown RBP6.42□□□□□ -1.38
HERC6-208ENST00000515365 RNF34Q969K3 372 aa6.42□□□□□ -1.38
HERC6-208ENST00000515365 CCDC74AQ96AQ1 378 aa6.42□□□□□ -1.38
HERC6-208ENST00000515365 CRELD1Q96HD1 420 aa6.42□□□□□ -1.38
HERC6-208ENST00000515365 ELP3Q9H9T3 547 aa6.42□□□□□ -1.38
HERC6-208ENST00000515365 ZFYVE28Q9HCC9 887 aa6.42□□□□□ -1.38
HERC6-208ENST00000515365 TMEM63CQ9P1W3 806 aa6.42□□□□□ -1.38
HERC6-208ENST00000515365 PDZRN3Q9UPQ7 1066 aa6.42□□□□□ -1.38
HERC6-208ENST00000515365 RB1CC1Q8TDY2 1594 aa6.41□□□□□ -1.38
HERC6-208ENST00000515365 PHACTR2O75167 634 aa6.41□□□□□ -1.38
HERC6-208ENST00000515365 BMP1P13497 986 aa6.41□□□□□ -1.38
HERC6-208ENST00000515365 EIF4BP23588 611 aaKnown RBP6.41□□□□□ -1.38
HERC6-208ENST00000515365 TRIM46Q7Z4K8 759 aa6.41□□□□□ -1.38
HERC6-208ENST00000515365 DYRK1BQ9Y463 629 aa6.41□□□□□ -1.38
HERC6-208ENST00000515365 SHROOM4Q9ULL8 1493 aa6.41□□□□□ -1.38
HERC6-208ENST00000515365 FAM187AA6NFU0 413 aa6.4□□□□□ -1.38
HERC6-208ENST00000515365 FIGNL2A6NMB9 653 aa6.4□□□□□ -1.38
HERC6-208ENST00000515365 GIPC1O14908 333 aa6.4□□□□□ -1.38
HERC6-208ENST00000515365 EGFRP00533 1210 aa6.4□□□□□ -1.38
HERC6-208ENST00000515365 F11P03951 625 aa6.4□□□□□ -1.38
HERC6-208ENST00000515365 IRS1P35568 1242 aa6.4□□□□□ -1.38
HERC6-208ENST00000515365 SAMD5Q5TGI4 173 aa6.4□□□□□ -1.38
HERC6-208ENST00000515365 CYB5RLQ6IPT4 315 aa6.4□□□□□ -1.38
HERC6-208ENST00000515365 PI16Q6UXB8 463 aa6.4□□□□□ -1.38
HERC6-208ENST00000515365 NLRP8Q86W28 1048 aa6.4□□□□□ -1.38
HERC6-208ENST00000515365 EPS8L3Q8TE67 593 aaKnown RBP6.4□□□□□ -1.38
HERC6-208ENST00000515365 CEP63Q96MT8 703 aa6.4□□□□□ -1.38
HERC6-208ENST00000515365 CHRDQ9H2X0 955 aa6.4□□□□□ -1.38
HERC6-208ENST00000515365 RUBCNLQ9H714 662 aa6.4□□□□□ -1.38
HERC6-208ENST00000515365 C12orf49Q9H741 205 aa6.4□□□□□ -1.38
HERC6-208ENST00000515365 GPAMQ9HCL2 828 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms