RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 LRP10Q7Z4F1 713 aa17.58■□□□□ 0.4
POLR2J3-217ENST00000513438 PSMD1Q99460 953 aa17.58■□□□□ 0.4
POLR2J3-217ENST00000513438 BABAM1Q9NWV8 329 aa17.58■□□□□ 0.4
POLR2J3-217ENST00000513438 FZD9O00144 591 aa17.57■□□□□ 0.4
POLR2J3-217ENST00000513438 NTSR2O95665 410 aa17.57■□□□□ 0.4
POLR2J3-217ENST00000513438 ANXA1P04083 346 aa17.57■□□□□ 0.4
POLR2J3-217ENST00000513438 NEUROD2Q15784 382 aa17.57■□□□□ 0.4
POLR2J3-217ENST00000513438 CC2D2BQ6DHV5 1058 aa17.57■□□□□ 0.4
POLR2J3-217ENST00000513438 PPP1R42Q7Z4L9 355 aa17.57■□□□□ 0.4
POLR2J3-217ENST00000513438 LDHDQ86WU2 507 aa17.57■□□□□ 0.4
POLR2J3-217ENST00000513438 RBM17Q96I25 401 aaKnown RBP17.57■□□□□ 0.4
POLR2J3-217ENST00000513438 HACL1Q9UJ83 578 aa17.57■□□□□ 0.4
POLR2J3-217ENST00000513438 IBTKQ9P2D0 1353 aaPredicted RBP17.56■□□□□ 0.4
POLR2J3-217ENST00000513438 TCERG1O14776 1098 aaKnown RBP17.56■□□□□ 0.4
POLR2J3-217ENST00000513438 LMOD3Q0VAK6 560 aa17.56■□□□□ 0.4
POLR2J3-217ENST00000513438 PROSER3Q2NL68 480 aa17.56■□□□□ 0.4
POLR2J3-217ENST00000513438 PARP10Q53GL7 1025 aa17.56■□□□□ 0.4
POLR2J3-217ENST00000513438 EAPPQ56P03 285 aaPredicted RBP17.56■□□□□ 0.4
POLR2J3-217ENST00000513438 JDP2Q8WYK2 163 aa17.56■□□□□ 0.4
POLR2J3-217ENST00000513438 NECTIN2Q92692 538 aa17.56■□□□□ 0.4
POLR2J3-217ENST00000513438 CRAMP1Q96RY5 1269 aa17.56■□□□□ 0.4
POLR2J3-217ENST00000513438 SCN4AP35499 1836 aa17.56■□□□□ 0.4
POLR2J3-217ENST00000513438 C3orf67Q6ZVT6 689 aa17.55■□□□□ 0.4
POLR2J3-217ENST00000513438 CCDC146Q8IYE0 955 aa17.55■□□□□ 0.4
POLR2J3-217ENST00000513438 NLRP3Q96P20 1036 aa17.55■□□□□ 0.4
POLR2J3-217ENST00000513438 CLEC11AQ9Y240 323 aa17.55■□□□□ 0.4
POLR2J3-217ENST00000513438 EPHX2P34913 555 aa17.54■□□□□ 0.4
POLR2J3-217ENST00000513438 AIMP1Q12904 312 aaKnown RBP17.54■□□□□ 0.4
POLR2J3-217ENST00000513438 SLC10A5Q5PT55 438 aa17.54■□□□□ 0.4
POLR2J3-217ENST00000513438 COPS6Q7L5N1 327 aa17.54■□□□□ 0.4
POLR2J3-217ENST00000513438 UTP14AQ9BVJ6 771 aaKnown RBP17.54■□□□□ 0.4
POLR2J3-217ENST00000513438 RIC1Q4ADV7 1423 aa17.54■□□□□ 0.4
POLR2J3-217ENST00000513438 SNED1Q8TER0 1413 aa17.54■□□□□ 0.4
POLR2J3-217ENST00000513438 RNF123Q5XPI4 1314 aa17.53■□□□□ 0.4
POLR2J3-217ENST00000513438 PASKQ96RG2 1323 aa17.53■□□□□ 0.4
POLR2J3-217ENST00000513438 MYBBP1AQ9BQG0 1328 aaKnown RBP17.53■□□□□ 0.4
POLR2J3-217ENST00000513438 ITGBL1O95965 494 aaPredicted RBP17.53■□□□□ 0.4
POLR2J3-217ENST00000513438 GRIPAP1Q4V328 841 aa17.53■□□□□ 0.4
POLR2J3-217ENST00000513438 SLC51AQ86UW1 340 aa17.53■□□□□ 0.4
POLR2J3-217ENST00000513438 GPC2Q8N158 579 aa17.53■□□□□ 0.4
POLR2J3-217ENST00000513438 CHL1O00533 1208 aa17.52■□□□□ 0.4
POLR2J3-217ENST00000513438 PPEF1O14829 653 aaPredicted RBP17.52■□□□□ 0.4
POLR2J3-217ENST00000513438 EIF6P56537 245 aaKnown RBP17.52■□□□□ 0.4
POLR2J3-217ENST00000513438 KRT24Q2M2I5 525 aa17.52■□□□□ 0.4
POLR2J3-217ENST00000513438 LARGE2Q8N3Y3 721 aa17.52■□□□□ 0.4
POLR2J3-217ENST00000513438 XAGE3Q8WTP9 111 aa17.52■□□□□ 0.4
POLR2J3-217ENST00000513438 RUNDC1Q96C34 613 aa17.52■□□□□ 0.4
POLR2J3-217ENST00000513438 LAS1LQ9Y4W2 734 aaKnown RBP17.52■□□□□ 0.4
POLR2J3-217ENST00000513438 GJA3Q9Y6H8 435 aa17.52■□□□□ 0.4
POLR2J3-217ENST00000513438 PNMA8AQ86V59 439 aaPredicted RBP17.51■□□□□ 0.39
POLR2J3-217ENST00000513438 AIDAQ96BJ3 306 aa17.51■□□□□ 0.39
POLR2J3-217ENST00000513438 TRIM35Q9UPQ4 493 aa17.51■□□□□ 0.39
POLR2J3-217ENST00000513438 WDR43Q15061 677 aaKnown RBP eCLIP17.5■□□□□ 0.39
POLR2J3-217ENST00000513438 HSP90AB3PQ58FF7 597 aa17.5■□□□□ 0.39
POLR2J3-217ENST00000513438 NLRP10Q86W26 655 aa17.5■□□□□ 0.39
POLR2J3-217ENST00000513438 TMX4Q9H1E5 349 aaPredicted RBP17.5■□□□□ 0.39
POLR2J3-217ENST00000513438 DDX21Q9NR30 783 aaKnown RBP eCLIP17.5■□□□□ 0.39
POLR2J3-217ENST00000513438 ADAMTS8Q9UP79 889 aa17.5■□□□□ 0.39
POLR2J3-217ENST00000513438 TMEM88BA6NKF7 163 aa17.49■□□□□ 0.39
POLR2J3-217ENST00000513438 HCLS1P14317 486 aaPredicted RBP17.49■□□□□ 0.39
POLR2J3-217ENST00000513438 TCIRG1Q13488 830 aa17.49■□□□□ 0.39
POLR2J3-217ENST00000513438 MAP1SQ66K74 1059 aaPredicted RBP17.49■□□□□ 0.39
POLR2J3-217ENST00000513438 CNTROBQ8N137 903 aa17.49■□□□□ 0.39
POLR2J3-217ENST00000513438 ATP6V0A2Q9Y487 856 aa17.49■□□□□ 0.39
POLR2J3-217ENST00000513438 CNTNAP1P78357 1384 aa17.49■□□□□ 0.39
POLR2J3-217ENST00000513438 COL4A5P29400 1685 aa17.48■□□□□ 0.39
POLR2J3-217ENST00000513438 FOXN1O15353 648 aa17.48■□□□□ 0.39
POLR2J3-217ENST00000513438 TRMT112Q9UI30 125 aaKnown RBP17.48■□□□□ 0.39
POLR2J3-217ENST00000513438 ABCC4O15439 1325 aa17.47■□□□□ 0.39
POLR2J3-217ENST00000513438 PPIP5K2O43314 1243 aa17.47■□□□□ 0.39
POLR2J3-217ENST00000513438 BBOX1O75936 387 aa17.47■□□□□ 0.39
POLR2J3-217ENST00000513438 LMOD1P29536 600 aaPredicted RBP17.47■□□□□ 0.39
POLR2J3-217ENST00000513438 EPS15P42566 896 aa17.47■□□□□ 0.39
POLR2J3-217ENST00000513438 VEGFBP49765 207 aa17.47■□□□□ 0.39
POLR2J3-217ENST00000513438 NIM1KQ8IY84 436 aa17.47■□□□□ 0.39
POLR2J3-217ENST00000513438 CHPF2Q9P2E5 772 aa17.47■□□□□ 0.39
POLR2J3-217ENST00000513438 AOC3Q16853 763 aa17.46■□□□□ 0.39
POLR2J3-217ENST00000513438 SP8Q8IXZ3 490 aa17.46■□□□□ 0.39
POLR2J3-217ENST00000513438 ZNF428Q96B54 188 aa17.46■□□□□ 0.39
POLR2J3-217ENST00000513438 VPS33BQ9H267 617 aa17.46■□□□□ 0.39
POLR2J3-217ENST00000513438 CTCFP49711 727 aaPredicted RBP17.45■□□□□ 0.38
POLR2J3-217ENST00000513438 SCNN1DP51172 638 aa17.45■□□□□ 0.38
POLR2J3-217ENST00000513438 HDGFL1Q5TGJ6 251 aa17.45■□□□□ 0.38
POLR2J3-217ENST00000513438 ADAMTSL1Q8N6G6 1762 aa17.45■□□□□ 0.38
POLR2J3-217ENST00000513438 ANKRD13DQ6ZTN6 518 aa17.44■□□□□ 0.38
POLR2J3-217ENST00000513438 DDX46Q7L014 1031 aaKnown RBP17.44■□□□□ 0.38
POLR2J3-217ENST00000513438 MPNDQ8N594 471 aa17.44■□□□□ 0.38
POLR2J3-217ENST00000513438 SUPT20HQ8NEM7 779 aa17.44■□□□□ 0.38
POLR2J3-217ENST00000513438 PLBD2Q8NHP8 589 aa17.44■□□□□ 0.38
POLR2J3-217ENST00000513438 RTFDC1Q9BY42 306 aaPredicted RBP17.44■□□□□ 0.38
POLR2J3-217ENST00000513438 PRDM10Q9NQV6 1147 aa17.44■□□□□ 0.38
POLR2J3-217ENST00000513438 SH3TC1Q8TE82 1336 aa17.44■□□□□ 0.38
POLR2J3-217ENST00000513438 HOXB7P09629 217 aa17.43■□□□□ 0.38
POLR2J3-217ENST00000513438 DEFB115Q30KQ5 88 aa17.43■□□□□ 0.38
POLR2J3-217ENST00000513438 DPP8Q6V1X1 898 aaPredicted RBP17.43■□□□□ 0.38
POLR2J3-217ENST00000513438 CFAP44Q96MT7 982 aa17.43■□□□□ 0.38
POLR2J3-217ENST00000513438 DBF4Q9UBU7 674 aaPredicted RBP17.43■□□□□ 0.38
POLR2J3-217ENST00000513438 ZNRF3Q9ULT6 936 aa17.43■□□□□ 0.38
POLR2J3-217ENST00000513438 ANKRD36CQ5JPF3 1778 aa17.43■□□□□ 0.38
POLR2J3-217ENST00000513438 LTBP1Q14766 1721 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms