RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 MYL6BP14649 208 aa14.38□□□□□ -0.11
SKP2-207ENST00000513263 EIF6P56537 245 aaKnown RBP14.38□□□□□ -0.11
SKP2-207ENST00000513263 CRAMP1Q96RY5 1269 aa14.38□□□□□ -0.11
SKP2-207ENST00000513263 VPS33BQ9H267 617 aa14.38□□□□□ -0.11
SKP2-207ENST00000513263 LMOD1P29536 600 aaPredicted RBP14.37□□□□□ -0.11
SKP2-207ENST00000513263 RIPK4P57078 832 aa14.37□□□□□ -0.11
SKP2-207ENST00000513263 ZNF34Q8IZ26 560 aa14.37□□□□□ -0.11
SKP2-207ENST00000513263 NGEFQ8N5V2 710 aa14.37□□□□□ -0.11
SKP2-207ENST00000513263 NLRP3Q96P20 1036 aa14.37□□□□□ -0.11
SKP2-207ENST00000513263 ZBTB3Q9H5J0 574 aa14.37□□□□□ -0.11
SKP2-207ENST00000513263 LRRC37AA6NMS7 1700 aa14.37□□□□□ -0.11
SKP2-207ENST00000513263 UBN2Q6ZU65 1347 aa14.37□□□□□ -0.11
SKP2-207ENST00000513263 PASKQ96RG2 1323 aa14.37□□□□□ -0.11
SKP2-207ENST00000513263 MYBBP1AQ9BQG0 1328 aaKnown RBP14.37□□□□□ -0.11
SKP2-207ENST00000513263 CNTNAP1P78357 1384 aa14.36□□□□□ -0.11
SKP2-207ENST00000513263 PPEF1O14829 653 aaPredicted RBP14.36□□□□□ -0.11
SKP2-207ENST00000513263 NTSR2O95665 410 aa14.36□□□□□ -0.11
SKP2-207ENST00000513263 HSPA1AP0DMV8 641 aaKnown RBP14.36□□□□□ -0.11
SKP2-207ENST00000513263 HSPA1BP0DMV9 641 aaKnown RBP14.36□□□□□ -0.11
SKP2-207ENST00000513263 EPHX2P34913 555 aa14.36□□□□□ -0.11
SKP2-207ENST00000513263 TTLL7Q6ZT98 887 aa14.36□□□□□ -0.11
SKP2-207ENST00000513263 NUTM1Q86Y26 1132 aa14.36□□□□□ -0.11
SKP2-207ENST00000513263 SYNE4Q8N205 404 aa14.36□□□□□ -0.11
SKP2-207ENST00000513263 SUPT20HQ8NEM7 779 aa14.36□□□□□ -0.11
SKP2-207ENST00000513263 ZNF541Q9H0D2 1346 aa14.36□□□□□ -0.11
SKP2-207ENST00000513263 HOXB7P09629 217 aa14.35□□□□□ -0.11
SKP2-207ENST00000513263 GPTP24298 496 aa14.35□□□□□ -0.11
SKP2-207ENST00000513263 EAPPQ56P03 285 aaPredicted RBP14.35□□□□□ -0.11
SKP2-207ENST00000513263 THUMPD2Q9BTF0 503 aaKnown RBP14.35□□□□□ -0.11
SKP2-207ENST00000513263 UTP14AQ9BVJ6 771 aaKnown RBP14.35□□□□□ -0.11
SKP2-207ENST00000513263 TMEM88BA6NKF7 163 aa14.34□□□□□ -0.11
SKP2-207ENST00000513263 TMPOP42166 694 aaKnown RBP14.34□□□□□ -0.11
SKP2-207ENST00000513263 WDR43Q15061 677 aaKnown RBP eCLIP14.34□□□□□ -0.11
SKP2-207ENST00000513263 TMC4Q7Z404 712 aa14.34□□□□□ -0.11
SKP2-207ENST00000513263 TNS4Q8IZW8 715 aa14.34□□□□□ -0.11
SKP2-207ENST00000513263 LARGE2Q8N3Y3 721 aa14.34□□□□□ -0.11
SKP2-207ENST00000513263 CDHR2Q9BYE9 1310 aa14.34□□□□□ -0.11
SKP2-207ENST00000513263 THSD7BQ9C0I4 1608 aa14.33□□□□□ -0.11
SKP2-207ENST00000513263 SUSD4Q5VX71 490 aa14.33□□□□□ -0.12
SKP2-207ENST00000513263 NIM1KQ8IY84 436 aa14.33□□□□□ -0.12
SKP2-207ENST00000513263 CLEC11AQ9Y240 323 aa14.33□□□□□ -0.12
SKP2-207ENST00000513263 POTEIP0CG38 1075 aa14.32□□□□□ -0.12
SKP2-207ENST00000513263 POTEJP0CG39 1038 aa14.32□□□□□ -0.12
SKP2-207ENST00000513263 EIF2S2P20042 333 aaKnown RBP14.32□□□□□ -0.12
SKP2-207ENST00000513263 SLC10A5Q5PT55 438 aa14.32□□□□□ -0.12
SKP2-207ENST00000513263 AIDAQ96BJ3 306 aa14.32□□□□□ -0.12
SKP2-207ENST00000513263 CHMP4AQ9BY43 222 aa14.32□□□□□ -0.12
SKP2-207ENST00000513263 LTBP1Q14766 1721 aa14.32□□□□□ -0.12
SKP2-207ENST00000513263 BBOX1O75936 387 aa14.31□□□□□ -0.12
SKP2-207ENST00000513263 COL13A1Q5TAT6 717 aaPredicted RBP14.31□□□□□ -0.12
SKP2-207ENST00000513263 USP50Q70EL3 339 aaPredicted RBP14.31□□□□□ -0.12
SKP2-207ENST00000513263 LRP10Q7Z4F1 713 aa14.31□□□□□ -0.12
SKP2-207ENST00000513263 RUNDC1Q96C34 613 aa14.31□□□□□ -0.12
SKP2-207ENST00000513263 DDX21Q9NR30 783 aaKnown RBP eCLIP14.31□□□□□ -0.12
SKP2-207ENST00000513263 ATP6V0A2Q9Y487 856 aa14.31□□□□□ -0.12
SKP2-207ENST00000513263 SH3TC1Q8TE82 1336 aa14.31□□□□□ -0.12
SKP2-207ENST00000513263 MYH3P11055 1940 aa14.31□□□□□ -0.12
SKP2-207ENST00000513263 CACNA1FO60840 1977 aa14.31□□□□□ -0.12
SKP2-207ENST00000513263 COL4A5P29400 1685 aa14.3□□□□□ -0.12
SKP2-207ENST00000513263 PPIP5K2O43314 1243 aa14.3□□□□□ -0.12
SKP2-207ENST00000513263 HSP90B1P14625 803 aaKnown RBP14.3□□□□□ -0.12
SKP2-207ENST00000513263 CALD1Q05682 793 aaKnown RBP14.3□□□□□ -0.12
SKP2-207ENST00000513263 OLFM4Q6UX06 510 aa14.3□□□□□ -0.12
SKP2-207ENST00000513263 DDX46Q7L014 1031 aaKnown RBP14.3□□□□□ -0.12
SKP2-207ENST00000513263 MKRN1Q9UHC7 482 aaKnown RBP14.3□□□□□ -0.12
SKP2-207ENST00000513263 ABCC4O15439 1325 aa14.3□□□□□ -0.12
SKP2-207ENST00000513263 TAF1P21675 1872 aa14.29□□□□□ -0.12
SKP2-207ENST00000513263 ITGBL1O95965 494 aaPredicted RBP14.29□□□□□ -0.12
SKP2-207ENST00000513263 PDIA6Q15084 440 aa14.29□□□□□ -0.12
SKP2-207ENST00000513263 CNTROBQ8N137 903 aa14.29□□□□□ -0.12
SKP2-207ENST00000513263 DBF4Q9UBU7 674 aaPredicted RBP14.29□□□□□ -0.12
SKP2-207ENST00000513263 GJA3Q9Y6H8 435 aa14.29□□□□□ -0.12
SKP2-207ENST00000513263 RASSF10A6NK89 507 aa14.28□□□□□ -0.12
SKP2-207ENST00000513263 CHL1O00533 1208 aa14.28□□□□□ -0.12
SKP2-207ENST00000513263 TCIRG1Q13488 830 aa14.28□□□□□ -0.12
SKP2-207ENST00000513263 HDGFL1Q5TGJ6 251 aa14.28□□□□□ -0.12
SKP2-207ENST00000513263 DPP8Q6V1X1 898 aaPredicted RBP14.28□□□□□ -0.12
SKP2-207ENST00000513263 COPS6Q7L5N1 327 aa14.28□□□□□ -0.12
SKP2-207ENST00000513263 NLRP10Q86W26 655 aa14.28□□□□□ -0.12
SKP2-207ENST00000513263 SP8Q8IXZ3 490 aa14.28□□□□□ -0.12
SKP2-207ENST00000513263 RTFDC1Q9BY42 306 aaPredicted RBP14.28□□□□□ -0.12
SKP2-207ENST00000513263 TRMT112Q9UI30 125 aaKnown RBP14.28□□□□□ -0.12
SKP2-207ENST00000513263 PSME4Q14997 1843 aa14.27□□□□□ -0.12
SKP2-207ENST00000513263 SCNN1DP51172 638 aa14.27□□□□□ -0.13
SKP2-207ENST00000513263 GRAPQ13588 217 aa14.27□□□□□ -0.13
SKP2-207ENST00000513263 GRAPLQ8TC17 118 aaPredicted RBP14.27□□□□□ -0.13
SKP2-207ENST00000513263 XAGE3Q8WTP9 111 aa14.27□□□□□ -0.13
SKP2-207ENST00000513263 PRDM10Q9NQV6 1147 aa14.27□□□□□ -0.13
SKP2-207ENST00000513263 ADARB2Q9NS39 739 aaKnown RBP14.27□□□□□ -0.13
SKP2-207ENST00000513263 HYPKQ9NX55 129 aa14.27□□□□□ -0.13
SKP2-207ENST00000513263 ZNRF3Q9ULT6 936 aa14.27□□□□□ -0.13
SKP2-207ENST00000513263 ECE1P42892 770 aa14.26□□□□□ -0.13
SKP2-207ENST00000513263 CTCFP49711 727 aaPredicted RBP14.26□□□□□ -0.13
SKP2-207ENST00000513263 MAP2K1Q02750 393 aaPredicted RBP14.26□□□□□ -0.13
SKP2-207ENST00000513263 TNIP1Q15025 636 aa14.26□□□□□ -0.13
SKP2-207ENST00000513263 PROSER3Q2NL68 480 aa14.26□□□□□ -0.13
SKP2-207ENST00000513263 MAP1SQ66K74 1059 aaPredicted RBP14.26□□□□□ -0.13
SKP2-207ENST00000513263 MPNDQ8N594 471 aa14.26□□□□□ -0.13
SKP2-207ENST00000513263 PLBD2Q8NHP8 589 aa14.26□□□□□ -0.13
SKP2-207ENST00000513263 CFAP44Q96MT7 982 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms