RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 TTLL7Q6ZT98 887 aa6.95□□□□□ -1.3
PROM1-211ENST00000511153 CCDC125Q86Z20 511 aa6.95□□□□□ -1.3
PROM1-211ENST00000511153 TMC2Q8TDI7 906 aa6.95□□□□□ -1.3
PROM1-211ENST00000511153 ZBTB3Q9H5J0 574 aa6.95□□□□□ -1.3
PROM1-211ENST00000511153 PCDH10Q9P2E7 1040 aa6.95□□□□□ -1.3
PROM1-211ENST00000511153 TNNQ9UQP3 1299 aa6.95□□□□□ -1.3
PROM1-211ENST00000511153 COL5A3P25940 1745 aaPredicted RBP6.95□□□□□ -1.3
PROM1-211ENST00000511153 RREB1Q92766 1687 aa6.95□□□□□ -1.3
PROM1-211ENST00000511153 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.95□□□□□ -1.3
PROM1-211ENST00000511153 PLIN1O60240 522 aa6.95□□□□□ -1.3
PROM1-211ENST00000511153 ZBTB7AO95365 584 aa6.95□□□□□ -1.3
PROM1-211ENST00000511153 SLC27A3Q5K4L6 730 aa6.95□□□□□ -1.3
PROM1-211ENST00000511153 IFFO2Q5TF58 517 aa6.95□□□□□ -1.3
PROM1-211ENST00000511153 COL23A1Q86Y22 540 aaPredicted RBP6.95□□□□□ -1.3
PROM1-211ENST00000511153 CCDC24Q8N4L8 307 aa6.95□□□□□ -1.3
PROM1-211ENST00000511153 XAGE3Q8WTP9 111 aa6.95□□□□□ -1.3
PROM1-211ENST00000511153 FRAT1Q92837 279 aaPredicted RBP6.95□□□□□ -1.3
PROM1-211ENST00000511153 LAMB4A4D0S4 1761 aa6.94□□□□□ -1.3
PROM1-211ENST00000511153 PDIA6Q15084 440 aa6.94□□□□□ -1.3
PROM1-211ENST00000511153 SLC15A2Q16348 729 aa6.94□□□□□ -1.3
PROM1-211ENST00000511153 COPS6Q7L5N1 327 aa6.94□□□□□ -1.3
PROM1-211ENST00000511153 TRMT2AQ8IZ69 625 aaKnown RBP6.94□□□□□ -1.3
PROM1-211ENST00000511153 SSH1Q8WYL5 1049 aa6.94□□□□□ -1.3
PROM1-211ENST00000511153 JARID2Q92833 1246 aaPredicted RBP6.94□□□□□ -1.3
PROM1-211ENST00000511153 ARHGEF1Q92888 912 aaKnown RBP6.94□□□□□ -1.3
PROM1-211ENST00000511153 SMC4Q9NTJ3 1288 aa6.94□□□□□ -1.3
PROM1-211ENST00000511153 RTCBQ9Y3I0 505 aaKnown RBP6.94□□□□□ -1.3
PROM1-211ENST00000511153 PNPLA7Q6ZV29 1317 aa6.93□□□□□ -1.3
PROM1-211ENST00000511153 UBR3Q6ZT12 1888 aa6.93□□□□□ -1.3
PROM1-211ENST00000511153 F6X3S4 739 aa6.93□□□□□ -1.3
PROM1-211ENST00000511153 GPTP24298 496 aa6.93□□□□□ -1.3
PROM1-211ENST00000511153 RFC4P35249 363 aa6.93□□□□□ -1.3
PROM1-211ENST00000511153 FOXK1P85037 733 aa6.93□□□□□ -1.3
PROM1-211ENST00000511153 NBR1Q14596 966 aa6.93□□□□□ -1.3
PROM1-211ENST00000511153 HLFQ16534 295 aa6.93□□□□□ -1.3
PROM1-211ENST00000511153 CCDC30Q5VVM6 783 aa6.93□□□□□ -1.3
PROM1-211ENST00000511153 USPL1Q5W0Q7 1092 aa6.93□□□□□ -1.3
PROM1-211ENST00000511153 PLPP6Q8IY26 295 aa6.93□□□□□ -1.3
PROM1-211ENST00000511153 STK31Q9BXU1 1019 aa6.93□□□□□ -1.3
PROM1-211ENST00000511153 EMILIN3Q9NT22 766 aa6.93□□□□□ -1.3
PROM1-211ENST00000511153 BABAM1Q9NWV8 329 aa6.93□□□□□ -1.3
PROM1-211ENST00000511153 SOS1Q07889 1333 aaPredicted RBP6.93□□□□□ -1.3
PROM1-211ENST00000511153 CNTNAP4Q9C0A0 1308 aa6.93□□□□□ -1.3
PROM1-211ENST00000511153 ATP5J2-PTCD1G3V325 749 aa6.92□□□□□ -1.3
PROM1-211ENST00000511153 RPS6KA4O75676 772 aa6.92□□□□□ -1.3
PROM1-211ENST00000511153 IRX6P78412 446 aaPredicted RBP6.92□□□□□ -1.3
PROM1-211ENST00000511153 RTL5Q5HYW3 569 aaPredicted RBP6.92□□□□□ -1.3
PROM1-211ENST00000511153 TRAPPC3LQ5T215 181 aa6.92□□□□□ -1.3
PROM1-211ENST00000511153 SLC4A10Q6U841 1118 aa6.92□□□□□ -1.3
PROM1-211ENST00000511153 NPM2Q86SE8 214 aaKnown RBP6.92□□□□□ -1.3
PROM1-211ENST00000511153 DZIP3Q86Y13 1208 aaKnown RBP6.92□□□□□ -1.3
PROM1-211ENST00000511153 MRPL50Q8N5N7 158 aaKnown RBP6.92□□□□□ -1.3
PROM1-211ENST00000511153 CLUAP1Q96AJ1 413 aa6.92□□□□□ -1.3
PROM1-211ENST00000511153 DDX21Q9NR30 783 aaKnown RBP eCLIP6.92□□□□□ -1.3
PROM1-211ENST00000511153 WWC3Q9ULE0 1092 aa6.92□□□□□ -1.3
PROM1-211ENST00000511153 NOB1Q9ULX3 412 aaKnown RBP6.92□□□□□ -1.3
PROM1-211ENST00000511153 COL15A1P39059 1388 aa6.92□□□□□ -1.3
PROM1-211ENST00000511153 RGPD3A6NKT7 1758 aaPredicted RBP6.92□□□□□ -1.3
PROM1-211ENST00000511153 RGPD4Q7Z3J3 1758 aa6.92□□□□□ -1.3
PROM1-211ENST00000511153 RARSP54136 660 aaKnown RBP6.91□□□□□ -1.3
PROM1-211ENST00000511153 EIF5P55010 431 aaKnown RBP6.91□□□□□ -1.3
PROM1-211ENST00000511153 FKBP5Q13451 457 aaPredicted RBP6.91□□□□□ -1.3
PROM1-211ENST00000511153 CAMK2BQ13554 666 aa6.91□□□□□ -1.3
PROM1-211ENST00000511153 C3orf67Q6ZVT6 689 aa6.91□□□□□ -1.3
PROM1-211ENST00000511153 TEX13AQ9BXU3 409 aaPredicted RBP6.91□□□□□ -1.3
PROM1-211ENST00000511153 DBF4Q9UBU7 674 aaPredicted RBP6.91□□□□□ -1.3
PROM1-211ENST00000511153 RCAN3Q9UKA8 241 aa6.91□□□□□ -1.3
PROM1-211ENST00000511153 GTF3C3Q9Y5Q9 886 aa6.91□□□□□ -1.3
PROM1-211ENST00000511153 C4AP0C0L4 1744 aa6.91□□□□□ -1.3
PROM1-211ENST00000511153 ZPR1O75312 459 aa6.91□□□□□ -1.3
PROM1-211ENST00000511153 FLIIQ13045 1269 aa6.91□□□□□ -1.3
PROM1-211ENST00000511153 KIF6Q6ZMV9 814 aa6.91□□□□□ -1.3
PROM1-211ENST00000511153 RIC3Q7Z5B4 369 aa6.91□□□□□ -1.3
PROM1-211ENST00000511153 MYD88Q99836 296 aa6.91□□□□□ -1.3
PROM1-211ENST00000511153 MAP3K2Q9Y2U5 619 aa6.91□□□□□ -1.3
PROM1-211ENST00000511153 PI4KAP2A4QPH2 592 aa6.9□□□□□ -1.31
PROM1-211ENST00000511153 SEMA3EO15041 775 aa6.9□□□□□ -1.31
PROM1-211ENST00000511153 CAMTA2O94983 1202 aa6.9□□□□□ -1.31
PROM1-211ENST00000511153 IL6STP40189 918 aaPredicted RBP6.9□□□□□ -1.31
PROM1-211ENST00000511153 RC3H1Q5TC82 1133 aaKnown RBP6.9□□□□□ -1.31
PROM1-211ENST00000511153 TBC1D9BQ66K14 1250 aa6.9□□□□□ -1.31
PROM1-211ENST00000511153 LRP10Q7Z4F1 713 aa6.9□□□□□ -1.31
PROM1-211ENST00000511153 PI4KAP1Q8N8J0 262 aa6.9□□□□□ -1.31
PROM1-211ENST00000511153 BCL2L12Q9HB09 334 aa6.9□□□□□ -1.31
PROM1-211ENST00000511153 PPP1R1BQ9UD71 204 aaPredicted RBP6.9□□□□□ -1.31
PROM1-211ENST00000511153 SUPT16HQ9Y5B9 1047 aaKnown RBP6.9□□□□□ -1.31
PROM1-211ENST00000511153 ZNF831Q5JPB2 1677 aa6.89□□□□□ -1.31
PROM1-211ENST00000511153 POTEMA6NI47 508 aa6.89□□□□□ -1.31
PROM1-211ENST00000511153 DPYSL4O14531 572 aa6.89□□□□□ -1.31
PROM1-211ENST00000511153 NPHP1O15259 732 aa6.89□□□□□ -1.31
PROM1-211ENST00000511153 HOXB7P09629 217 aa6.89□□□□□ -1.31
PROM1-211ENST00000511153 GYS1P13807 737 aa6.89□□□□□ -1.31
PROM1-211ENST00000511153 CWF19L2Q2TBE0 894 aaKnown RBP6.89□□□□□ -1.31
PROM1-211ENST00000511153 C20orf194Q5TEA3 1177 aa6.89□□□□□ -1.31
PROM1-211ENST00000511153 SYNE4Q8N205 404 aa6.89□□□□□ -1.31
PROM1-211ENST00000511153 HYPKQ9NX55 129 aa6.89□□□□□ -1.31
PROM1-211ENST00000511153 NUP98P52948 1817 aa6.89□□□□□ -1.31
PROM1-211ENST00000511153 MAP3K15Q6ZN16 1313 aa6.89□□□□□ -1.31
PROM1-211ENST00000511153 USP42Q9H9J4 1324 aaKnown RBP6.89□□□□□ -1.31
PROM1-211ENST00000511153 ADCY9O60503 1353 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms