RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 RPGRQ92834 1020 aaKnown RBP17.42■□□□□ 0.38
PFDN1-206ENST00000514611 ZNF541Q9H0D2 1346 aa17.42■□□□□ 0.38
PFDN1-206ENST00000514611 POTEIP0CG38 1075 aa17.41■□□□□ 0.38
PFDN1-206ENST00000514611 POTEJP0CG39 1038 aa17.41■□□□□ 0.38
PFDN1-206ENST00000514611 AIMP1Q12904 312 aaKnown RBP17.41■□□□□ 0.38
PFDN1-206ENST00000514611 COPS6Q7L5N1 327 aa17.41■□□□□ 0.38
PFDN1-206ENST00000514611 RTKN2Q8IZC4 609 aa17.41■□□□□ 0.38
PFDN1-206ENST00000514611 XAGE3Q8WTP9 111 aa17.41■□□□□ 0.38
PFDN1-206ENST00000514611 IARSP41252 1262 aaKnown RBP17.4■□□□□ 0.38
PFDN1-206ENST00000514611 PARP10Q53GL7 1025 aa17.4■□□□□ 0.38
PFDN1-206ENST00000514611 PPP1R42Q7Z4L9 355 aa17.4■□□□□ 0.38
PFDN1-206ENST00000514611 KLRG1Q96E93 195 aa17.4■□□□□ 0.38
PFDN1-206ENST00000514611 CHPF2Q9P2E5 772 aa17.4■□□□□ 0.38
PFDN1-206ENST00000514611 COL4A5P29400 1685 aa17.39■□□□□ 0.37
PFDN1-206ENST00000514611 HOXA10P31260 410 aaPredicted RBP17.39■□□□□ 0.37
PFDN1-206ENST00000514611 SYNE4Q8N205 404 aa17.39■□□□□ 0.37
PFDN1-206ENST00000514611 TCERG1O14776 1098 aaKnown RBP17.38■□□□□ 0.37
PFDN1-206ENST00000514611 PPEF1O14829 653 aaPredicted RBP17.38■□□□□ 0.37
PFDN1-206ENST00000514611 HDGFL1Q5TGJ6 251 aa17.38■□□□□ 0.37
PFDN1-206ENST00000514611 ZNF428Q96B54 188 aa17.38■□□□□ 0.37
PFDN1-206ENST00000514611 UTP14AQ9BVJ6 771 aaKnown RBP17.38■□□□□ 0.37
PFDN1-206ENST00000514611 DDX21Q9NR30 783 aaKnown RBP eCLIP17.38■□□□□ 0.37
PFDN1-206ENST00000514611 ANKRD36CQ5JPF3 1778 aa17.38■□□□□ 0.37
PFDN1-206ENST00000514611 PCNTO95613 3336 aa17.37■□□□□ 0.37
PFDN1-206ENST00000514611 NLRP10Q86W26 655 aa17.37■□□□□ 0.37
PFDN1-206ENST00000514611 RBM17Q96I25 401 aaKnown RBP17.37■□□□□ 0.37
PFDN1-206ENST00000514611 L3MBTL3Q96JM7 780 aaPredicted RBP17.37■□□□□ 0.37
PFDN1-206ENST00000514611 PSMD1Q99460 953 aa17.37■□□□□ 0.37
PFDN1-206ENST00000514611 HSP90AB3PQ58FF7 597 aa17.36■□□□□ 0.37
PFDN1-206ENST00000514611 CFAP44Q96MT7 982 aa17.36■□□□□ 0.37
PFDN1-206ENST00000514611 NLRP3Q96P20 1036 aa17.36■□□□□ 0.37
PFDN1-206ENST00000514611 CRAMP1Q96RY5 1269 aa17.36■□□□□ 0.37
PFDN1-206ENST00000514611 MBIPQ9NS73 344 aa17.36■□□□□ 0.37
PFDN1-206ENST00000514611 IQCA1LA6NCM1 817 aa17.35■□□□□ 0.37
PFDN1-206ENST00000514611 FZD9O00144 591 aa17.35■□□□□ 0.37
PFDN1-206ENST00000514611 APAF1O14727 1248 aa17.35■□□□□ 0.37
PFDN1-206ENST00000514611 CC2D2BQ6DHV5 1058 aa17.35■□□□□ 0.37
PFDN1-206ENST00000514611 CHADLQ6NUI6 762 aa17.35■□□□□ 0.37
PFDN1-206ENST00000514611 TAF1DQ9H5J8 278 aaPredicted RBP17.35■□□□□ 0.37
PFDN1-206ENST00000514611 ABCC4O15439 1325 aa17.35■□□□□ 0.37
PFDN1-206ENST00000514611 RNF123Q5XPI4 1314 aa17.35■□□□□ 0.37
PFDN1-206ENST00000514611 HOXB7P09629 217 aa17.34■□□□□ 0.37
PFDN1-206ENST00000514611 HCLS1P14317 486 aaPredicted RBP17.34■□□□□ 0.37
PFDN1-206ENST00000514611 TCIRG1Q13488 830 aa17.34■□□□□ 0.37
PFDN1-206ENST00000514611 SLC10A5Q5PT55 438 aa17.34■□□□□ 0.37
PFDN1-206ENST00000514611 DUSP27Q5VZP5 1158 aa17.34■□□□□ 0.37
PFDN1-206ENST00000514611 JMYQ8N9B5 988 aa17.34■□□□□ 0.37
PFDN1-206ENST00000514611 TRMT112Q9UI30 125 aaKnown RBP17.33■□□□□ 0.36
PFDN1-206ENST00000514611 LAMB2P55268 1798 aa17.33■□□□□ 0.36
PFDN1-206ENST00000514611 SH3TC1Q8TE82 1336 aa17.32■□□□□ 0.36
PFDN1-206ENST00000514611 ZNF853P0CG23 659 aa17.32■□□□□ 0.36
PFDN1-206ENST00000514611 EAPPQ56P03 285 aaPredicted RBP17.32■□□□□ 0.36
PFDN1-206ENST00000514611 LDHDQ86WU2 507 aa17.32■□□□□ 0.36
PFDN1-206ENST00000514611 JDP2Q8WYK2 163 aa17.32■□□□□ 0.36
PFDN1-206ENST00000514611 DBF4Q9UBU7 674 aaPredicted RBP17.32■□□□□ 0.36
PFDN1-206ENST00000514611 SCN4AP35499 1836 aa17.32■□□□□ 0.36
PFDN1-206ENST00000514611 CCDC184Q52MB2 194 aa17.31■□□□□ 0.36
PFDN1-206ENST00000514611 IFFO2Q5TF58 517 aa17.31■□□□□ 0.36
PFDN1-206ENST00000514611 LARGE2Q8N3Y3 721 aa17.31■□□□□ 0.36
PFDN1-206ENST00000514611 PLBD2Q8NHP8 589 aa17.31■□□□□ 0.36
PFDN1-206ENST00000514611 IFT57Q9NWB7 429 aa17.31■□□□□ 0.36
PFDN1-206ENST00000514611 HACL1Q9UJ83 578 aa17.31■□□□□ 0.36
PFDN1-206ENST00000514611 ATP6V0A2Q9Y487 856 aa17.31■□□□□ 0.36
PFDN1-206ENST00000514611 ATP5J2-PTCD1G3V325 749 aa17.3■□□□□ 0.36
PFDN1-206ENST00000514611 EPHX2P34913 555 aa17.3■□□□□ 0.36
PFDN1-206ENST00000514611 ANKRD13DQ6ZTN6 518 aa17.3■□□□□ 0.36
PFDN1-206ENST00000514611 GPC2Q8N158 579 aa17.3■□□□□ 0.36
PFDN1-206ENST00000514611 GJA3Q9Y6H8 435 aa17.3■□□□□ 0.36
PFDN1-206ENST00000514611 ADAMTSL1Q8N6G6 1762 aa17.3■□□□□ 0.36
PFDN1-206ENST00000514611 LTBP1Q14766 1721 aa17.3■□□□□ 0.36
PFDN1-206ENST00000514611 ELL2O00472 640 aaPredicted RBP17.29■□□□□ 0.36
PFDN1-206ENST00000514611 PPIP5K2O43314 1243 aa17.29■□□□□ 0.36
PFDN1-206ENST00000514611 EIF6P56537 245 aaKnown RBP17.29■□□□□ 0.36
PFDN1-206ENST00000514611 AOC3Q16853 763 aa17.29■□□□□ 0.36
PFDN1-206ENST00000514611 GRIPAP1Q4V328 841 aa17.29■□□□□ 0.36
PFDN1-206ENST00000514611 ISCA1Q9BUE6 129 aa17.29■□□□□ 0.36
PFDN1-206ENST00000514611 PASKQ96RG2 1323 aa17.28■□□□□ 0.36
PFDN1-206ENST00000514611 DDX60Q8IY21 1712 aaKnown RBP17.28■□□□□ 0.36
PFDN1-206ENST00000514611 GNAI1P63096 354 aa17.28■□□□□ 0.36
PFDN1-206ENST00000514611 FAM89AQ96GI7 184 aa17.28■□□□□ 0.36
PFDN1-206ENST00000514611 HYPKQ9NX55 129 aa17.28■□□□□ 0.36
PFDN1-206ENST00000514611 COL4A1P02462 1669 aa17.27■□□□□ 0.36
PFDN1-206ENST00000514611 SCNN1DP51172 638 aa17.27■□□□□ 0.36
PFDN1-206ENST00000514611 GRAPQ13588 217 aa17.27■□□□□ 0.36
PFDN1-206ENST00000514611 RTL5Q5HYW3 569 aaPredicted RBP17.27■□□□□ 0.36
PFDN1-206ENST00000514611 DDX46Q7L014 1031 aaKnown RBP17.27■□□□□ 0.36
PFDN1-206ENST00000514611 NIM1KQ8IY84 436 aa17.27■□□□□ 0.36
PFDN1-206ENST00000514611 GRAPLQ8TC17 118 aaPredicted RBP17.27■□□□□ 0.36
PFDN1-206ENST00000514611 TMX4Q9H1E5 349 aaPredicted RBP17.27■□□□□ 0.36
PFDN1-206ENST00000514611 PHAXQ9H814 394 aaKnown RBP17.27■□□□□ 0.36
PFDN1-206ENST00000514611 CREBZFQ9NS37 354 aa17.27■□□□□ 0.36
PFDN1-206ENST00000514611 CALD1Q05682 793 aaKnown RBP17.26■□□□□ 0.35
PFDN1-206ENST00000514611 C8orf58Q8NAV2 365 aa17.26■□□□□ 0.35
PFDN1-206ENST00000514611 MKRN1Q9UHC7 482 aaKnown RBP17.26■□□□□ 0.35
PFDN1-206ENST00000514611 CLEC11AQ9Y240 323 aa17.26■□□□□ 0.35
PFDN1-206ENST00000514611 DUOX1Q9NRD9 1551 aa17.26■□□□□ 0.35
PFDN1-206ENST00000514611 BBOX1O75936 387 aa17.25■□□□□ 0.35
PFDN1-206ENST00000514611 ITGBL1O95965 494 aaPredicted RBP17.25■□□□□ 0.35
PFDN1-206ENST00000514611 MAP1SQ66K74 1059 aaPredicted RBP17.25■□□□□ 0.35
PFDN1-206ENST00000514611 DPP8Q6V1X1 898 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms