RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 FOXO3O43524 673 aa7.47□□□□□ -1.21
CLDND1-228ENST00000513873 WEE1P30291 646 aa7.47□□□□□ -1.21
CLDND1-228ENST00000513873 RHPN1Q8TCX5 695 aa7.47□□□□□ -1.21
CLDND1-228ENST00000513873 NGLY1Q96IV0 654 aa7.47□□□□□ -1.21
CLDND1-228ENST00000513873 RUBCNLQ9H714 662 aa7.47□□□□□ -1.21
CLDND1-228ENST00000513873 SHISA8B8ZZ34 492 aa7.46□□□□□ -1.22
CLDND1-228ENST00000513873 EML1O00423 815 aa7.46□□□□□ -1.22
CLDND1-228ENST00000513873 ITGB7P26010 798 aa7.46□□□□□ -1.22
CLDND1-228ENST00000513873 HIF1AQ16665 826 aa7.46□□□□□ -1.22
CLDND1-228ENST00000513873 ARTNQ5T4W7 220 aa7.46□□□□□ -1.22
CLDND1-228ENST00000513873 C1orf53Q5VUE5 145 aa7.46□□□□□ -1.22
CLDND1-228ENST00000513873 FIGNL1Q6PIW4 674 aa7.46□□□□□ -1.22
CLDND1-228ENST00000513873 ZDHHC1Q8WTX9 485 aa7.46□□□□□ -1.22
CLDND1-228ENST00000513873 EDARADDQ8WWZ3 215 aa7.46□□□□□ -1.22
CLDND1-228ENST00000513873 CLP1Q92989 425 aaKnown RBP7.46□□□□□ -1.22
CLDND1-228ENST00000513873 C2orf49Q9BVC5 232 aaPredicted RBP7.46□□□□□ -1.22
CLDND1-228ENST00000513873 ANKIB1Q9P2G1 1089 aa7.46□□□□□ -1.22
CLDND1-228ENST00000513873 PHF24Q9UPV7 400 aa7.46□□□□□ -1.22
CLDND1-228ENST00000513873 USTQ9Y2C2 406 aa7.46□□□□□ -1.22
CLDND1-228ENST00000513873 GPC6Q9Y625 555 aaPredicted RBP7.46□□□□□ -1.22
CLDND1-228ENST00000513873 ARAP1Q96P48 1450 aa7.45□□□□□ -1.22
CLDND1-228ENST00000513873 C21orf2O43822 256 aa7.45□□□□□ -1.22
CLDND1-228ENST00000513873 ATP2B4P23634 1241 aa7.45□□□□□ -1.22
CLDND1-228ENST00000513873 TXLNAP40222 546 aa7.45□□□□□ -1.22
CLDND1-228ENST00000513873 HIRAP54198 1017 aaPredicted RBP7.45□□□□□ -1.22
CLDND1-228ENST00000513873 B4GALNT3Q6L9W6 998 aa7.45□□□□□ -1.22
CLDND1-228ENST00000513873 NLRP8Q86W28 1048 aa7.45□□□□□ -1.22
CLDND1-228ENST00000513873 PHACTR1Q9C0D0 580 aa7.45□□□□□ -1.22
CLDND1-228ENST00000513873 CEP164Q9UPV0 1460 aa7.44□□□□□ -1.22
CLDND1-228ENST00000513873 A0A1W2PNR3 127 aa7.44□□□□□ -1.22
CLDND1-228ENST00000513873 PTCD1O75127 700 aaKnown RBP7.44□□□□□ -1.22
CLDND1-228ENST00000513873 ALDH16A1Q8IZ83 802 aa7.44□□□□□ -1.22
CLDND1-228ENST00000513873 ZNF295-AS1Q8N0V1 137 aa7.44□□□□□ -1.22
CLDND1-228ENST00000513873 GOLGA6L1Q8N7Z2 621 aa7.44□□□□□ -1.22
CLDND1-228ENST00000513873 CRISPLD1Q9H336 500 aa7.44□□□□□ -1.22
CLDND1-228ENST00000513873 CHRNA4P43681 627 aa7.43□□□□□ -1.22
CLDND1-228ENST00000513873 GATA4P43694 442 aa7.43□□□□□ -1.22
CLDND1-228ENST00000513873 FAM69CQ0P6D2 419 aa7.43□□□□□ -1.22
CLDND1-228ENST00000513873 ZIC5Q96T25 663 aa7.43□□□□□ -1.22
CLDND1-228ENST00000513873 SUV39H2Q9H5I1 410 aa7.43□□□□□ -1.22
CLDND1-228ENST00000513873 CXXC1Q9P0U4 656 aaPredicted RBP7.43□□□□□ -1.22
CLDND1-228ENST00000513873 MTMR7Q9Y216 660 aa7.43□□□□□ -1.22
CLDND1-228ENST00000513873 ATP4AP20648 1035 aa7.42□□□□□ -1.22
CLDND1-228ENST00000513873 SH3PXD2AQ5TCZ1 1133 aa7.42□□□□□ -1.22
CLDND1-228ENST00000513873 CFHR5Q9BXR6 569 aa7.42□□□□□ -1.22
CLDND1-228ENST00000513873 ATXN7O15265 892 aaPredicted RBP7.41□□□□□ -1.22
CLDND1-228ENST00000513873 COBLO75128 1261 aa7.41□□□□□ -1.22
CLDND1-228ENST00000513873 RTN1Q16799 776 aa7.41□□□□□ -1.22
CLDND1-228ENST00000513873 LINC00114Q6XXX2 140 aa7.41□□□□□ -1.22
CLDND1-228ENST00000513873 LRRC69Q6ZNQ3 347 aa7.41□□□□□ -1.22
CLDND1-228ENST00000513873 RETREG2Q8NC44 543 aa7.41□□□□□ -1.22
CLDND1-228ENST00000513873 KLRG1Q96E93 195 aa7.41□□□□□ -1.22
CLDND1-228ENST00000513873 MKNK1Q9BUB5 465 aa7.41□□□□□ -1.22
CLDND1-228ENST00000513873 PCDHGC4Q9Y5F7 938 aa7.41□□□□□ -1.22
CLDND1-228ENST00000513873 TMEM88BA6NKF7 163 aa7.4□□□□□ -1.22
CLDND1-228ENST00000513873 FKBP5Q13451 457 aaPredicted RBP7.4□□□□□ -1.22
CLDND1-228ENST00000513873 OCLNQ16625 522 aa7.4□□□□□ -1.22
CLDND1-228ENST00000513873 POTEAQ6S8J7 498 aa7.4□□□□□ -1.22
CLDND1-228ENST00000513873 COL26A1Q96A83 441 aa7.4□□□□□ -1.22
CLDND1-228ENST00000513873 ZCCHC2Q9C0B9 1178 aaKnown RBP7.4□□□□□ -1.22
CLDND1-228ENST00000513873 RSF1Q96T23 1441 aaPredicted RBP7.4□□□□□ -1.22
CLDND1-228ENST00000513873 KRTAP19-1Q8IUB9 90 aa7.39□□□□□ -1.23
CLDND1-228ENST00000513873 ATXN7L1Q9ULK2 861 aaPredicted RBP7.39□□□□□ -1.23
CLDND1-228ENST00000513873 FANCD2Q9BXW9 1451 aa7.38□□□□□ -1.23
CLDND1-228ENST00000513873 KHNYNO15037 678 aaKnown RBP7.38□□□□□ -1.23
CLDND1-228ENST00000513873 C11orf91Q3C1V1 193 aa7.38□□□□□ -1.23
CLDND1-228ENST00000513873 C16orf46Q6P387 395 aa7.38□□□□□ -1.23
CLDND1-228ENST00000513873 SUSD3Q96L08 255 aa7.38□□□□□ -1.23
CLDND1-228ENST00000513873 CEP63Q96MT8 703 aa7.38□□□□□ -1.23
CLDND1-228ENST00000513873 SSFA2P28290 1259 aa7.37□□□□□ -1.23
CLDND1-228ENST00000513873 DGKZQ13574 1117 aa7.37□□□□□ -1.23
CLDND1-228ENST00000513873 NAA30Q147X3 362 aaPredicted RBP7.37□□□□□ -1.23
CLDND1-228ENST00000513873 SAMD5Q5TGI4 173 aa7.37□□□□□ -1.23
CLDND1-228ENST00000513873 C1orf229Q6ZS94 237 aaPredicted RBP7.37□□□□□ -1.23
CLDND1-228ENST00000513873 DCDC2BA2VCK2 349 aa7.36□□□□□ -1.23
CLDND1-228ENST00000513873 CARNS1A5YM72 827 aa7.36□□□□□ -1.23
CLDND1-228ENST00000513873 ABHD17AQ96GS6 310 aa7.36□□□□□ -1.23
CLDND1-228ENST00000513873 MYO19Q96H55 970 aa7.36□□□□□ -1.23
CLDND1-228ENST00000513873 CHD1O14646 1710 aa7.35□□□□□ -1.23
CLDND1-228ENST00000513873 BNIP3LO60238 219 aa7.35□□□□□ -1.23
CLDND1-228ENST00000513873 FAM157BP0CG42 384 aa7.35□□□□□ -1.23
CLDND1-228ENST00000513873 BMP4P12644 408 aa7.35□□□□□ -1.23
CLDND1-228ENST00000513873 EPB42P16452 691 aa7.35□□□□□ -1.23
CLDND1-228ENST00000513873 FGFR3P22607 806 aa7.35□□□□□ -1.23
CLDND1-228ENST00000513873 BRD2P25440 801 aaKnown RBP7.35□□□□□ -1.23
CLDND1-228ENST00000513873 LAMC2Q13753 1193 aa7.35□□□□□ -1.23
CLDND1-228ENST00000513873 IFT43Q96FT9 208 aa7.35□□□□□ -1.23
CLDND1-228ENST00000513873 HSH2DQ96JZ2 352 aa7.35□□□□□ -1.23
CLDND1-228ENST00000513873 QTRT2Q9H974 415 aaKnown RBP7.35□□□□□ -1.23
CLDND1-228ENST00000513873 KLK14Q9P0G3 267 aa7.35□□□□□ -1.23
CLDND1-228ENST00000513873 URB2Q14146 1524 aaKnown RBP7.35□□□□□ -1.23
CLDND1-228ENST00000513873 TGFBR3LH3BV60 316 aa7.34□□□□□ -1.23
CLDND1-228ENST00000513873 MAPTP10636 758 aaKnown RBP7.34□□□□□ -1.23
CLDND1-228ENST00000513873 ARID4AP29374 1257 aaPredicted RBP7.34□□□□□ -1.23
CLDND1-228ENST00000513873 TNP2Q05952 138 aa7.34□□□□□ -1.23
CLDND1-228ENST00000513873 NEUROD1Q13562 356 aa7.34□□□□□ -1.23
CLDND1-228ENST00000513873 SLCO4C1Q6ZQN7 724 aa7.34□□□□□ -1.23
CLDND1-228ENST00000513873 ZNF280CQ8ND82 737 aa7.34□□□□□ -1.23
CLDND1-228ENST00000513873 C7orf43Q8WVR3 580 aa7.34□□□□□ -1.23
CLDND1-228ENST00000513873 MARK1Q9P0L2 795 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms